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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>85359_85359_1_SOX7-MSRA_SOX7_chr8_10689175_ENST00000553390_MSRA_chr8_10065343_ENST00000317173_length(amino acids)=315AA_BP=127
MILLESPARPVAAVTQVQRRRYHRLSDMSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNN
HLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYT
SNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGP

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>85359_85359_2_SOX7-MSRA_SOX7_chr8_10689175_ENST00000553390_MSRA_chr8_10065343_ENST00000441698_length(amino acids)=275AA_BP=127
MILLESPARPVAAVTQVQRRRYHRLSDMSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNN
HLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEHMSFEELLKVFWEN
HDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCP

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>85359_85359_3_SOX7-MSRA_SOX7_chr8_10689175_ENST00000553390_MSRA_chr8_10065343_ENST00000518255_length(amino acids)=293AA_BP=127
MILLESPARPVAAVTQVQRRRYHRLSDMSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNN
HLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYT
SNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKLVLPCSSSA

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>85359_85359_4_SOX7-MSRA_SOX7_chr8_10689175_ENST00000554914_MSRA_chr8_10065343_ENST00000317173_length(amino acids)=315AA_BP=127
MILLESPARPVAAVTQVQRRRYHRLSDMSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNN
HLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYT
SNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGP

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>85359_85359_5_SOX7-MSRA_SOX7_chr8_10689175_ENST00000554914_MSRA_chr8_10065343_ENST00000441698_length(amino acids)=275AA_BP=127
MILLESPARPVAAVTQVQRRRYHRLSDMSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNN
HLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTAKHHVNGNRTVEPFPEGTQMAVFEKTGHAEVVRVVYQPEHMSFEELLKVFWEN
HDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCP

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>85359_85359_6_SOX7-MSRA_SOX7_chr8_10689175_ENST00000554914_MSRA_chr8_10065343_ENST00000518255_length(amino acids)=293AA_BP=127
MILLESPARPVAAVTQVQRRRYHRLSDMSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNN
HLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYT
SNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKLVLPCSSSA

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