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Center for Computational Systems Medicine level3
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein Structure

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pLDDT scores

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Ramachandran Plot of Fusion Protein Structure

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Potential Active Site Information

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Potentially Interacting Small Molecules through Virtual Screening

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Biochemical Features of Small Molecules with ADME

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Drug Toxicity Information

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:ZC3H7B-BCOR

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: ZC3H7B-BCOR
FusionPDB ID: 100589
FusionGDB2.0 ID: 100589
HgeneTgene
Gene symbol

ZC3H7B

BCOR

Gene ID

23264

54880

Gene namezinc finger CCCH-type containing 7BBCL6 corepressor
SynonymsROXAN1|RoXaNANOP2|MAA2|MCOPS2
Cytomap

22q13.2

Xp11.4

Type of geneprotein-codingprotein-coding
Descriptionzinc finger CCCH domain-containing protein 7BRotavirus 'X' associated non-structural proteinrotavirus 'X'-associated non-structural proteinrotavirus X protein associated with NSP3ubiquitous tetratricopeptide containing protein RoXaNBCL-6 corepressorBCL-6 coreceptorBCL-6 interacting corepressorBCL6 interacting corepressor
Modification date2020031320200328
UniProtAcc

Q9UGR2

Q5H9F3

Ensembl transtripts involved in fusion geneENST idsENST00000351589, ENST00000352645, 
ENST00000342274, ENST00000378444, 
ENST00000378455, ENST00000378463, 
ENST00000397354, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score15 X 12 X 9=16206 X 12 X 4=288
# samples 188
** MAII scorelog2(18/1620*10)=-3.16992500144231
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(8/288*10)=-1.84799690655495
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: ZC3H7B [Title/Abstract] AND BCOR [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneBCOR

GO:0035518

histone H2A monoubiquitination

16943429

TgeneBCOR

GO:0045892

negative regulation of transcription, DNA-templated

10898795


check buttonFusion gene breakpoints across ZC3H7B (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across BCOR (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerKB3..ZC3H7Bchr22

41736141

+BCORchrX

39923103

-
ChimerKB3..ZC3H7Bchr22

41736141

+BCORchrX

39923205

-
ChimerKB4..ZC3H7Bchr22

41735819

+BCORchrX

41735819

-


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000352645ZC3H7Bchr2241736141+ENST00000378455BCORchrX39923103-392213952543058934
ENST00000352645ZC3H7Bchr2241736141+ENST00000342274BCORchrX39923103-392013952543058934
ENST00000352645ZC3H7Bchr2241736141+ENST00000378463BCORchrX39923103-323213952543130958
ENST00000352645ZC3H7Bchr2241736141+ENST00000397354BCORchrX39923103-392213952543058934
ENST00000352645ZC3H7Bchr2241736141+ENST00000378444BCORchrX39923103-392013952541438394
ENST00000351589ZC3H7Bchr2241736141+ENST00000378455BCORchrX39923103-3665113802801933
ENST00000351589ZC3H7Bchr2241736141+ENST00000342274BCORchrX39923103-3663113802801933
ENST00000351589ZC3H7Bchr2241736141+ENST00000378463BCORchrX39923103-2975113802873957
ENST00000351589ZC3H7Bchr2241736141+ENST00000397354BCORchrX39923103-3665113802801933
ENST00000351589ZC3H7Bchr2241736141+ENST00000378444BCORchrX39923103-3663113801181393

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>100589_100589_1_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000351589_BCOR_chrX_39923103_ENST00000342274_length(amino acids)=933AA_BP=379
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAA
CYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELETF
SLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLLD
SLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRLD
ALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSE
ESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRL
CKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPE
ARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDH
LEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDDA
YSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKE

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>100589_100589_2_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000351589_BCOR_chrX_39923103_ENST00000378444_length(amino acids)=393AA_BP=
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAA
CYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELETF
SLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLLD
SLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRLD

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>100589_100589_3_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000351589_BCOR_chrX_39923103_ENST00000378455_length(amino acids)=933AA_BP=379
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAA
CYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELETF
SLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLLD
SLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRLD
ALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSE
ESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRL
CKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPE
ARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDH
LEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDDA
YSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKE

--------------------------------------------------------------

>100589_100589_4_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000351589_BCOR_chrX_39923103_ENST00000378463_length(amino acids)=957AA_BP=379
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAA
CYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELETF
SLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLLD
SLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRLD
ALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSE
ESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRL
CKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPE
ARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDH
LEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDDA
YSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKE

--------------------------------------------------------------

>100589_100589_5_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000351589_BCOR_chrX_39923103_ENST00000397354_length(amino acids)=933AA_BP=379
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAA
CYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELETF
SLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLLD
SLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRLD
ALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSE
ESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRL
CKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPPE
ARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDH
LEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDDA
YSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKE

--------------------------------------------------------------

>100589_100589_6_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000352645_BCOR_chrX_39923103_ENST00000342274_length(amino acids)=934AA_BP=380
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRA
ACYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELET
FSLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLL
DSLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRL
DALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWS
EESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKR
LCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPP
EARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVEND
HLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDD
AYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESK

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>100589_100589_7_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000352645_BCOR_chrX_39923103_ENST00000378444_length(amino acids)=394AA_BP=
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRA
ACYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELET
FSLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLL
DSLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRL

--------------------------------------------------------------

>100589_100589_8_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000352645_BCOR_chrX_39923103_ENST00000378455_length(amino acids)=934AA_BP=380
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRA
ACYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELET
FSLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLL
DSLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRL
DALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWS
EESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKR
LCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPP
EARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVEND
HLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDD
AYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESK

--------------------------------------------------------------

>100589_100589_9_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000352645_BCOR_chrX_39923103_ENST00000378463_length(amino acids)=958AA_BP=380
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRA
ACYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELET
FSLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLL
DSLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRL
DALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWS
EESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKR
LCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPP
EARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVEND
HLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDD
AYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESK

--------------------------------------------------------------

>100589_100589_10_ZC3H7B-BCOR_ZC3H7B_chr22_41736141_ENST00000352645_BCOR_chrX_39923103_ENST00000397354_length(amino acids)=934AA_BP=380
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREKDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRA
ACYFTMGLYEKALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDESVTQLGQELAQKLGLRVRKAYKRPQELET
FSLLSNGTAAGVADQGTSNGLGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDVFGPELDTLL
DSLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLDLLPYSETRL
DALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQVSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWS
EESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKR
LCKTKHLIPQESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQLPCSSSPQETTQSRPMPP
EARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVEND
HLEIVRLLLSYGADPTLATYSGRTIMKMTHSELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPGPEDQDDDDD
AYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESK

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr22:/chrX:)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ZC3H7B

Q9UGR2

BCOR

Q5H9F3

FUNCTION: May be a specific regulator of miRNA biogenesis. Binds to microRNAs MIR7-1, MIR16-2 and MIR29A hairpins recognizing the 'ATA(A/T)' motif in the apical loop. {ECO:0000269|PubMed:28431233}.FUNCTION: Transcriptional corepressor. May specifically inhibit gene expression when recruited to promoter regions by sequence-specific DNA-binding proteins such as BCL6. This repression may be mediated at least in part by histone deacetylase activities which can associate with this corepressor. {ECO:0000269|PubMed:17379597}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Protein Structures

check button PDB and CIF files of the predicted fusion proteins
* Here we show the 3D structure of the fusion proteins using Mol*. AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Model confidence is shown from the pLDDT values per residue. pLDDT corresponds to the model’s prediction of its score on the local Distance Difference Test. It is a measure of local accuracy (from AlphfaFold website). To color code individual residues, we transformed individual PDB files into CIF format.
Fusion protein PDB link (fusion AA seq ID in FusionPDB)HgeneHchrHbpHstrandTgeneTchrTbpTstrandAA seqLen(AA seq)
PDB file (150) >>>150.pdbFusion protein BP residue:
CIF file (150) >>>150.cif
ZC3H7Bchr2241736141+BCORchrX39923103-
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREK
DYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYEK
ALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDE
SVTQLGQELAQKLGLRVRKAYKRPQELETFSLLSNGTAAGVADQGTSNGL
GSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTD
SLDDFSDGDVFGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGTP
LLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLD
393
3D view using mol* of 150 (AA BP:)
PDB file (152) >>>152.pdbFusion protein BP residue:
CIF file (152) >>>152.cif
ZC3H7Bchr2241736141+BCORchrX39923103-
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFRE
KDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYE
KALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHD
ESVTQLGQELAQKLGLRVRKAYKRPQELETFSLLSNGTAAGVADQGTSNG
LGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPST
DSLDDFSDGDVFGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGT
PLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPL
394
3D view using mol* of 152 (AA BP:)
PDB file (715) >>>715.pdbFusion protein BP residue: 379
CIF file (715) >>>715.cif
ZC3H7Bchr2241736141+BCORchrX39923103-
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREK
DYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYEK
ALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDE
SVTQLGQELAQKLGLRVRKAYKRPQELETFSLLSNGTAAGVADQGTSNGL
GSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTD
SLDDFSDGDVFGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGTP
LLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLD
LLPYSETRLDALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQV
SAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSE
ESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQ
KIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQE
SRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRL
QQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAAR
LGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGAD
VNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTHS
ELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPG
PEDQDDDDDAYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKK
LKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKE
933
3D view using mol* of 715 (AA BP:379)
PDB file (716) >>>716.pdbFusion protein BP residue: 380
CIF file (716) >>>716.cif
ZC3H7Bchr2241736141+BCORchrX39923103-
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFRE
KDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYE
KALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHD
ESVTQLGQELAQKLGLRVRKAYKRPQELETFSLLSNGTAAGVADQGTSNG
LGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPST
DSLDDFSDGDVFGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGT
PLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPL
DLLPYSETRLDALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQ
VSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWS
EESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQ
QKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQ
ESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDR
LQQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAA
RLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGA
DVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTH
SELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPP
GPEDQDDDDDAYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLK
KLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESK
934
3D view using mol* of 716 (AA BP:380)
PDB file (731) >>>731.pdbFusion protein BP residue: 379
CIF file (731) >>>731.cif
ZC3H7Bchr2241736141+BCORchrX39923103-
MERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFREK
DYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYEK
ALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHDE
SVTQLGQELAQKLGLRVRKAYKRPQELETFSLLSNGTAAGVADQGTSNGL
GSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTD
SLDDFSDGDVFGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGTP
LLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPLD
LLPYSETRLDALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQV
SAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWSE
ESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQQ
KIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQE
SRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDRL
QQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAAR
LGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGAD
VNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTHS
ELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPPG
PEDQDDDDDAYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLKK
LKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESKE
LLDLVEFTNEIQTLLGSSVEWLHPSDLASDNYWKSPQIARGSVEGKKTDD
957
3D view using mol* of 731 (AA BP:379)
PDB file (733) >>>733.pdbFusion protein BP residue: 380
CIF file (733) >>>733.cif
ZC3H7Bchr2241736141+BCORchrX39923103-
MMERQKRKADIEKGLQFIQSTLPLKQEEYEAFLLKLVQNLFAEGNDLFRE
KDYKQALVQYMEGLNVADYAASDQVALPRELLCKLHVNRAACYFTMGLYE
KALEDSEKALGLDSESIRALFRKARALNELGRHKEAYECSSRCSLALPHD
ESVTQLGQELAQKLGLRVRKAYKRPQELETFSLLSNGTAAGVADQGTSNG
LGSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPST
DSLDDFSDGDVFGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGT
PLLPPVVGGSIPVSSPLPPASFGLVMDPSKKLAASVLDALDPPGPTLDPL
DLLPYSETRLDALDSFGSTRGSLDKPDSFMGLHPKKQRHLLHLRERWEQQ
VSAADGKPGRQSRKEVTQATQPEAIPQGTNITEEKPGRKRAEAKGNRSWS
EESLKPSDNEQGLPVFSGSPPMKSLSSTSAGGKKQAQPSCAPASRPPAKQ
QKIKENQKTDVLCADEEEDCQAASLLQKYTDNSEKPSGKRLCKTKHLIPQ
ESRRGLPLTGEYYVENADGKVTVRRFRKRPEPSSDYDLSPAKQEPKPFDR
LQQLLPASQSTQLPCSSSPQETTQSRPMPPEARRLIVNKNAGETLLQRAA
RLGYEEVVLYCLENKICDVNHRDNAGYCALHEACARGWLNIVRHLLEYGA
DVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTH
SELMEKFLTDYLNDLQGRNDDDASGTWDFYGSSVCEPDDESGYDVLANPP
GPEDQDDDDDAYSDVFEFEFSETPLLPCYNIQVSVAQGPRNWLLLSDVLK
KLKMSSRIFRCNFPNVEIVTIAEAEFYRQVSASLLFSCSKDLEAFNPESK
ELLDLVEFTNEIQTLLGSSVEWLHPSDLASDNYWKSPQIARGSVEGKKTD
958
3D view using mol* of 733 (AA BP:380)


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pLDDT score distribution

check button pLDDT score distribution of the predicted wild-type structures of two partner proteins from AlphaFold2
* AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100.
ZC3H7B_pLDDT.png
all structure
all structure
BCOR_pLDDT.png
all structure
all structure

check button pLDDT score distribution of the predicted fusion protein structures from AlphaFold2
* AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100.
ZC3H7B_BCOR_150_PAE.png (AA BP:)
all structure
ZC3H7B_BCOR_150_pLDDT.png (AA BP:)
all structure
ZC3H7B_BCOR_150_pLDDT_and_active_sites.png (AA BP:)
all structure
ZC3H7B_BCOR_150_violinplot.png (AA BP:)
all structure
ZC3H7B_BCOR_152_PAE.png (AA BP:)
all structure
ZC3H7B_BCOR_152_pLDDT.png (AA BP:)
all structure
ZC3H7B_BCOR_152_pLDDT_and_active_sites.png (AA BP:)
all structure
ZC3H7B_BCOR_152_violinplot.png (AA BP:)
all structure
ZC3H7B_BCOR_715_pLDDT.png (AA BP:379)
all structure
ZC3H7B_BCOR_715_pLDDT_and_active_sites.png (AA BP:379)
all structure
ZC3H7B_BCOR_715_violinplot.png (AA BP:379)
all structure
ZC3H7B_BCOR_716_pLDDT.png (AA BP:380)
all structure
ZC3H7B_BCOR_716_pLDDT_and_active_sites.png (AA BP:380)
all structure
ZC3H7B_BCOR_716_violinplot.png (AA BP:380)
all structure
ZC3H7B_BCOR_731_pLDDT.png (AA BP:379)
all structure
ZC3H7B_BCOR_731_pLDDT_and_active_sites.png (AA BP:379)
all structure
ZC3H7B_BCOR_731_violinplot.png (AA BP:379)
all structure
ZC3H7B_BCOR_733_pLDDT.png (AA BP:380)
all structure
ZC3H7B_BCOR_733_pLDDT_and_active_sites.png (AA BP:380)
all structure
ZC3H7B_BCOR_733_violinplot.png (AA BP:380)
all structure


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Ramachandran Plot of Fusion Protein Structure


check button Ramachandran plot of the torsional angles - phi (φ)and psi (ψ) - of the residues (amino acids) contained in this fusion protein peptide.
Fusion AA seq ID in FusionPDB and their Ramachandran plots
ZC3H7B_BCOR_150.png
all structure
ZC3H7B_BCOR_152.png
all structure
ZC3H7B_BCOR_716.png
all structure
ZC3H7B_BCOR_731.png
all structure
ZC3H7B_BCOR_733.png
all structure

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Potential Active Site Information


check button The potential binding sites of these fusion proteins were identified using SiteMap, a module of the Schrodinger suite.
Fusion AA seq ID in FusionPDBSite scoreSizeD scoreVolumeExposureEnclosureContactPhobicPhilicBalanceDon/AccResidues
1501.0071261.079403.3680.6830.6080.7610.7620.6911.1031.118Chain A: 7,10,11,14,15,17,18,39,42,46,54,57,58,61,
64,65,68,321,322,323,325,326,327,328,330,331
1521.023931.083454.4750.6980.6730.8051.1810.6971.6940.59Chain A: 8,9,11,12,15,16,18,19,43,47,55,58,59,62,6
5,66,69,324,325,326,327,328,329,330,331,332,333
7150.982821.015748.4260.6180.6410.850.5760.950.6060.546Chain A: 2,5,6,9,29,30,33,34,37,38,40,41,44,45,47,
48,50,52,74,75,76,77,78,79,80,82,83,89,90,93,94,10
1,112,115,116,117,120,121,124,125,146,198,199,200,
201,203,204,205,206,207,208,209,210,211,212,213,21
4
7161.033221.067968.9750.5860.7050.9330.8010.9090.8821.06Chain A: 376,378,379,380,381,382,386,389,390,391,3
93,394,396,397,398,400,689,693,696,697,699,700,701
,702,703,723,726,727,729,730,731,732,733,734,735,7
53,756,757,760,761,763,764,765,767,768,772,773,775
,777,778,779,780,781,783,784,785
7311.01741661.0753737.450.67830.64850.80340.83480.77851.07230.6977Chain A: 114,116,119,133,136,137,139,140,141,142,1
43,144,145,153,156,157,160,165,166,167,168,290,291
,292,293,294,295,296,297,298,299,300,704,708,710,7
35,736,737,738,739,741,743
7331.02321601.0752376.9570.53220.66710.86840.61850.81310.76061.0831Chain A: 137,140,141,144,145,148,149,154,157,158,1
61,166,168,171,172,173,286,287,288,289,290,291,292
,293,294

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Potentially Interacting Small Molecules through Virtual Screening


check button The FDA-approved small molecule library molecules were subjected to virtual screening using the Glide.
Fusion AA seq ID in FusionPDBZINC IDDrugBank IDDrug nameDocking scoreGlide gscore

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check button Drug information from DrugBank of the top 20 interacting small molecules.
ZINC IDDrugBank IDDrug nameDrug typeSMILESDrug group

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Biochemical Features of Small Molecules


check button ADME (Absorption, Distribution, Metabolism, and Excretion) of drugs using QikProp(v3.9)
ZINC IDmol_MWdipoleSASAFOSAFISAPISAWPSAvolumedonorHBaccptHBIPHuman Oral AbsorptionPercent Human Oral AbsorptionRule Of FiveRule Of Three


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Drug Toxicity Information


check button Toxicity information of individual drugs using eToxPred
ZINC IDSmileSurface AccessibilityToxicity


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors
ZC3H7BATXN1, ATXN1L, ZYX, UBXN6, RC3H1, HSP90AA1, HECW2, MOV10, NXF1, TRIM25, G3BP1, KIAA1429, ZC3H7A, TRIM28, OBSL1, PLEKHA4, MIR7-1, MIR16-2, MIR29A, MIR205, ZNF638, DDX21, ESR1, FXR1, FXR2, RNF214, FMR1, ZFP36, N, SERBP1, HNRNPCL2, METTL21B,


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
ZC3H7Ball structure
BCORall structure


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to ZC3H7B-BCOR


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to ZC3H7B-BCOR


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID
ZC3H7BBCORLung AdenocarcinomaMyCancerGenome
ZC3H7BBCORAcute Myeloid LeukemiaMyCancerGenome
ZC3H7BBCORBreast Invasive Lobular CarcinomaMyCancerGenome
ZC3H7BBCORCancer Of Unknown PrimaryMyCancerGenome
ZC3H7BBCORColon AdenocarcinomaMyCancerGenome

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneBCORC1846265Microphthalmia, syndromic 24CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
TgeneBCORC0023487Acute Promyelocytic Leukemia2ORPHANET
TgeneBCORC0010606Adenoid Cystic Carcinoma1CTD_human
TgeneBCORC0022665Kidney Neoplasm1CTD_human
TgeneBCORC0027708Nephroblastoma1CTD_human
TgeneBCORC0029463Osteosarcoma1CTD_human
TgeneBCORC0206651Clear Cell Sarcoma of Soft Tissue1CTD_human
TgeneBCORC0206656Embryonal Rhabdomyosarcoma1CTD_human
TgeneBCORC0334488Clear cell sarcoma of kidney1ORPHANET
TgeneBCORC0740457Malignant neoplasm of kidney1CTD_human
TgeneBCORC0796016Microphthalmia, syndromic 11CTD_human;ORPHANET
TgeneBCORC2930471Bilateral Wilms Tumor1CTD_human