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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>96853_96853_1_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000453304_VTA1_chr6_142519575_ENST00000367621_length(amino acids)=358AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

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>96853_96853_2_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000453304_VTA1_chr6_142519575_ENST00000367630_length(amino acids)=358AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

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>96853_96853_3_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000453304_VTA1_chr6_142519575_ENST00000452973_length(amino acids)=331AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

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>96853_96853_4_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000504962_VTA1_chr6_142519575_ENST00000367621_length(amino acids)=358AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

--------------------------------------------------------------

>96853_96853_5_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000504962_VTA1_chr6_142519575_ENST00000367630_length(amino acids)=358AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

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>96853_96853_6_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000504962_VTA1_chr6_142519575_ENST00000452973_length(amino acids)=331AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

--------------------------------------------------------------

>96853_96853_7_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000506749_VTA1_chr6_142519575_ENST00000367621_length(amino acids)=358AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

--------------------------------------------------------------

>96853_96853_8_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000506749_VTA1_chr6_142519575_ENST00000367630_length(amino acids)=358AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

--------------------------------------------------------------

>96853_96853_9_UNC5C-VTA1_UNC5C_chr4_96256560_ENST00000506749_VTA1_chr6_142519575_ENST00000452973_length(amino acids)=331AA_BP=224
MRLLLLLGGAAEVAALRLPGLPKWGQSSRSRETSVRRHWERGTFKLLLGVSSPPPFGPCLWRKWSVALGCRYFFGLLRGARIQLLPSGAF
SCLRVSLSPSPPPGTPLSTMRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDDFFHELPETFPSDPPEPLPHFLIEPEEA
YIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHIVDERVDETSDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAH

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