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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>8429_8429_1_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000377617_MTAP_chr9_21859301_ENST00000380172_length(amino acids)=259AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_2_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000377617_MTAP_chr9_21859301_ENST00000460874_length(amino acids)=259AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_3_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000377617_MTAP_chr9_21859301_ENST00000580900_length(amino acids)=259AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_4_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000550104_MTAP_chr9_21859301_ENST00000380172_length(amino acids)=259AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_5_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000550104_MTAP_chr9_21859301_ENST00000460874_length(amino acids)=259AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_6_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000550104_MTAP_chr9_21859301_ENST00000580900_length(amino acids)=259AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_7_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000608853_MTAP_chr9_21859301_ENST00000380172_length(amino acids)=189AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

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>8429_8429_8_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000608853_MTAP_chr9_21859301_ENST00000460874_length(amino acids)=189AA_BP=
MPRPGLPPPEVAATTEEGAVAEDEETEDEDGEGAAAGDARRPLPPGLRTLAAAGGGCCCCCCCCCCCCCCCCCCCCCCWGFSDMVRGPYT
GSHAGRGQPGAGRAKETPERGGDARAPSGEARVGAAGGAPGLARGRRRTTKGRGGPPRPRSRREPGRNAPPPLPLLPKQSEAEGGELCRE

--------------------------------------------------------------

>8429_8429_9_ATXN2-MTAP_ATXN2_chr12_112036587_ENST00000608853_MTAP_chr9_21859301_ENST00000580900_length(amino acids)=202AA_BP=20
MSPPGVRAGVWAPHHVAEAPAAAAAAAAAAAAATAAAAAAAAAAARGCQCPQARRQRPSSVARRRAFAVLVLGLLVLGHGSLLGGRGDLR
RREARPGQVSVDRVLKTLKENANKAKSLLLTTIPQIGSTEWSETLHNLKMIKFQMILSEGYHPFNIQESPFYRGLLDFPSVGHGRGEILP

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