FusionNeoAntigen Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>8622_8622_1_B2M-CDK2AP1_B2M_chr15_45003811_ENST00000544417_CDK2AP1_chr12_123751829_ENST00000261692_length(amino acids)=119AA_BP=23
MSRSVALAVLALLSLSGLEAIQPGSVHSPSTSMATSSQYRQLLSDYGPPSLGYTQGTGNSQVPQSKYAELLAIIEELGKEIRPTYAGSKS

--------------------------------------------------------------

>8622_8622_2_B2M-CDK2AP1_B2M_chr15_45003811_ENST00000558401_CDK2AP1_chr12_123751829_ENST00000261692_length(amino acids)=132AA_BP=36
MAGIPEADSIRAEMSRSVALAVLALLSLSGLEAIQPGSVHSPSTSMATSSQYRQLLSDYGPPSLGYTQGTGNSQVPQSKYAELLAIIEEL

--------------------------------------------------------------

>8622_8622_3_B2M-CDK2AP1_B2M_chr15_45003811_ENST00000559916_CDK2AP1_chr12_123751829_ENST00000261692_length(amino acids)=119AA_BP=23
MSRSVALAVLALLSLSGLEAIQPGSVHSPSTSMATSSQYRQLLSDYGPPSLGYTQGTGNSQVPQSKYAELLAIIEELGKEIRPTYAGSKS

--------------------------------------------------------------