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 Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >81009_81009_1_SF1-FUS_SF1_chr11_64543970_ENST00000227503_FUS_chr16_31199646_ENST00000254108_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_2_SF1-FUS_SF1_chr11_64543970_ENST00000227503_FUS_chr16_31199646_ENST00000380244_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_3_SF1-FUS_SF1_chr11_64543970_ENST00000227503_FUS_chr16_31199646_ENST00000568685_length(amino acids)=314AA_BP=170 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSAEQDNSDNNTIFVQGLGENVTIESVA DYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPM GRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRG -------------------------------------------------------------- >81009_81009_4_SF1-FUS_SF1_chr11_64543970_ENST00000334944_FUS_chr16_31199646_ENST00000254108_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_5_SF1-FUS_SF1_chr11_64543970_ENST00000334944_FUS_chr16_31199646_ENST00000380244_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_6_SF1-FUS_SF1_chr11_64543970_ENST00000334944_FUS_chr16_31199646_ENST00000568685_length(amino acids)=314AA_BP=170 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSAEQDNSDNNTIFVQGLGENVTIESVA DYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPM GRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRG -------------------------------------------------------------- >81009_81009_7_SF1-FUS_SF1_chr11_64543970_ENST00000377387_FUS_chr16_31199646_ENST00000254108_length(amino acids)=438AA_BP=294 MATGANATPLGKLGPPGLPPLPGPKGGFEPGPPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPP SPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGP RDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKE FSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCK -------------------------------------------------------------- >81009_81009_8_SF1-FUS_SF1_chr11_64543970_ENST00000377387_FUS_chr16_31199646_ENST00000380244_length(amino acids)=438AA_BP=294 MATGANATPLGKLGPPGLPPLPGPKGGFEPGPPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPP SPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGP RDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKE FSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCK -------------------------------------------------------------- >81009_81009_9_SF1-FUS_SF1_chr11_64543970_ENST00000377387_FUS_chr16_31199646_ENST00000568685_length(amino acids)=439AA_BP=295 MATGANATPLGKLGPPGLPPLPGPKGGFEPGPPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPP SPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGP RDQGSRHDSAEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGK EFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQC -------------------------------------------------------------- >81009_81009_10_SF1-FUS_SF1_chr11_64543970_ENST00000377390_FUS_chr16_31199646_ENST00000254108_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_11_SF1-FUS_SF1_chr11_64543970_ENST00000377390_FUS_chr16_31199646_ENST00000380244_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_12_SF1-FUS_SF1_chr11_64543970_ENST00000377390_FUS_chr16_31199646_ENST00000568685_length(amino acids)=314AA_BP=170 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSAEQDNSDNNTIFVQGLGENVTIESVA DYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPM GRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRG -------------------------------------------------------------- >81009_81009_13_SF1-FUS_SF1_chr11_64543970_ENST00000377394_FUS_chr16_31199646_ENST00000254108_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_14_SF1-FUS_SF1_chr11_64543970_ENST00000377394_FUS_chr16_31199646_ENST00000380244_length(amino acids)=313AA_BP=169 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVAD YFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMG RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGG -------------------------------------------------------------- >81009_81009_15_SF1-FUS_SF1_chr11_64543970_ENST00000377394_FUS_chr16_31199646_ENST00000568685_length(amino acids)=314AA_BP=170 MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIGPRDQGSRHDSAEQDNSDNNTIFVQGLGENVTIESVA DYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPM GRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRG -------------------------------------------------------------- |
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