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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>80116_80116_1_SEC31A-PTEN_SEC31A_chr4_83799881_ENST00000355196_PTEN_chr10_89725042_ENST00000371953_length(amino acids)=195AA_BP=134
MKLKEVDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTNASLEIFELDLSDPSLDMKSCATFSSSHRYHKLIWGPYKMDSKGDVSGVLI
AGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQVKLYFTKTVEEPSNPEASSSTSVTPDVSDNEPDHYRYSDTTDSDPE

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