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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>82545_82545_1_SLC25A12-STAG2_SLC25A12_chr2_172725191_ENST00000392592_STAG2_chrX_123227868_ENST00000218089_length(amino acids)=145AA_BP=70
MAVKVQTTKRGDPHELRNIFLQYASTEVDGERYMTPEDFVQRYLGLYNDPNSNPKIVQLLAGVADQTKDGRRGTSLMEDDEEPIVEDVMM

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>82545_82545_2_SLC25A12-STAG2_SLC25A12_chr2_172725191_ENST00000422440_STAG2_chrX_123227868_ENST00000218089_length(amino acids)=145AA_BP=70
MAVKVQTTKRGDPHELRNIFLQYASTEVDGERYMTPEDFVQRYLGLYNDPNSNPKIVQLLAGVADQTKDGRRGTSLMEDDEEPIVEDVMM

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