FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>75115_75115_1_RNF4-BTF3_RNF4_chr4_2492229_ENST00000314289_BTF3_chr5_72798313_ENST00000335895_length(amino acids)=169AA_BP=30
MRTFDFPANLGIDHFLFCRKGKAPKSTMSTGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASL

--------------------------------------------------------------

>75115_75115_2_RNF4-BTF3_RNF4_chr4_2492229_ENST00000506706_BTF3_chr5_72798313_ENST00000335895_length(amino acids)=169AA_BP=30
MRTFDFPANLGIDHFLFCRKGKAPKSTMSTGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASL

--------------------------------------------------------------

>75115_75115_3_RNF4-BTF3_RNF4_chr4_2492229_ENST00000509258_BTF3_chr5_72798313_ENST00000335895_length(amino acids)=169AA_BP=30
MRTFDFPANLGIDHFLFCRKGKAPKSTMSTGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASL

--------------------------------------------------------------

>75115_75115_4_RNF4-BTF3_RNF4_chr4_2492229_ENST00000511600_BTF3_chr5_72798313_ENST00000335895_length(amino acids)=212AA_BP=
MPSFQGIRHLFQACEELDNFCWGSVFRMTRVLPRLECSSTVITHSSLNLPGHKRSSHLSLLSNWDYRHVPPHPANFFFSLVLIFCREGVS
PCCPGWSRTPGLKQSCLGFPKCWDYRHEPPCLALELDNFIHSFFFFFFFETKSQSVTQVGVQWRNLGSLQLLPPEFKGFSCLSLLSGRDY

--------------------------------------------------------------

>75115_75115_5_RNF4-BTF3_RNF4_chr4_2492229_ENST00000511859_BTF3_chr5_72798313_ENST00000335895_length(amino acids)=169AA_BP=30
MRTFDFPANLGIDHFLFCRKGKAPKSTMSTGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASL

--------------------------------------------------------------

>75115_75115_6_RNF4-BTF3_RNF4_chr4_2492229_ENST00000541204_BTF3_chr5_72798313_ENST00000335895_length(amino acids)=169AA_BP=30
MRTFDFPANLGIDHFLFCRKGKAPKSTMSTGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASL

--------------------------------------------------------------