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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>88240_88240_1_SUZ12-IARS_SUZ12_chr17_30264539_ENST00000322652_IARS_chr9_94985771_ENST00000375643_length(amino acids)=281AA_BP=7
MRRHFFFPPSFPPLLLPSLPLSSPLSSFPPRSAGACWGERLVLQALALRGRPAGSWRGEEAGTAMAPQKHGGGGGGGSGPSAGSGGGGFG
GSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAVLPVKKPKMEHVQADHELFLQAFEKIQNQTDLLSLSGKTLCVTAGSAPS
LINSSSTLLCQYINLQLLNAKPQECLMGTVGTLLLENPLGQNGLTHQGLLYEAAKVFGLRSRKLKLFLNETQTQEITEDIPVKTLNMKTV

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>88240_88240_2_SUZ12-IARS_SUZ12_chr17_30264539_ENST00000580398_IARS_chr9_94985771_ENST00000375643_length(amino acids)=241AA_BP=10
MVLQALALRGRPAGSWRGEEAGTAMAPQKHGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGA
AVLPVKKPKMEHVQADHELFLQAFEKIQNQTDLLSLSGKTLCVTAGSAPSLINSSSTLLCQYINLQLLNAKPQECLMGTVGTLLLENPLG

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