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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>98047_98047_1_VEZF1-CASP3_VEZF1_chr17_56057964_ENST00000581208_CASP3_chr4_185550655_ENST00000308394_length(amino acids)=401AA_BP=326
MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLR
RHESCHTGIKLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAF
ATKDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKSYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHIL

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>98047_98047_2_VEZF1-CASP3_VEZF1_chr17_56057964_ENST00000581208_CASP3_chr4_185550655_ENST00000393585_length(amino acids)=401AA_BP=326
MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLR
RHESCHTGIKLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAF
ATKDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKSYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHIL

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>98047_98047_3_VEZF1-CASP3_VEZF1_chr17_56057964_ENST00000581208_CASP3_chr4_185550655_ENST00000517513_length(amino acids)=401AA_BP=326
MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLR
RHESCHTGIKLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAF
ATKDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKSYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHIL

--------------------------------------------------------------

>98047_98047_4_VEZF1-CASP3_VEZF1_chr17_56057964_ENST00000584396_CASP3_chr4_185550655_ENST00000308394_length(amino acids)=392AA_BP=317
MAAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGI
KLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHL
NRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTH
MVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKSYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVAT

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>98047_98047_5_VEZF1-CASP3_VEZF1_chr17_56057964_ENST00000584396_CASP3_chr4_185550655_ENST00000393585_length(amino acids)=392AA_BP=317
MAAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGI
KLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHL
NRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTH
MVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKSYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVAT

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>98047_98047_6_VEZF1-CASP3_VEZF1_chr17_56057964_ENST00000584396_CASP3_chr4_185550655_ENST00000517513_length(amino acids)=392AA_BP=317
MAAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGI
KLVSRPKKTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHL
NRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTH
MVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKSYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVAT

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