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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>89835_89835_1_TCHP-IFT81_TCHP_chr12_110346742_ENST00000312777_IFT81_chr12_110641669_ENST00000242591_length(amino acids)=466AA_BP=1
MVQRLIHWRLYGSGKKMALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTSYQRSMHAYQREKMKE
EKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPKLREMELDLHQKHVVN
SWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDKLQAEALLQQMEELKLKEVEATKLKKEQENLLKQRWELERL
EEERKQMEAFRQKAELGRFLRHQYNAQLSRRTQQIQEELELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLREECLQEESRYHYTNCM
IKNLEVQLRRATDEMKAYISSDQQEKRKAIREQYTKNTAEQENLGKKLREKQKVIRESHGPNMKQAKMWRDLEQLMECKKQCFLKQQSQT

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>89835_89835_2_TCHP-IFT81_TCHP_chr12_110346742_ENST00000312777_IFT81_chr12_110641669_ENST00000552912_length(amino acids)=466AA_BP=1
MVQRLIHWRLYGSGKKMALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTSYQRSMHAYQREKMKE
EKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPKLREMELDLHQKHVVN
SWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDKLQAEALLQQMEELKLKEVEATKLKKEQENLLKQRWELERL
EEERKQMEAFRQKAELGRFLRHQYNAQLSRRTQQIQEELELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLREECLQEESRYHYTNCM
IKNLEVQLRRATDEMKAYISSDQQEKRKAIREQYTKNTAEQENLGKKLREKQKVIRESHGPNMKQAKMWRDLEQLMECKKQCFLKQQSQT

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>89835_89835_3_TCHP-IFT81_TCHP_chr12_110346742_ENST00000405876_IFT81_chr12_110641669_ENST00000242591_length(amino acids)=481AA_BP=1
MGITPGDWPARFVPAGSRAGGLFGNSEPQRNMALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTS
YQRSMHAYQREKMKEEKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPK
LREMELDLHQKHVVNSWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDKLQAEALLQQMEELKLKEVEATKLKK
EQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQYNAQLSRRTQQIQEELELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLRE
ECLQEESRYHYTNCMIKNLEVQLRRATDEMKAYISSDQQEKRKAIREQYTKNTAEQENLGKKLREKQKVIRESHGPNMKQAKMWRDLEQL

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>89835_89835_4_TCHP-IFT81_TCHP_chr12_110346742_ENST00000405876_IFT81_chr12_110641669_ENST00000552912_length(amino acids)=481AA_BP=1
MGITPGDWPARFVPAGSRAGGLFGNSEPQRNMALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTS
YQRSMHAYQREKMKEEKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPK
LREMELDLHQKHVVNSWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDKLQAEALLQQMEELKLKEVEATKLKK
EQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQYNAQLSRRTQQIQEELELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLRE
ECLQEESRYHYTNCMIKNLEVQLRRATDEMKAYISSDQQEKRKAIREQYTKNTAEQENLGKKLREKQKVIRESHGPNMKQAKMWRDLEQL

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