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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>91236_91236_1_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000298972_length(amino acids)=689AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSEPPLSP

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>91236_91236_2_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000341669_length(amino acids)=705AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSEPPLSP

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>91236_91236_3_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000350228_length(amino acids)=634AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSDNCKEVVITGYTQAEA

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>91236_91236_4_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000393288_length(amino acids)=694AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSEPPLSP

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>91236_91236_5_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000540018_length(amino acids)=659AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSGYEKSRSLNNIAGLAG

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>91236_91236_6_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000548513_length(amino acids)=689AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSEPPLSP

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>91236_91236_7_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000549446_length(amino acids)=714AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSEPPLSP

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>91236_91236_8_TM7SF3-KCNC2_TM7SF3_chr12_27148170_ENST00000343028_KCNC2_chr12_75445097_ENST00000550433_length(amino acids)=705AA_BP=303
LGVRCRKRKPLAGARSSAGRAPAAAELAGAKRLHLAGDGARCGRPGIAWARLRGPGAHARTSPQPWRGPSPAQAAMGFLQLLVVAVLASE
HRVAGAAEVFGNSSEGLIEFSVGKFRYFELNRPFPEEAILHDISSNVTFLIFQIHSQYQNTTVSFSPTLLSNSSETGTASGLVFILRPEQ
STCTWYLGTSGIQPVQNMAILLSYSERDPVPGGCNLEFDLDIDPNIYLEYNFFETTIKFAPANLGYARGVDPPPCDAGTDQDSRWRLQYD
VYQYFLPENDLTEEMLLKHLQRMVSVPQVKASALKFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSVVLQYEIETDPALTY
VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT
LRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLT
IAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNRLLEHNRSVLSGDDSTGSEPPLSP

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