FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>79829_79829_1_SDC4-YWHAB_SDC4_chr20_43976964_ENST00000372733_YWHAB_chr20_43532633_ENST00000353703_length(amino acids)=166AA_BP=20
MAPARLFALLLFFVGGVAESELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRL

--------------------------------------------------------------

>79829_79829_2_SDC4-YWHAB_SDC4_chr20_43976965_ENST00000372733_YWHAB_chr20_43532634_ENST00000353703_length(amino acids)=166AA_BP=20
MAPARLFALLLFFVGGVAESELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRL

--------------------------------------------------------------