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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>81100_81100_1_SFMBT1-RFT1_SFMBT1_chr3_52977369_ENST00000296295_RFT1_chr3_53133502_ENST00000296292_length(amino acids)=308AA_BP=134
MFWEDIACLYAVEMNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVRTDPETYWVATVITTCE
QLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGPVLLRSYCLYVLLLAINGVTECFTFAAMSKEEVDRYNFVMLALSS
SFLVLSYLLTRWCGSVGFILANCFNMGIRITQSLCFIHRYYRRSPHRPLAGLHLSPVLLGTFALSGGVTAVSEVFLCCEQGWPARLAHIA

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>81100_81100_2_SFMBT1-RFT1_SFMBT1_chr3_52977369_ENST00000296295_RFT1_chr3_53133502_ENST00000394738_length(amino acids)=308AA_BP=134
MFWEDIACLYAVEMNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVRTDPETYWVATVITTCE
QLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGPVLLRSYCLYVLLLAINGVTECFTFAAMSKEEVDRYNFVMLALSS
SFLVLSYLLTRWCGSVGFILANCFNMGIRITQSLCFIHRYYRRSPHRPLAGLHLSPVLLGTFALSGGVTAVSEVFLCCEQGWPARLAHIA

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>81100_81100_3_SFMBT1-RFT1_SFMBT1_chr3_52977369_ENST00000394752_RFT1_chr3_53133502_ENST00000296292_length(amino acids)=308AA_BP=134
MFWEDIACLYAVEMNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVRTDPETYWVATVITTCE
QLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGPVLLRSYCLYVLLLAINGVTECFTFAAMSKEEVDRYNFVMLALSS
SFLVLSYLLTRWCGSVGFILANCFNMGIRITQSLCFIHRYYRRSPHRPLAGLHLSPVLLGTFALSGGVTAVSEVFLCCEQGWPARLAHIA

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>81100_81100_4_SFMBT1-RFT1_SFMBT1_chr3_52977369_ENST00000394752_RFT1_chr3_53133502_ENST00000394738_length(amino acids)=308AA_BP=134
MFWEDIACLYAVEMNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVRTDPETYWVATVITTCE
QLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGPVLLRSYCLYVLLLAINGVTECFTFAAMSKEEVDRYNFVMLALSS
SFLVLSYLLTRWCGSVGFILANCFNMGIRITQSLCFIHRYYRRSPHRPLAGLHLSPVLLGTFALSGGVTAVSEVFLCCEQGWPARLAHIA

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