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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>72435_72435_1_RASAL2-ZNF695_RASAL2_chr1_178063829_ENST00000367649_ZNF695_chr1_247109129_ENST00000487338_length(amino acids)=180AA_BP=129
MHRPSLGQWATGKEVRGVRAGCRSGPCPRCALSSSPYRRQGAEPRASPPRSRRLVPLPPRGTMELSPSSGGAAEALSWPEMFPALESDSP
LPPEDLDAVVPVSGAVAGGMLDRILLESVCQQQSWVRVYGSSRRPSSCFEDPAEVPSLLEHSAWTPCSVRRIYTGSSCVSPSSELKHASH

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>72435_72435_2_RASAL2-ZNF695_RASAL2_chr1_178063829_ENST00000448150_ZNF695_chr1_247109129_ENST00000487338_length(amino acids)=236AA_BP=185
MKKAAPRRWEGEPPLPGSSASSPGRDPHTPEPGPTLGRGHAGSSSRPGSRPPTAGGLHRPSLGQWATGKEVRGVRAGCRSGPCPRCALSS
SPYRRQGAEPRASPPRSRRLVPLPPRGTMELSPSSGGAAEALSWPEMFPALESDSPLPPEDLDAVVPVSGAVAGGMLDRILLESVCQQQS

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