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Fusion Protein:CHD1-MTOR |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: CHD1-MTOR | FusionPDB ID: 16279 | FusionGDB2.0 ID: 16279 | Hgene | Tgene | Gene symbol | CHD1 | MTOR | Gene ID | 1105 | 2475 |
| Gene name | chromodomain helicase DNA binding protein 1 | mechanistic target of rapamycin kinase | |
| Synonyms | CHD-1|PILBOS | FRAP|FRAP1|FRAP2|RAFT1|RAPT1|SKS | |
| Cytomap | 5q15-q21.1 | 1p36.22 | |
| Type of gene | protein-coding | protein-coding | |
| Description | chromodomain-helicase-DNA-binding protein 1ATP-dependent helicase CHD1 | serine/threonine-protein kinase mTORFK506 binding protein 12-rapamycin associated protein 2FK506-binding protein 12-rapamycin complex-associated protein 1FKBP-rapamycin associated proteinFKBP12-rapamycin complex-associated protein 1mammalian target o | |
| Modification date | 20200313 | 20200329 | |
| UniProtAcc | Q86WJ1 | TLDC1 | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000284049, ENST00000511067, | ENST00000376838, ENST00000495435, ENST00000361445, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 14 X 15 X 8=1680 | 12 X 11 X 8=1056 |
| # samples | 19 | 19 | |
| ** MAII score | log2(19/1680*10)=-3.14438990933518 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(19/1056*10)=-2.47453851102751 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: CHD1 [Title/Abstract] AND MTOR [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | CHD1(98199112)-MTOR(11273623), # samples:4 | ||
| Anticipated loss of major functional domain due to fusion event. | CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. CHD1-MTOR seems lost the major protein functional domain in Tgene partner, which is a kinase due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | MTOR | GO:0001558 | regulation of cell growth | 18762023 |
| Tgene | MTOR | GO:0001934 | positive regulation of protein phosphorylation | 20233713 |
| Tgene | MTOR | GO:0006468 | protein phosphorylation | 12150926|15467718|18925875 |
| Tgene | MTOR | GO:0009267 | cellular response to starvation | 28223137 |
| Tgene | MTOR | GO:0010507 | negative regulation of autophagy | 30704899 |
| Tgene | MTOR | GO:0016242 | negative regulation of macroautophagy | 25327288 |
| Tgene | MTOR | GO:0016310 | phosphorylation | 11853878|25327288 |
| Tgene | MTOR | GO:0031667 | response to nutrient levels | 29750193 |
| Tgene | MTOR | GO:0034198 | cellular response to amino acid starvation | 22424946 |
| Tgene | MTOR | GO:0038202 | TORC1 signaling | 28223137 |
| Tgene | MTOR | GO:0043200 | response to amino acid | 18497260 |
| Tgene | MTOR | GO:0045727 | positive regulation of translation | 18762023 |
| Tgene | MTOR | GO:0046777 | protein autophosphorylation | 15467718 |
| Tgene | MTOR | GO:0071230 | cellular response to amino acid stimulus | 22424946 |
| Tgene | MTOR | GO:0071233 | cellular response to leucine | 22424946 |
| Tgene | MTOR | GO:1990253 | cellular response to leucine starvation | 22424946 |
| Fusion gene breakpoints across CHD1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across MTOR (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | LAML | TCGA-AB-2939-03A | CHD1 | chr5 | 98199112 | - | MTOR | chr1 | 11273623 | - |
| ChimerDB4 | LAML | TCGA-AB-2939_61FFWAAXX_7 | CHD1 | chr5 | 98199112 | - | MTOR | chr1 | 11273623 | - |
| ChimerDB4 | LAML | TCGA-AB-2939_61FFWAAXX_7 | CHD1 | chr5 | 98204199 | - | MTOR | chr1 | 11273623 | - |
| ChimerDB4 | LAML | TCGA-AB-2939_704G6AAXX_7 | CHD1 | chr5 | 98199112 | - | MTOR | chr1 | 11273623 | - |
| ChimerDB4 | LAML | TCGA-AB-2939 | CHD1 | chr5 | 98199111 | - | MTOR | chr1 | 11273623 | - |
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Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000284049 | CHD1 | chr5 | 98204199 | - | ENST00000361445 | MTOR | chr1 | 11273623 | - | 9881 | 4398 | 150 | 8930 | 2926 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >16279_16279_1_CHD1-MTOR_CHD1_chr5_98204199_ENST00000284049_MTOR_chr1_11273623_ENST00000361445_length(amino acids)=2926AA_BP=1416 MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGSQSESESDTSRENKVQAKPPKVDGAEFWKSS PSILAVQRSAILKKQQQQQQQQQHQASSNSGSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEEREKSSCDETES DYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEE FETIERFMDCRIGRKGATGATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETK RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTP FKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTL IDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIF SQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEM DIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI SFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGE LVHNGCIKALKDSSSGTERTGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSN LLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEALSGAGSSKRRKARAKKNKAMKSIKVKEE IKSDSSPLPSEKSDEDDDKLSESKSDGRERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSIEFWVMNTSIQSTIILLIEQIVVAL GGEFKLYLPQLIPHMLRVFMHDNSPGRIVSIKLLAAIQLFGANLDDYLHLLLPPIVKLFDAPEAPLPSRKAALETVDRLTESLDFTDYAS RIIHPIVRTLDQSPELRSTAMDTLSSLVFQLGKKYQIFIPMVNKVLVRHRINHQRYDVLICRIVKGYTLADEEEDPLIYQHRMLRSGQGD ALASGPVETGPMKKLHVSTINLQKAWGAARRVSKDDWLEWLRRLSLELLKDSSSPSLRSCWALAQAYNPMARDLFNAAFVSCWSELNEDQ QDELIRSIELALTSQDIAEVTQTLLNLAEFMEHSDKGPLPLRDDNGIVLLGERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKL QQPEAAAGVLEYAMKHFGELEIQATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCCEKWTLVNDETQAKMA RMAAAAAWGLGQWDSMEEYTCMIPRDTHDGAFYRAVLALHQDLFSLAQQCIDKARDLLDAELTAMAGESYSRAYGAMVSCHMLSELEEVI QYKLVPERREIIRQIWWERLQGCQRIVEDWQKILMVRSLVVSPHEDMRTWLKYASLCGKSGRLALAHKTLVLLLGVDPSRQLDHPLPTVH PQVTYAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATEDQQHKQELHKLMARCFLKLGEWQLNLQGINESTIPKVLQYYSAATEHD RSWYKAWHAWAVMNFEAVLHYKHQNQARDEKKKLRHASGANITNATTAATTAATATTTASTEGSNSESEAESTENSPTPSPLQKKVTEDL SKTLLMYTVPAVQGFFRSISLSRGNNLQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQIDTWLQVIPQLIARIDTPRPLVGRLIHQLLTD IGRYHPQALIYPLTVASKSTTTARHNAANKILKNMCEHSNTLVQQAMMVSEELIRVAILWHEMWHEGLEEASRLYFGERNVKGMFEVLEP LHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRISKQLPQLTSLELQYVSPKLLMCRDLELAVPGT YDPNQPIIRIQSIAPSLQVITSKQRPRKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVIPLSTN SGLIGWVPHCDTLHALIRDYREKKKILLNIEHRIMLRMAPDYDHLTLMQKVEVFEHAVNNTAGDDLAKLLWLKSPSSEVWFDRRTNYTRS LAVMSMVGYILGLGDRHPSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVMEVLREHKDS VMAVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKTGTTVPESIHSFIGDGLVKPEALNKKAIQIINR -------------------------------------------------------------- |
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Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr5:98199112/chr1:11273623) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CHD1 | MTOR |
| FUNCTION: DNA helicase which plays a role in chromatin-remodeling following DNA damage (PubMed:19661379, PubMed:29220653). Targeted to sites of DNA damage through interaction with poly(ADP-ribose) and functions to regulate chromatin during DNA repair (PubMed:19661379). Able to catalyze nucleosome sliding in an ATP-dependent manner (PubMed:19661379). Helicase activity is strongly stimulated upon poly(ADP-ribose)-binding (PubMed:19661379, PubMed:29220653). {ECO:0000269|PubMed:19661379, ECO:0000269|PubMed:29220653}. | 456 |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 117_137 | 1416.0 | 1711.0 | Compositional bias | Note=Ser-rich |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 1_70 | 1416.0 | 1711.0 | Compositional bias | Note=Ser-rich |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 272_364 | 1416.0 | 1711.0 | Domain | Chromo 1 |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 389_452 | 1416.0 | 1711.0 | Domain | Chromo 2 |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 493_663 | 1416.0 | 1711.0 | Domain | Helicase ATP-binding |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 792_943 | 1416.0 | 1711.0 | Domain | Helicase C-terminal |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 614_617 | 1416.0 | 1711.0 | Motif | Note=DEAH box |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 506_513 | 1416.0 | 1711.0 | Nucleotide binding | ATP |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1382_1982 | 1039.0 | 2550.0 | Domain | FAT | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 2182_2516 | 1039.0 | 2550.0 | Domain | PI3K/PI4K | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 2517_2549 | 1039.0 | 2550.0 | Domain | FATC | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1069_1105 | 1039.0 | 2550.0 | Repeat | Note=HEAT 26 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1106_1144 | 1039.0 | 2550.0 | Repeat | Note=HEAT 27 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1145_1188 | 1039.0 | 2550.0 | Repeat | Note=HEAT 28 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1189_1225 | 1039.0 | 2550.0 | Repeat | Note=HEAT 29 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1226_1273 | 1039.0 | 2550.0 | Repeat | Note=HEAT 30 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1274_1311 | 1039.0 | 2550.0 | Repeat | Note=HEAT 31 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1312_1345 | 1039.0 | 2550.0 | Repeat | Note=HEAT 32 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1346_1382 | 1039.0 | 2550.0 | Repeat | Note=TPR 1 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1383_1408 | 1039.0 | 2550.0 | Repeat | Note=TPR 2 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1409_1442 | 1039.0 | 2550.0 | Repeat | Note=TPR 3 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1443_1473 | 1039.0 | 2550.0 | Repeat | Note=TPR 4 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1474_1507 | 1039.0 | 2550.0 | Repeat | Note=TPR 5 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1508_1541 | 1039.0 | 2550.0 | Repeat | Note=TPR 6 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1542_1574 | 1039.0 | 2550.0 | Repeat | Note=TPR 7 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1575_1614 | 1039.0 | 2550.0 | Repeat | Note=TPR 8 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1615_1649 | 1039.0 | 2550.0 | Repeat | Note=TPR 9 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1650_1693 | 1039.0 | 2550.0 | Repeat | Note=TPR 10 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1694_1731 | 1039.0 | 2550.0 | Repeat | Note=TPR 11 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1732_1786 | 1039.0 | 2550.0 | Repeat | Note=TPR 12 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1787_1846 | 1039.0 | 2550.0 | Repeat | Note=TPR 13 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1898_1930 | 1039.0 | 2550.0 | Repeat | Note=TPR 14 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1931_1970 | 1039.0 | 2550.0 | Repeat | Note=TPR 15 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1971_2005 | 1039.0 | 2550.0 | Repeat | Note=TPR 16 |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 1628_1644 | 1416.0 | 1711.0 | Region | Note=3 X 5 AA repeats of H-S-D-H-R |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 1628_1632 | 1416.0 | 1711.0 | Repeat | Note=1 |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 1634_1638 | 1416.0 | 1711.0 | Repeat | Note=2 |
| Hgene | CHD1 | chr5:98204199 | chr1:11273623 | ENST00000284049 | - | 30 | 35 | 1640_1644 | 1416.0 | 1711.0 | Repeat | Note=3 |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 100_137 | 1039.0 | 2550.0 | Repeat | Note=HEAT 3 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1029_1068 | 1039.0 | 2550.0 | Repeat | Note=HEAT 25 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 138_179 | 1039.0 | 2550.0 | Repeat | Note=HEAT 4 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 16_53 | 1039.0 | 2550.0 | Repeat | Note=HEAT 1 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 180_220 | 1039.0 | 2550.0 | Repeat | Note=HEAT 5 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 222_276 | 1039.0 | 2550.0 | Repeat | Note=HEAT 6 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 277_313 | 1039.0 | 2550.0 | Repeat | Note=HEAT 7 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 314_364 | 1039.0 | 2550.0 | Repeat | Note=HEAT 8 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 365_409 | 1039.0 | 2550.0 | Repeat | Note=HEAT 9 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 410_445 | 1039.0 | 2550.0 | Repeat | Note=HEAT 10 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 446_494 | 1039.0 | 2550.0 | Repeat | Note=HEAT 11 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 495_529 | 1039.0 | 2550.0 | Repeat | Note=HEAT 12 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 530_563 | 1039.0 | 2550.0 | Repeat | Note=HEAT 13 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 55_99 | 1039.0 | 2550.0 | Repeat | Note=HEAT 2 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 564_596 | 1039.0 | 2550.0 | Repeat | Note=HEAT 14 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 597_636 | 1039.0 | 2550.0 | Repeat | Note=HEAT 15 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 637_683 | 1039.0 | 2550.0 | Repeat | Note=HEAT 16 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 686_724 | 1039.0 | 2550.0 | Repeat | Note=HEAT 17 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 727_766 | 1039.0 | 2550.0 | Repeat | Note=HEAT 18 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 769_811 | 1039.0 | 2550.0 | Repeat | Note=HEAT 19 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 814_853 | 1039.0 | 2550.0 | Repeat | Note=HEAT 20 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 857_893 | 1039.0 | 2550.0 | Repeat | Note=HEAT 21 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 894_942 | 1039.0 | 2550.0 | Repeat | Note=HEAT 22 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 943_988 | 1039.0 | 2550.0 | Repeat | Note=HEAT 23 | |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 989_1027 | 1039.0 | 2550.0 | Repeat | Note=HEAT 24 |
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Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| CHD1 | |
| MTOR |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Tgene | MTOR | chr5:98204199 | chr1:11273623 | ENST00000361445 | 19 | 58 | 1_651 | 1039.0 | 2550.0 | NBN |
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Related Drugs to CHD1-MTOR |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to CHD1-MTOR |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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