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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>78029_78029_1_RPS6KA6-HDX_RPS6KA6_chrX_83441069_ENST00000543399_HDX_chrX_83588850_ENST00000297977_length(amino acids)=137AA_BP=27
MGLSTSAIWKNTRVEIVNPYEVKRKVKKIEIIDDEESDMISNSEVEQVNSFLDYKNEEVKFIENELEIQKQKYFKLQTFVRSLILAMKAD

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>78029_78029_2_RPS6KA6-HDX_RPS6KA6_chrX_83441069_ENST00000543399_HDX_chrX_83588850_ENST00000373177_length(amino acids)=137AA_BP=27
MGLSTSAIWKNTRVEIVNPYEVKRKVKKIEIIDDEESDMISNSEVEQVNSFLDYKNEEVKFIENELEIQKQKYFKLQTFVRSLILAMKAD

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>78029_78029_3_RPS6KA6-HDX_RPS6KA6_chrX_83441069_ENST00000543399_HDX_chrX_83588850_ENST00000506585_length(amino acids)=137AA_BP=27
MGLSTSAIWKNTRVEIVNPYEVKRKVKKIEIIDDEESDMISNSEVEQVNSFLDYKNEEVKFIENELEIQKQKYFKLQTFVRSLILAMKAD

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