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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>86619_86619_1_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000373795_CREB5_chr7_28843816_ENST00000357727_length(amino acids)=273AA_BP=1
MKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA
HHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNM
QLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLN

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>86619_86619_2_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000373795_CREB5_chr7_28843816_ENST00000396298_length(amino acids)=287AA_BP=1
MLSFPMTSPRPSSSVCSGWQLPGSVPEISAASRPDPRLPPFAGAPLWAGVAVLSGLAASVVLLVKPVLGCRCAGADVARSGDVLGVHEGG
NGSGDVDGSAGDGVEGEDGVLGAGAGVGKGDGVAVSGADAGASACDGVASGPAGSPSSPSCVPWCSCSHLTWQQGGESMQPSTSVLQIHL
QDLPVALKEALHIALPGLVAQAADVHPRHPGNGSDGWPRPQPPLGGGGQSESTAAAAAAATGGRRDGRSRTPATYASTQLASARFHFPRP

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>86619_86619_3_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000373795_CREB5_chr7_28843816_ENST00000396299_length(amino acids)=287AA_BP=1
MLSFPMTSPRPSSSVCSGWQLPGSVPEISAASRPDPRLPPFAGAPLWAGVAVLSGLAASVVLLVKPVLGCRCAGADVARSGDVLGVHEGG
NGSGDVDGSAGDGVEGEDGVLGAGAGVGKGDGVAVSGADAGASACDGVASGPAGSPSSPSCVPWCSCSHLTWQQGGESMQPSTSVLQIHL
QDLPVALKEALHIALPGLVAQAADVHPRHPGNGSDGWPRPQPPLGGGGQSESTAAAAAAATGGRRDGRSRTPATYASTQLASARFHFPRP

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>86619_86619_4_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000373795_CREB5_chr7_28843816_ENST00000396300_length(amino acids)=287AA_BP=1
MLSFPMTSPRPSSSVCSGWQLPGSVPEISAASRPDPRLPPFAGAPLWAGVAVLSGLAASVVLLVKPVLGCRCAGADVARSGDVLGVHEGG
NGSGDVDGSAGDGVEGEDGVLGAGAGVGKGDGVAVSGADAGASACDGVASGPAGSPSSPSCVPWCSCSHLTWQQGGESMQPSTSVLQIHL
QDLPVALKEALHIALPGLVAQAADVHPRHPGNGSDGWPRPQPPLGGGGQSESTAAAAAAATGGRRDGRSRTPATYASTQLASARFHFPRP

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>86619_86619_5_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000373795_CREB5_chr7_28843816_ENST00000409603_length(amino acids)=287AA_BP=1
MLSFPMTSPRPSSSVCSGWQLPGSVPEISAASRPDPRLPPFAGAPLWAGVAVLSGLAASVVLLVKPVLGCRCAGADVARSGDVLGVHEGG
NGSGDVDGSAGDGVEGEDGVLGAGAGVGKGDGVAVSGADAGASACDGVASGPAGSPSSPSCVPWCSCSHLTWQQGGESMQPSTSVLQIHL
QDLPVALKEALHIALPGLVAQAADVHPRHPGNGSDGWPRPQPPLGGGGQSESTAAAAAAATGGRRDGRSRTPATYASTQLASARFHFPRP

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>86619_86619_6_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000546138_CREB5_chr7_28843816_ENST00000357727_length(amino acids)=273AA_BP=1
MKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA
HHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNM
QLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLN

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>86619_86619_7_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000546138_CREB5_chr7_28843816_ENST00000396298_length(amino acids)=273AA_BP=1
MKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA
HHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNM
QLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLN

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>86619_86619_8_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000546138_CREB5_chr7_28843816_ENST00000396299_length(amino acids)=273AA_BP=1
MKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA
HHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNM
QLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLN

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>86619_86619_9_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000546138_CREB5_chr7_28843816_ENST00000396300_length(amino acids)=273AA_BP=1
MKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA
HHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNM
QLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLN

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>86619_86619_10_SRSF4-CREB5_SRSF4_chr1_29508158_ENST00000546138_CREB5_chr7_28843816_ENST00000409603_length(amino acids)=273AA_BP=1
MKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA
HHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNM
QLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLN

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