FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>81873_81873_1_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000292055_PPP1R1B_chr17_37785423_ENST00000254079_length(amino acids)=210AA_BP=33
MPARIGYYEIDRTIGKGNFAVVKRATHLVTKAKIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQR
IAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESER

--------------------------------------------------------------

>81873_81873_2_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000292055_PPP1R1B_chr17_37785423_ENST00000579000_length(amino acids)=177AA_BP=33
MPARIGYYEIDRTIGKGNFAVVKRATHLVTKAKIRRRRPTPAMLFRLSEHSSPAVQRIAESHLQSISNLNENQASEEEDELGELRELGYP

--------------------------------------------------------------

>81873_81873_3_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000292055_PPP1R1B_chr17_37785423_ENST00000580825_length(amino acids)=210AA_BP=33
MPARIGYYEIDRTIGKGNFAVVKRATHLVTKAKIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQR
IAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESER

--------------------------------------------------------------

>81873_81873_4_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000375300_PPP1R1B_chr17_37785423_ENST00000254079_length(amino acids)=268AA_BP=7
MAAAAASGAGGAAGAGTGGAGPAGRLLPPPAPGSPAAPAAVSPAAGQPRPPAPASRGPMPARIGYYEIDRTIGKGNFAVVKRATHLVTKA
KIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGY

--------------------------------------------------------------

>81873_81873_5_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000375300_PPP1R1B_chr17_37785423_ENST00000579000_length(amino acids)=235AA_BP=7
MAAAAASGAGGAAGAGTGGAGPAGRLLPPPAPGSPAAPAAVSPAAGQPRPPAPASRGPMPARIGYYEIDRTIGKGNFAVVKRATHLVTKA
KIRRRRPTPAMLFRLSEHSSPAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSA

--------------------------------------------------------------

>81873_81873_6_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000375300_PPP1R1B_chr17_37785423_ENST00000580825_length(amino acids)=268AA_BP=7
MAAAAASGAGGAAGAGTGGAGPAGRLLPPPAPGSPAAPAAVSPAAGQPRPPAPASRGPMPARIGYYEIDRTIGKGNFAVVKRATHLVTKA
KIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELRELGY

--------------------------------------------------------------

>81873_81873_7_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000446921_PPP1R1B_chr17_37785423_ENST00000254079_length(amino acids)=272AA_BP=11
MHNKMAAAAASGAGGAAGAGTGGAGPAGRLLPPPAPGSPAAPAAVSPAAGQPRPPAPASRGPMPARIGYYEIDRTIGKGNFAVVKRATHL
VTKAKIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELR
ELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEP

--------------------------------------------------------------

>81873_81873_8_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000446921_PPP1R1B_chr17_37785423_ENST00000579000_length(amino acids)=239AA_BP=11
MHNKMAAAAASGAGGAAGAGTGGAGPAGRLLPPPAPGSPAAPAAVSPAAGQPRPPAPASRGPMPARIGYYEIDRTIGKGNFAVVKRATHL
VTKAKIRRRRPTPAMLFRLSEHSSPAVQRIAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVI

--------------------------------------------------------------

>81873_81873_9_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000446921_PPP1R1B_chr17_37785423_ENST00000580825_length(amino acids)=272AA_BP=11
MHNKMAAAAASGAGGAAGAGTGGAGPAGRLLPPPAPGSPAAPAAVSPAAGQPRPPAPASRGPMPARIGYYEIDRTIGKGNFAVVKRATHL
VTKAKIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQRIAESHLQSISNLNENQASEEEDELGELR
ELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESERDGGSEDQVEDPALSEPGEEPQRPSPSEP

--------------------------------------------------------------

>81873_81873_10_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000542607_PPP1R1B_chr17_37785423_ENST00000254079_length(amino acids)=210AA_BP=33
MPARIGYYEIDRTIGKGNFAVVKRATHLVTKAKIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQR
IAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESER

--------------------------------------------------------------

>81873_81873_11_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000542607_PPP1R1B_chr17_37785423_ENST00000579000_length(amino acids)=177AA_BP=33
MPARIGYYEIDRTIGKGNFAVVKRATHLVTKAKIRRRRPTPAMLFRLSEHSSPAVQRIAESHLQSISNLNENQASEEEDELGELRELGYP

--------------------------------------------------------------

>81873_81873_12_SIK3-PPP1R1B_SIK3_chr11_116968859_ENST00000542607_PPP1R1B_chr17_37785423_ENST00000580825_length(amino acids)=210AA_BP=33
MPARIGYYEIDRTIGKGNFAVVKRATHLVTKAKIRRRRPTPAMLFRLSEHSSPEEEASPHQRASGEGHHLKSKRPNPCAYTPPSLKAVQR
IAESHLQSISNLNENQASEEEDELGELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPLDESER

--------------------------------------------------------------