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Center for Computational Systems Medicine
check button Predicted full-length fusion amino acid sequences. For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among all the predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>99980_99980_1_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000247843_PARPBP_chr12_102589728_ENST00000378128_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

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>99980_99980_2_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000247843_PARPBP_chr12_102589728_ENST00000543784_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

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>99980_99980_3_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000247843_PARPBP_chr12_102589729_ENST00000378128_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

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>99980_99980_4_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000247843_PARPBP_chr12_102589729_ENST00000543784_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

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>99980_99980_5_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000548020_PARPBP_chr12_102589728_ENST00000378128_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

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>99980_99980_6_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000548020_PARPBP_chr12_102589728_ENST00000543784_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

--------------------------------------------------------------

>99980_99980_7_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000548020_PARPBP_chr12_102589729_ENST00000378128_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

--------------------------------------------------------------

>99980_99980_8_YEATS4-PARPBP_YEATS4_chr12_69756687_ENST00000548020_PARPBP_chr12_102589729_ENST00000543784_length(amino acids)=136AA_BP=1
MSFYFLSDWLIFLILFHFYFCPDEHFQNSFQLLIFQQMDLHPLISIWFHIYCPLMSVPIFFSFLSKIPSNITVNYWFNDSNTLYSPAGVR

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