| UTHEALTH HOME ABOUT SBMI A-Z WEBMAIL INSIDE THE UNIVERSITY |
|
|||||||
|
Fusion Protein:CAMK2B-ICT1 |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: CAMK2B-ICT1 | FusionPDB ID: 12660 | FusionGDB2.0 ID: 12660 | Hgene | Tgene | Gene symbol | CAMK2B | ICT1 | Gene ID | 816 | 3396 |
| Gene name | calcium/calmodulin dependent protein kinase II beta | mitochondrial ribosomal protein L58 | |
| Synonyms | CAM2|CAMK2|CAMKB|CaMKIIbeta|MRD54 | DS-1|DS1|ICT1|MRP-L58 | |
| Cytomap | 7p13 | 17q25.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | calcium/calmodulin-dependent protein kinase type II subunit betaCaM kinase II beta subunitCaM-kinase II beta chaincaMK-II subunit betaproline rich calmodulin-dependent protein kinase | peptidyl-tRNA hydrolase ICT1, mitochondrial39S ribosomal protein L58, mitochondrialdigestion substraction 1immature colon carcinoma transcript 1 proteinmitochondrial large ribosomal subunit protein ICT1mitochondrial large ribosomal subunit protein mL | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | Q13554 | . | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000502837, ENST00000258682, ENST00000346990, ENST00000347193, ENST00000350811, ENST00000353625, ENST00000358707, ENST00000395747, ENST00000395749, ENST00000440254, ENST00000457475, ENST00000489429, | ENST00000301585, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 4 X 4 X 4=64 | 5 X 4 X 3=60 |
| # samples | 4 | 7 | |
| ** MAII score | log2(4/64*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/60*10)=0.222392421336448 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: CAMK2B [Title/Abstract] AND ICT1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | CAMK2B(44302603)-ICT1(73015794), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | CAMK2B-ICT1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CAMK2B-ICT1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | CAMK2B | GO:0046777 | protein autophosphorylation | 18817731 |
| Tgene | ICT1 | GO:0070126 | mitochondrial translational termination | 20186120 |
| Fusion gene breakpoints across CAMK2B (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
 |
| Fusion gene breakpoints across ICT1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
 |
Top |
Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | ESCA | TCGA-LN-A4MR | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + |
Top |
Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000350811 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 949 | 295 | 75 | 692 | 205 |
| ENST00000457475 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 1084 | 430 | 210 | 827 | 205 |
| ENST00000395749 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 951 | 297 | 77 | 694 | 205 |
| ENST00000440254 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 1109 | 455 | 235 | 852 | 205 |
| ENST00000358707 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 1078 | 424 | 204 | 821 | 205 |
| ENST00000353625 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 884 | 230 | 10 | 627 | 205 |
| ENST00000258682 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 877 | 223 | 3 | 620 | 205 |
| ENST00000347193 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 877 | 223 | 3 | 620 | 205 |
| ENST00000346990 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 877 | 223 | 3 | 620 | 205 |
| ENST00000395747 | CAMK2B | chr7 | 44302603 | - | ENST00000301585 | ICT1 | chr17 | 73015794 | + | 874 | 220 | 0 | 617 | 205 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000350811 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.00312194 | 0.996878 |
| ENST00000457475 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.005563513 | 0.9944365 |
| ENST00000395749 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.003229687 | 0.9967704 |
| ENST00000440254 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.006094485 | 0.9939055 |
| ENST00000358707 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.005093326 | 0.9949066 |
| ENST00000353625 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.002447491 | 0.9975526 |
| ENST00000258682 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.003087344 | 0.9969126 |
| ENST00000347193 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.003087344 | 0.9969126 |
| ENST00000346990 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.003087344 | 0.9969126 |
| ENST00000395747 | ENST00000301585 | CAMK2B | chr7 | 44302603 | - | ICT1 | chr17 | 73015794 | + | 0.00348475 | 0.9965153 |
Top |
Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >12660_12660_1_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000258682_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_2_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000346990_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_3_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000347193_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_4_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000350811_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_5_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000353625_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_6_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000358707_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_7_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000395747_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_8_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000395749_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_9_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000440254_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- >12660_12660_10_CAMK2B-ICT1_CAMK2B_chr7_44302603_ENST00000457475_ICT1_chr17_73015794_ENST00000301585_length(amino acids)=205AA_BP=73 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIDRLTISYCRSSGPGGQN VNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRIE -------------------------------------------------------------- |
Top |
Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr7:44302603/chr17:73015794) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CAMK2B | . |
| FUNCTION: Calcium/calmodulin-dependent protein kinase that functions autonomously after Ca(2+)/calmodulin-binding and autophosphorylation, and is involved in dendritic spine and synapse formation, neuronal plasticity and regulation of sarcoplasmic reticulum Ca(2+) transport in skeletal muscle. In neurons, plays an essential structural role in the reorganization of the actin cytoskeleton during plasticity by binding and bundling actin filaments in a kinase-independent manner. This structural function is required for correct targeting of CaMK2A, which acts downstream of NMDAR to promote dendritic spine and synapse formation and maintain synaptic plasticity which enables long-term potentiation (LTP) and hippocampus-dependent learning. In developing hippocampal neurons, promotes arborization of the dendritic tree and in mature neurons, promotes dendritic remodeling. Also regulates the migration of developing neurons (PubMed:29100089). Participates in the modulation of skeletal muscle function in response to exercise. In slow-twitch muscles, is involved in regulation of sarcoplasmic reticulum (SR) Ca(2+) transport and in fast-twitch muscle participates in the control of Ca(2+) release from the SR through phosphorylation of triadin, a ryanodine receptor-coupling factor, and phospholamban (PLN/PLB), an endogenous inhibitor of SERCA2A/ATP2A2. {ECO:0000269|PubMed:16690701, ECO:0000269|PubMed:29100089}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000258682 | - | 3 | 20 | 20_28 | 73.33333333333333 | 573.0 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000346990 | - | 3 | 16 | 20_28 | 73.33333333333333 | 505.0 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000347193 | - | 3 | 20 | 20_28 | 73.33333333333333 | 548.0 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000350811 | - | 3 | 21 | 20_28 | 73.33333333333333 | 738.3333333333334 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000353625 | - | 3 | 18 | 20_28 | 73.33333333333333 | 559.0 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000358707 | - | 3 | 19 | 20_28 | 73.33333333333333 | 520.0 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395747 | - | 3 | 19 | 20_28 | 73.33333333333333 | 519.0 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395749 | - | 3 | 24 | 20_28 | 73.33333333333333 | 1455.3333333333333 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000440254 | - | 3 | 21 | 20_28 | 73.33333333333333 | 566.6666666666666 | Nucleotide binding | ATP |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000457475 | - | 3 | 20 | 20_28 | 73.33333333333333 | 1265.0 | Nucleotide binding | ATP |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000258682 | - | 3 | 20 | 14_272 | 73.33333333333333 | 573.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000346990 | - | 3 | 16 | 14_272 | 73.33333333333333 | 505.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000347193 | - | 3 | 20 | 14_272 | 73.33333333333333 | 548.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000350811 | - | 3 | 21 | 14_272 | 73.33333333333333 | 738.3333333333334 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000353625 | - | 3 | 18 | 14_272 | 73.33333333333333 | 559.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000358707 | - | 3 | 19 | 14_272 | 73.33333333333333 | 520.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395747 | - | 3 | 19 | 14_272 | 73.33333333333333 | 519.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395749 | - | 3 | 24 | 14_272 | 73.33333333333333 | 1455.3333333333333 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000440254 | - | 3 | 21 | 14_272 | 73.33333333333333 | 566.6666666666666 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000457475 | - | 3 | 20 | 14_272 | 73.33333333333333 | 1265.0 | Domain | Protein kinase |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000258682 | - | 3 | 20 | 283_292 | 73.33333333333333 | 573.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000258682 | - | 3 | 20 | 291_301 | 73.33333333333333 | 573.0 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000346990 | - | 3 | 16 | 283_292 | 73.33333333333333 | 505.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000346990 | - | 3 | 16 | 291_301 | 73.33333333333333 | 505.0 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000347193 | - | 3 | 20 | 283_292 | 73.33333333333333 | 548.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000347193 | - | 3 | 20 | 291_301 | 73.33333333333333 | 548.0 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000350811 | - | 3 | 21 | 283_292 | 73.33333333333333 | 738.3333333333334 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000350811 | - | 3 | 21 | 291_301 | 73.33333333333333 | 738.3333333333334 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000353625 | - | 3 | 18 | 283_292 | 73.33333333333333 | 559.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000353625 | - | 3 | 18 | 291_301 | 73.33333333333333 | 559.0 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000358707 | - | 3 | 19 | 283_292 | 73.33333333333333 | 520.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000358707 | - | 3 | 19 | 291_301 | 73.33333333333333 | 520.0 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395747 | - | 3 | 19 | 283_292 | 73.33333333333333 | 519.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395747 | - | 3 | 19 | 291_301 | 73.33333333333333 | 519.0 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395749 | - | 3 | 24 | 283_292 | 73.33333333333333 | 1455.3333333333333 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000395749 | - | 3 | 24 | 291_301 | 73.33333333333333 | 1455.3333333333333 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000440254 | - | 3 | 21 | 283_292 | 73.33333333333333 | 566.6666666666666 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000440254 | - | 3 | 21 | 291_301 | 73.33333333333333 | 566.6666666666666 | Region | Note=Calmodulin-binding |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000457475 | - | 3 | 20 | 283_292 | 73.33333333333333 | 1265.0 | Region | Autoinhibitory domain |
| Hgene | CAMK2B | chr7:44302603 | chr17:73015794 | ENST00000457475 | - | 3 | 20 | 291_301 | 73.33333333333333 | 1265.0 | Region | Note=Calmodulin-binding |
Top |
Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| CAMK2B | |
| ICT1 |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs to CAMK2B-ICT1 |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
Top |
Related Diseases to CAMK2B-ICT1 |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2021-Present -The University of Texas Health Science Center at Houston (UTHealth)
Web File Viewing | Emergency Information |Campus Carry|Site Policies