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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>86717_86717_1_SSBP2-RPS23_SSBP2_chr5_81046800_ENST00000320672_RPS23_chr5_81573671_ENST00000510210_length(amino acids)=159AA_BP=27
MLSAQACTAKARVTAAPSRPTARPGRSKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSA

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>86717_86717_2_SSBP2-RPS23_SSBP2_chr5_81046800_ENST00000505980_RPS23_chr5_81573671_ENST00000510210_length(amino acids)=118AA_BP=
MLLIYLLTGVSYIRFKAEGSQLHFNHATVSMKTLKADSRNITNSMTFATKSSNQNFIIFLNKVQATVIGYKGCDFLAILDQLDPYTLPNG

--------------------------------------------------------------

>86717_86717_3_SSBP2-RPS23_SSBP2_chr5_81046800_ENST00000509053_RPS23_chr5_81573671_ENST00000510210_length(amino acids)=118AA_BP=
MLLIYLLTGVSYIRFKAEGSQLHFNHATVSMKTLKADSRNITNSMTFATKSSNQNFIIFLNKVQATVIGYKGCDFLAILDQLDPYTLPNG

--------------------------------------------------------------

>86717_86717_4_SSBP2-RPS23_SSBP2_chr5_81046800_ENST00000514493_RPS23_chr5_81573671_ENST00000510210_length(amino acids)=159AA_BP=27
MLSAQACTAKARVTAAPSRPTARPGRSKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSA

--------------------------------------------------------------

>86717_86717_5_SSBP2-RPS23_SSBP2_chr5_81046800_ENST00000515395_RPS23_chr5_81573671_ENST00000510210_length(amino acids)=159AA_BP=27
MLSAQACTAKARVTAAPSRPTARPGRSKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSA

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