UTHEALTH HOME    ABOUT SBMI    A-Z    WEBMAIL    INSIDE THE UNIVERSITY
FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use
Center for Computational Systems Medicine level1
leaf

Fusion Gene Summary

leaf

Fusion Gene Sample Information

leaf

Fusion ORF Analysis

leaf

Fusion Amino Acid Sequences

leaf

Fusion Protein Functional Features

leaf

Fusion Protein-Protein Interaction

leaf

Related drugs with this fusion protein

leaf

Related disease with this fusion protein

Fusion Protein:YTHDC2-CTNND1

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: YTHDC2-CTNND1
FusionPDB ID: 100091
FusionGDB2.0 ID: 100091
HgeneTgene
Gene symbol

YTHDC2

CTNND1

Gene ID

64848

100528016

Gene nameYTH domain containing 2TMX2-CTNND1 readthrough (NMD candidate)
SynonymsCAHL|hYTHDC2CAS|CTNND1|p120(cas)|p120(ctn)
Cytomap

5q22.2

11q12.1

Type of geneprotein-codingncRNA
Description3'-5' RNA helicase YTHDC2CsA-associated helicase-like proteinprobable ATP-dependent RNA helicase YTHDC2Cadherin-associated Src substrateCatenin delta-1TMX2-CTNND1 readthrough (non-protein coding)p120 catenin
Modification date2020031320200313
UniProtAcc.

O60716

Ensembl transtripts involved in fusion geneENST idsENST00000161863, ENST00000515883, 
ENST00000358694, ENST00000399050, 
ENST00000415361, ENST00000426142, 
ENST00000525902, ENST00000526357, 
ENST00000526772, ENST00000526938, 
ENST00000527467, ENST00000528232, 
ENST00000528621, ENST00000529526, 
ENST00000529873, ENST00000529986, 
ENST00000530748, ENST00000531014, 
ENST00000532245, ENST00000532463, 
ENST00000532649, ENST00000532787, 
ENST00000532844, ENST00000533667, 
ENST00000534579, ENST00000360682, 
ENST00000361332, ENST00000361391, 
ENST00000361796, ENST00000399039, 
ENST00000428599, ENST00000524630, 
ENST00000529919, ENST00000530094, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score4 X 4 X 3=4817 X 21 X 10=3570
# samples 425
** MAII scorelog2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(25/3570*10)=-3.83592407425437
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: YTHDC2 [Title/Abstract] AND CTNND1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)YTHDC2(112851059)-CTNND1(57569205), # samples:1
Anticipated loss of major functional domain due to fusion event.YTHDC2-CTNND1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
YTHDC2-CTNND1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
YTHDC2-CTNND1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
YTHDC2-CTNND1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneYTHDC2

GO:0034612

response to tumor necrosis factor

21559518

HgeneYTHDC2

GO:0070555

response to interleukin-1

21559518


check buttonFusion gene breakpoints across YTHDC2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CTNND1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


Top

Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4Non-CancerTCGA-BR-6564-11AYTHDC2chr5

112851059

+CTNND1chr11

57569205

+


Top

Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000161863YTHDC2chr5112851059+ENST00000524630CTNND1chr1157569205+55754911742336720
ENST00000161863YTHDC2chr5112851059+ENST00000529919CTNND1chr1157569205+39844911742351725
ENST00000161863YTHDC2chr5112851059+ENST00000399039CTNND1chr1157569205+43924911742351725
ENST00000161863YTHDC2chr5112851059+ENST00000360682CTNND1chr1157569205+52504911742378734
ENST00000161863YTHDC2chr5112851059+ENST00000361796CTNND1chr1157569205+52084911742336720
ENST00000161863YTHDC2chr5112851059+ENST00000361391CTNND1chr1157569205+52314911742360728
ENST00000161863YTHDC2chr5112851059+ENST00000530094CTNND1chr1157569205+52944911742423749
ENST00000161863YTHDC2chr5112851059+ENST00000428599CTNND1chr1157569205+52074911742336720
ENST00000161863YTHDC2chr5112851059+ENST00000361332CTNND1chr1157569205+52944911742423749
ENST00000515883YTHDC2chr5112851059+ENST00000524630CTNND1chr1157569205+55494651482310720
ENST00000515883YTHDC2chr5112851059+ENST00000529919CTNND1chr1157569205+39584651482325725
ENST00000515883YTHDC2chr5112851059+ENST00000399039CTNND1chr1157569205+43664651482325725
ENST00000515883YTHDC2chr5112851059+ENST00000360682CTNND1chr1157569205+52244651482352734
ENST00000515883YTHDC2chr5112851059+ENST00000361796CTNND1chr1157569205+51824651482310720
ENST00000515883YTHDC2chr5112851059+ENST00000361391CTNND1chr1157569205+52054651482334728
ENST00000515883YTHDC2chr5112851059+ENST00000530094CTNND1chr1157569205+52684651482397749
ENST00000515883YTHDC2chr5112851059+ENST00000428599CTNND1chr1157569205+51814651482310720
ENST00000515883YTHDC2chr5112851059+ENST00000361332CTNND1chr1157569205+52684651482397749

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000161863ENST00000524630YTHDC2chr5112851059+CTNND1chr1157569205+0.001718710.99828136
ENST00000161863ENST00000529919YTHDC2chr5112851059+CTNND1chr1157569205+0.0055372520.9944628
ENST00000161863ENST00000399039YTHDC2chr5112851059+CTNND1chr1157569205+0.003047720.9969523
ENST00000161863ENST00000360682YTHDC2chr5112851059+CTNND1chr1157569205+0.0019190160.99808097
ENST00000161863ENST00000361796YTHDC2chr5112851059+CTNND1chr1157569205+0.0018421010.9981579
ENST00000161863ENST00000361391YTHDC2chr5112851059+CTNND1chr1157569205+0.0017951440.9982048
ENST00000161863ENST00000530094YTHDC2chr5112851059+CTNND1chr1157569205+0.0019303470.9980697
ENST00000161863ENST00000428599YTHDC2chr5112851059+CTNND1chr1157569205+0.0018404060.9981596
ENST00000161863ENST00000361332YTHDC2chr5112851059+CTNND1chr1157569205+0.0019303470.9980697
ENST00000515883ENST00000524630YTHDC2chr5112851059+CTNND1chr1157569205+0.0017156830.9982843
ENST00000515883ENST00000529919YTHDC2chr5112851059+CTNND1chr1157569205+0.005509020.994491
ENST00000515883ENST00000399039YTHDC2chr5112851059+CTNND1chr1157569205+0.0030365630.99696344
ENST00000515883ENST00000360682YTHDC2chr5112851059+CTNND1chr1157569205+0.0019212320.9980788
ENST00000515883ENST00000361796YTHDC2chr5112851059+CTNND1chr1157569205+0.0018423830.99815756
ENST00000515883ENST00000361391YTHDC2chr5112851059+CTNND1chr1157569205+0.0017987110.99820125
ENST00000515883ENST00000530094YTHDC2chr5112851059+CTNND1chr1157569205+0.0019331620.99806684
ENST00000515883ENST00000428599YTHDC2chr5112851059+CTNND1chr1157569205+0.0018406820.99815935
ENST00000515883ENST00000361332YTHDC2chr5112851059+CTNND1chr1157569205+0.0019331620.99806684

Top

Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>100091_100091_1_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000360682_length(amino acids)=734AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPE
VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIP
NLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEG
WKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDEGQESLEEELDVLVLD

--------------------------------------------------------------

>100091_100091_2_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000361332_length(amino acids)=749AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDE

--------------------------------------------------------------

>100091_100091_3_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000361391_length(amino acids)=728AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDEGQESLEEELDVLVLDDEGGQV

--------------------------------------------------------------

>100091_100091_4_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000361796_length(amino acids)=720AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI

--------------------------------------------------------------

>100091_100091_5_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000399039_length(amino acids)=725AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPE
VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIP
NLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEG
WKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTT

--------------------------------------------------------------

>100091_100091_6_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000428599_length(amino acids)=720AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI

--------------------------------------------------------------

>100091_100091_7_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000524630_length(amino acids)=720AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI

--------------------------------------------------------------

>100091_100091_8_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000529919_length(amino acids)=725AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPE
VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIP
NLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEG
WKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTT

--------------------------------------------------------------

>100091_100091_9_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000161863_CTNND1_chr11_57569205_ENST00000530094_length(amino acids)=749AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDE

--------------------------------------------------------------

>100091_100091_10_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000360682_length(amino acids)=734AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPE
VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIP
NLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEG
WKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDEGQESLEEELDVLVLD

--------------------------------------------------------------

>100091_100091_11_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000361332_length(amino acids)=749AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDE

--------------------------------------------------------------

>100091_100091_12_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000361391_length(amino acids)=728AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDEGQESLEEELDVLVLDDEGGQV

--------------------------------------------------------------

>100091_100091_13_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000361796_length(amino acids)=720AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI

--------------------------------------------------------------

>100091_100091_14_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000399039_length(amino acids)=725AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPE
VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIP
NLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEG
WKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTT

--------------------------------------------------------------

>100091_100091_15_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000428599_length(amino acids)=720AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI

--------------------------------------------------------------

>100091_100091_16_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000524630_length(amino acids)=720AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI

--------------------------------------------------------------

>100091_100091_17_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000529919_length(amino acids)=725AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPE
VVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIP
NLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEG
WKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTT

--------------------------------------------------------------

>100091_100091_18_YTHDC2-CTNND1_YTHDC2_chr5_112851059_ENST00000515883_CTNND1_chr11_57569205_ENST00000530094_length(amino acids)=749AA_BP=106
MAAPVRRDHLFRAMSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQREMEFPSSLTSTERAF
IHRLSQSLGLVSKSKGSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHL
CYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHD
SIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS
KLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKGKGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYI
SLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNL
PGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDF
QVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQDE

--------------------------------------------------------------

Top

Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:112851059/chr11:57569205)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CTNND1

O60716

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Key regulator of cell-cell adhesion that associates with and regulates the cell adhesion properties of both C-, E- and N-cadherins, being critical for their surface stability (PubMed:14610055, PubMed:20371349). Beside cell-cell adhesion, regulates gene transcription through several transcription factors including ZBTB33/Kaiso2 and GLIS2, and the activity of Rho family GTPases and downstream cytoskeletal dynamics (PubMed:10207085, PubMed:20371349). Implicated both in cell transformation by SRC and in ligand-induced receptor signaling through the EGF, PDGF, CSF-1 and ERBB2 receptors (PubMed:17344476). {ECO:0000269|PubMed:10207085, ECO:0000269|PubMed:14610055, ECO:0000269|PubMed:17344476, ECO:0000269|PubMed:20371349}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+23015_3192.666666666666671898.6666666666667Compositional biasNote=Gly-rich
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052590201510_460617.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052677201410_460611.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052746701610_460646.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053101401510_460640.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053366701410_460619.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519358_395318.6666666666667934.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519398_437318.6666666666667934.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519441_475318.6666666666667934.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519476_516318.6666666666667934.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519534_573318.6666666666667934.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519583_624318.6666666666667934.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519653_693318.6666666666667934.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519700_739318.6666666666667934.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519740_780318.6666666666667934.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000358694519781_826318.6666666666667934.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520358_395318.6666666666667948.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520398_437318.6666666666667948.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520441_475318.6666666666667948.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520476_516318.6666666666667948.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520534_573318.6666666666667948.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520583_624318.6666666666667948.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520653_693318.6666666666667948.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520700_739318.6666666666667948.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520740_780318.6666666666667948.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000360682520781_826318.6666666666667948.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520358_395318.6666666666667963.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520398_437318.6666666666667963.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520441_475318.6666666666667963.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520476_516318.6666666666667963.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520534_573318.6666666666667963.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520583_624318.6666666666667963.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520653_693318.6666666666667963.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520700_739318.6666666666667963.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520740_780318.6666666666667963.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361332520781_826318.6666666666667963.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519358_395318.6666666666667942.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519398_437318.6666666666667942.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519441_475318.6666666666667942.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519476_516318.6666666666667942.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519534_573318.6666666666667942.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519583_624318.6666666666667942.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519653_693318.6666666666667942.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519700_739318.6666666666667942.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519740_780318.6666666666667942.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361391519781_826318.6666666666667942.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519358_395318.6666666666667934.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519398_437318.6666666666667934.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519441_475318.6666666666667934.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519476_516318.6666666666667934.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519534_573318.6666666666667934.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519583_624318.6666666666667934.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519653_693318.6666666666667934.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519700_739318.6666666666667934.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519740_780318.6666666666667934.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000361796519781_826318.6666666666667934.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521358_395318.6666666666667969.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521398_437318.6666666666667969.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521441_475318.6666666666667969.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521476_516318.6666666666667969.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521534_573318.6666666666667969.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521583_624318.6666666666667969.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521653_693318.6666666666667969.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521700_739318.6666666666667969.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521740_780318.6666666666667969.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000399050521781_826318.6666666666667969.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319358_395217.66666666666666868.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319398_437217.66666666666666868.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319441_475217.66666666666666868.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319476_516217.66666666666666868.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319534_573217.66666666666666868.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319583_624217.66666666666666868.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319653_693217.66666666666666868.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319700_739217.66666666666666868.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319740_780217.66666666666666868.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000415361319781_826217.66666666666666868.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317358_395217.66666666666666833.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317398_437217.66666666666666833.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317441_475217.66666666666666833.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317476_516217.66666666666666833.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317534_573217.66666666666666833.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317583_624217.66666666666666833.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317653_693217.66666666666666833.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317700_739217.66666666666666833.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317740_780217.66666666666666833.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000426142317781_826217.66666666666666833.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418358_395318.6666666666667934.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418398_437318.6666666666667934.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418441_475318.6666666666667934.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418476_516318.6666666666667934.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418534_573318.6666666666667934.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418583_624318.6666666666667934.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418653_693318.6666666666667934.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418700_739318.6666666666667934.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418740_780318.6666666666667934.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000428599418781_826318.6666666666667934.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519358_395318.6666666666667934.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519398_437318.6666666666667934.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519441_475318.6666666666667934.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519476_516318.6666666666667934.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519534_573318.6666666666667934.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519583_624318.6666666666667934.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519653_693318.6666666666667934.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519700_739318.6666666666667934.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519740_780318.6666666666667934.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000524630519781_826318.6666666666667934.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015358_3950617.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015398_4370617.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015441_4750617.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015476_5160617.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015534_5730617.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015583_6240617.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015653_6930617.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015700_7390617.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015740_7800617.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000525902015781_8260617.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419358_395264.6666666666667909.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419398_437264.6666666666667909.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419441_475264.6666666666667909.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419476_516264.6666666666667909.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419534_573264.6666666666667909.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419583_624264.6666666666667909.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419653_693264.6666666666667909.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419700_739264.6666666666667909.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419740_780264.6666666666667909.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526357419781_826264.6666666666667909.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014358_3950611.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014398_4370611.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014441_4750611.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014476_5160611.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014534_5730611.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014583_6240611.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014653_6930611.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014700_7390611.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014740_7800611.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526772014781_8260611.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418358_395318.6666666666667919.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418398_437318.6666666666667919.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418441_475318.6666666666667919.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418476_516318.6666666666667919.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418534_573318.6666666666667919.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418583_624318.6666666666667919.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418653_693318.6666666666667919.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418700_739318.6666666666667919.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418740_780318.6666666666667919.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000526938418781_826318.6666666666667919.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016358_3950646.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016398_4370646.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016441_4750646.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016476_5160646.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016534_5730646.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016583_6240646.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016653_6930646.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016700_7390646.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016740_7800646.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000527467016781_8260646.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318358_395217.66666666666666839.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318398_437217.66666666666666839.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318441_475217.66666666666666839.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318476_516217.66666666666666839.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318534_573217.66666666666666839.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318583_624217.66666666666666839.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318653_693217.66666666666666839.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318700_739217.66666666666666839.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318740_780217.66666666666666839.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528232318781_826217.66666666666666839.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418358_395264.6666666666667880.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418398_437264.6666666666667880.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418441_475264.6666666666667880.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418476_516264.6666666666667880.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418534_573264.6666666666667880.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418583_624264.6666666666667880.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418653_693264.6666666666667880.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418700_739264.6666666666667880.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418740_780264.6666666666667880.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000528621418781_826264.6666666666667880.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519358_395264.6666666666667880.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519398_437264.6666666666667880.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519441_475264.6666666666667880.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519476_516264.6666666666667880.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519534_573264.6666666666667880.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519583_624264.6666666666667880.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519653_693264.6666666666667880.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519700_739264.6666666666667880.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519740_780264.6666666666667880.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529526519781_826264.6666666666667880.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418358_395264.6666666666667888.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418398_437264.6666666666667888.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418441_475264.6666666666667888.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418476_516264.6666666666667888.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418534_573264.6666666666667888.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418583_624264.6666666666667888.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418653_693264.6666666666667888.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418700_739264.6666666666667888.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418740_780264.6666666666667888.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529873418781_826264.6666666666667888.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317358_395217.66666666666666833.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317398_437217.66666666666666833.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317441_475217.66666666666666833.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317476_516217.66666666666666833.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317534_573217.66666666666666833.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317583_624217.66666666666666833.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317653_693217.66666666666666833.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317700_739217.66666666666666833.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317740_780217.66666666666666833.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000529986317781_826217.66666666666666833.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318358_395217.66666666666666862.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318398_437217.66666666666666862.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318441_475217.66666666666666862.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318476_516217.66666666666666862.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318534_573217.66666666666666862.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318583_624217.66666666666666862.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318653_693217.66666666666666862.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318700_739217.66666666666666862.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318740_780217.66666666666666862.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530094318781_826217.66666666666666862.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419358_395264.6666666666667886.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419398_437264.6666666666667886.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419441_475264.6666666666667886.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419476_516264.6666666666667886.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419534_573264.6666666666667886.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419583_624264.6666666666667886.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419653_693264.6666666666667886.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419700_739264.6666666666667886.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419740_780264.6666666666667886.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000530748419781_826264.6666666666667886.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015358_3950640.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015398_4370640.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015441_4750640.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015476_5160640.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015534_5730640.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015583_6240640.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015653_6930640.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015700_7390640.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015740_7800640.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000531014015781_8260640.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216358_395217.66666666666666833.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216398_437217.66666666666666833.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216441_475217.66666666666666833.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216476_516217.66666666666666833.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216534_573217.66666666666666833.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216583_624217.66666666666666833.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216653_693217.66666666666666833.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216700_739217.66666666666666833.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216740_780217.66666666666666833.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532245216781_826217.66666666666666833.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317358_395217.66666666666666833.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317398_437217.66666666666666833.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317441_475217.66666666666666833.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317476_516217.66666666666666833.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317534_573217.66666666666666833.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317583_624217.66666666666666833.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317653_693217.66666666666666833.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317700_739217.66666666666666833.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317740_780217.66666666666666833.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532463317781_826217.66666666666666833.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519358_395264.6666666666667880.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519398_437264.6666666666667880.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519441_475264.6666666666667880.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519476_516264.6666666666667880.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519534_573264.6666666666667880.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519583_624264.6666666666667880.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519653_693264.6666666666667880.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519700_739264.6666666666667880.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519740_780264.6666666666667880.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532649519781_826264.6666666666667880.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317358_395217.66666666666666841.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317398_437217.66666666666666841.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317441_475217.66666666666666841.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317476_516217.66666666666666841.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317534_573217.66666666666666841.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317583_624217.66666666666666841.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317653_693217.66666666666666841.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317700_739217.66666666666666841.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317740_780217.66666666666666841.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532787317781_826217.66666666666666841.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420358_395264.6666666666667915.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420398_437264.6666666666667915.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420441_475264.6666666666667915.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420476_516264.6666666666667915.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420534_573264.6666666666667915.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420583_624264.6666666666667915.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420653_693264.6666666666667915.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420700_739264.6666666666667915.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420740_780264.6666666666667915.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000532844420781_826264.6666666666667915.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014358_3950619.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014398_4370619.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014441_4750619.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014476_5160619.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014534_5730619.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014583_6240619.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014653_6930619.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014700_7390619.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014740_7800619.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000533667014781_8260619.0RepeatNote=ARM 10
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519358_395264.6666666666667880.0RepeatNote=ARM 1
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519398_437264.6666666666667880.0RepeatNote=ARM 2
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519441_475264.6666666666667880.0RepeatNote=ARM 3
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519476_516264.6666666666667880.0RepeatNote=ARM 4
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519534_573264.6666666666667880.0RepeatNote=ARM 5
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519583_624264.6666666666667880.0RepeatNote=ARM 6
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519653_693264.6666666666667880.0RepeatNote=ARM 7
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519700_739264.6666666666667880.0RepeatNote=ARM 8
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519740_780264.6666666666667880.0RepeatNote=ARM 9
TgeneCTNND1chr5:112851059chr11:57569205ENST00000534579519781_826264.6666666666667880.0RepeatNote=ARM 10

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+2301248_128192.666666666666671898.6666666666667Compositional biasNote=Ser-rich
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+2301288_141892.666666666666671898.6666666666667DomainYTH
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+230203_36992.666666666666671898.6666666666667DomainHelicase ATP-binding
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+23038_10692.666666666666671898.6666666666667DomainR3H
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+230612_78492.666666666666671898.6666666666667DomainHelicase C-terminal
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+230316_31992.666666666666671898.6666666666667MotifNote=DEAH box
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+230216_22392.666666666666671898.6666666666667Nucleotide bindingATP
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+2301294_129692.666666666666671898.6666666666667RegionN6-methyladenosine binding
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+230506_53892.666666666666671898.6666666666667RepeatNote=ANK 1
HgeneYTHDC2chr5:112851059chr11:57569205ENST00000161863+230539_57192.666666666666671898.6666666666667RepeatNote=ANK 2
TgeneCTNND1chr5:112851059chr11:57569205ENST0000035869451910_46318.6666666666667934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000036068252010_46318.6666666666667948.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000036133252010_46318.6666666666667963.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000036139151910_46318.6666666666667942.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000036179651910_46318.6666666666667934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000039905052110_46318.6666666666667969.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000041536131910_46217.66666666666666868.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000042614231710_46217.66666666666666833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000042859941810_46318.6666666666667934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052463051910_46318.6666666666667934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052635741910_46264.6666666666667909.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052693841810_46318.6666666666667919.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052823231810_46217.66666666666666839.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052862141810_46264.6666666666667880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052952651910_46264.6666666666667880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052987341810_46264.6666666666667888.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000052998631710_46217.66666666666666833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053009431810_46217.66666666666666862.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053074841910_46264.6666666666667886.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053224521610_46217.66666666666666833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053246331710_46217.66666666666666833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053264951910_46264.6666666666667880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053278731710_46217.66666666666666841.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053284442010_46264.6666666666667915.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr5:112851059chr11:57569205ENST0000053457951910_46264.6666666666667880.0Coiled coilOntology_term=ECO:0000255


Top

Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
YTHDC2
CTNND1


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs to YTHDC2-CTNND1


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

Top

Related Diseases to YTHDC2-CTNND1


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource