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Fusion Protein:DCTN1-ALK |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: DCTN1-ALK | FusionPDB ID: 21668 | FusionGDB2.0 ID: 21668 | Hgene | Tgene | Gene symbol | DCTN1 | ALK | Gene ID | 1639 | 238 |
| Gene name | dynactin subunit 1 | ALK receptor tyrosine kinase | |
| Synonyms | DAP-150|DP-150|P135 | CD246|NBLST3 | |
| Cytomap | 2p13.1 | 2p23.2-p23.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | dynactin subunit 1150 kDa dynein-associated polypeptidedynactin 1 (p150, glued homolog, Drosophila) | ALK tyrosine kinase receptorCD246 antigenanaplastic lymphoma receptor tyrosine kinasemutant anaplastic lymphoma kinase | |
| Modification date | 20200319 | 20200329 | |
| UniProtAcc | Q14203 | Q96BT7 | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000361874, ENST00000394003, ENST00000407639, ENST00000409240, ENST00000409438, ENST00000409567, ENST00000409868, ENST00000495643, | ENST00000431873, ENST00000498037, ENST00000389048, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 7 X 12 X 5=420 | 56 X 74 X 20=82880 |
| # samples | 10 | 57 | |
| ** MAII score | log2(10/420*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(57/82880*10)=-7.18391827352181 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: DCTN1 [Title/Abstract] AND ALK [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | DCTN1(74596332)-ALK(29445266), # samples:1 DCTN1(74595911)-ALK(29446397), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | DCTN1 | GO:0031116 | positive regulation of microtubule polymerization | 23874158 |
| Hgene | DCTN1 | GO:0090063 | positive regulation of microtubule nucleation | 23874158 |
| Tgene | ALK | GO:0016310 | phosphorylation | 9174053 |
| Tgene | ALK | GO:0046777 | protein autophosphorylation | 9174053 |
| Fusion gene breakpoints across DCTN1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across ALK (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | inflammatory myofibroblastic tumor;myofibroblastic sarcoma | HQ993071 | DCTN1 | chr2 | 74596332 | ALK | chr2 | 29445266 | ||
| ChimerKB3 | . | . | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - |
| ChimerKB3 | . | . | DCTN1 | chr2 | 74596332 | - | ALK | chr2 | 29445266 | - |
| ChiTaRS5.0 | N/A | HQ993071 | DCTN1 | chr2 | 74595911 | - | ALK | chr2 | 29446397 | - |
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Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000394003 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5634 | 3493 | 318 | 5183 | 1621 |
| ENST00000361874 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5655 | 3514 | 318 | 5204 | 1628 |
| ENST00000407639 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5318 | 3177 | 254 | 4867 | 1537 |
| ENST00000409438 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5318 | 3177 | 254 | 4867 | 1537 |
| ENST00000409240 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5538 | 3397 | 39 | 5087 | 1682 |
| ENST00000409868 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5376 | 3235 | 45 | 4925 | 1626 |
| ENST00000409567 | DCTN1 | chr2 | 74592201 | - | ENST00000389048 | ALK | chr2 | 29446394 | - | 5539 | 3398 | 262 | 5088 | 1608 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >21668_21668_1_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000361874_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1628AA_BP=1055 MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVR QSQIQVFEDGADTTSPETPDSSASKVLKREGTDTTAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSS SEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQA DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQL KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNL EEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKF ELSENCSERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL TKAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDA PGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTM NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADER IEKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQME LQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKR EEERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPI AKKEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSK -------------------------------------------------------------- >21668_21668_2_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000394003_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1621AA_BP=1048 MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVR QSQIQVFEDGADTTSPETPDSSASKVLKREGTDTTAKTSKLAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPA QTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLK EARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQN ARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVREL RETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQ PPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCS ERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYY QHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAAL AFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMNKLATAM QEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTR LEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYK LSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPA APPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHD RGNLGLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSKNSMNQPG -------------------------------------------------------------- >21668_21668_3_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000407639_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1537AA_BP=964 MSPPPFPLFGLLPSLPSSVLPPCVCLSSSVPPLSSPCFLWFSAMMRQAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSS EPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQAD LQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLK QLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLE EKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEAS VERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFE LSENCSERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLT KAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAP GIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMN KLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERI EKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMEL QSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKRE EERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIA KKEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSKN -------------------------------------------------------------- >21668_21668_4_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000409240_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1682AA_BP=1109 MCLIDVIPAAVGAQFSVRAGLREKRVHSTQNASGPLGRRVLGGPGRVWRRVGQPTRAGRAGPAPQGLGRRSSVGSELGAEPLTVQTPSGS RMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSP ETPDSSASKVLKREGTDTTAKTSKLPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKE EEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEM ATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLME KKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELR EQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQM EVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQLSFAAGLVYSLSLLQAT LHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSA LDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAA AAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEIT DAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQADIDQL EAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDL KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAI ILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRG PAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLE -------------------------------------------------------------- >21668_21668_5_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000409438_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1537AA_BP=964 MSPPPFPLFGLLPSLPSSVLPPCVCLSSSVPPLSSPCFLWFSAMMRQAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSS EPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQAD LQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLK QLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLE EKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEAS VERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFE LSENCSERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLT KAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAP GIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMN KLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERI EKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMEL QSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKRE EERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIA KKEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSKN -------------------------------------------------------------- >21668_21668_6_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000409567_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1608AA_BP=1035 MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVR QSQIQVFEDGADTTSPETPDSSASKVLKREGTDTTAKTSKLPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPV LTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAK ERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDL SSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEM NDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFA ETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQL SFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPE DCTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGPQVSDTLLDC RKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMNKLATAMQEGEYDAERPPSK PPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEK EFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDY NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM TQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPAAPPPLPTTSSGKA AKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGSCTVP -------------------------------------------------------------- >21668_21668_7_DCTN1-ALK_DCTN1_chr2_74592201_ENST00000409868_ALK_chr2_29446394_ENST00000389048_length(amino acids)=1626AA_BP=1053 MGAEPLTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQS QIQVFEDGADTTSPETPDSSASKVLKREGTDTTAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSSE PSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADL QRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQ LEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEE KVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASV ERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFEL SENCSERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTK AIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPG IPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMNK LATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIE KVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMELQ SPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREE ERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAK KEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSKNS -------------------------------------------------------------- |
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Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:74596332/chr2:29445266) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| DCTN1 | ALK |
| FUNCTION: Plays a key role in dynein-mediated retrograde transport of vesicles and organelles along microtubules by recruiting and tethering dynein to microtubules. Binds to both dynein and microtubules providing a link between specific cargos, microtubules and dynein. Essential for targeting dynein to microtubule plus ends, recruiting dynein to membranous cargos and enhancing dynein processivity (the ability to move along a microtubule for a long distance without falling off the track). Can also act as a brake to slow the dynein motor during motility along the microtubule (PubMed:25185702). Can regulate microtubule stability by promoting microtubule formation, nucleation and polymerization and by inhibiting microtubule catastrophe in neurons. Inhibits microtubule catastrophe by binding both to microtubules and to tubulin, leading to enhanced microtubule stability along the axon (PubMed:23874158). Plays a role in metaphase spindle orientation (PubMed:22327364). Plays a role in centriole cohesion and subdistal appendage organization and function. Its recruitment to the centriole in a KIF3A-dependent manner is essential for the maintenance of centriole cohesion and the formation of subdistal appendage. Also required for microtubule anchoring at the mother centriole (PubMed:23386061). Plays a role in primary cilia formation (PubMed:25774020). {ECO:0000269|PubMed:22327364, ECO:0000269|PubMed:23386061, ECO:0000269|PubMed:23874158, ECO:0000269|PubMed:25185702, ECO:0000269|PubMed:25774020}. | FUNCTION: Catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA via its methyltransferase domain (PubMed:20123966, PubMed:20308323, PubMed:31079898). Catalyzes the last step in the formation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA (PubMed:20123966, PubMed:20308323). Has a preference for tRNA(Arg) and tRNA(Glu), and does not bind tRNA(Lys)(PubMed:20308323). Binds tRNA and catalyzes the iron and alpha-ketoglutarate dependent hydroxylation of 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in tRNA via its dioxygenase domain, giving rise to 5-(S)-methoxycarbonylhydroxymethyluridine; has a preference for tRNA(Gly) (PubMed:21285950). Required for normal survival after DNA damage (PubMed:20308323). May inhibit apoptosis and promote cell survival and angiogenesis (PubMed:19293182). {ECO:0000269|PubMed:19293182, ECO:0000269|PubMed:20123966, ECO:0000269|PubMed:20308323, ECO:0000269|PubMed:21285950, ECO:0000269|PubMed:31079898}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Protein Structures |
| PDB and CIF files of the predicted fusion proteins * Here we show the 3D structure of the fusion proteins using Mol*. AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Model confidence is shown from the pLDDT values per residue. pLDDT corresponds to the model’s prediction of its score on the local Distance Difference Test. It is a measure of local accuracy (from AlphfaFold website). To color code individual residues, we transformed individual PDB files into CIF format. |
| Fusion protein PDB link (fusion AA seq ID in FusionPDB) | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | AA seq | Len(AA seq) |
| PDB file (956)CIF file (956) >>>956.cif | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - | MSPPPFPLFGLLPSLPSSVLPPCVCLSSSVPPLSSPCFLWFSAMMRQAPT ARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPL AAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAED KAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKE RYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEI LKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKL QKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVE MLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDM AGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEAS VERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAF MPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPG LRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPE MSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPED CTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSC SDIRQFCKKIRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVL QEVAAAAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQ SCNILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGL GLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERI EKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQS KRTIEGLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKL RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEG QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI EYCTQDPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKRE EERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQS NPPSELHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNL GLEGSCTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVN | 1537 |
| 3D view using mol* of 956 (AA BP:) | ||||||||||
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| PDB file (972)CIF file (972) >>>972.cif | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - | MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGAT LFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDG ADTTSPETPDSSASKVLKREGTDTTAKTSKLPTRPASTGVAGASSSLGPS GSASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGL RAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQA DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAES LQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARL KDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAE STIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEM NDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKY RQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFAETKAHAKAIE MELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAE LIRKQAQEKFELSENCSERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRY EHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL TKAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAF LQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFG PQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLLVAALEELA FKASEQIYGTPSSSPYECLRQSCNILISTMNKLATAMQEGEYDAERPPSK PPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEAN VRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQ ADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGVYRRK HQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVP RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM TQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEKVP VRPKDPEGVPPLLVSQQAKREEERSPAAPPPLPTTSSGKAAKKPTAAEIS VRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWNPTYGSWFT EKPTKKNNPIAKKEPHDRGNLGLEGSCTVPPNVATGRLPGASLLLEPSSL TANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAPGAGHYEDTILKSK | 1608 |
| 3D view using mol* of 972 (AA BP:) | ||||||||||
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| PDB file (974) >>>974.pdbFusion protein BP residue: 1048 CIF file (974) >>>974.cif | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - | MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGAT LFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDG ADTTSPETPDSSASKVLKREGTDTTAKTSKLAPTARKTTTRRPKPTRPAS TGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAV PPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQ VQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMA TLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS YQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQ QRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVREL RETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQ ETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKI KFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVL VLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQLSFAAGLV YSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLH KDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSAL DCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIRRRMPG TDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAE NEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMNKLATAM QEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKK SLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRK KEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIA TLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYCFA GKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAV KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRD IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPI EYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPAAPPPLPTTSS GKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKP TSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGSCTVPPNVATGR LPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLEAATAP | 1621 |
| 3D view using mol* of 974 (AA BP:1048) | ||||||||||
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| PDB file (975)CIF file (975) >>>975.cif | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - | MGAEPLTVQTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLF ATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGAD TTSPETPDSSASKVLKREGTDTTAKTSKLRGLKPKKAPTARKTTTRRPKP TRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLT SPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHK IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD AIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSD GAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQEL EVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEE KVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKR VEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPET FDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGD HDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQLSF AAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFL IELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTMQLADHIKF TQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKKIR RRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLI APLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTMNK LATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVI KELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQ ALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRGPP PSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNP NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVIN TALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPAAPPPL PTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHG SRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGSCTVPPN VATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLPLE | 1626 |
| 3D view using mol* of 975 (AA BP:) | ||||||||||
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| PDB file (976)CIF file (976) >>>976.cif | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - | MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGAT LFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDG ADTTSPETPDSSASKVLKREGTDTTAKTSKLRGLKPKKAPTARKTTTRRP KPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPV LTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEK HKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKG SDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQ ELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNL EEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQ KRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPP ETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG GDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQL SFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLD FLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTMQLADHI KFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQFCKK IRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQ LIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNILISTM NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRET VIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEE TQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIEGLRG PPPSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDY NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV INTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSPAAPP PLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSELHKV HGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGSCTVP PNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQQGLP | 1628 |
| 3D view using mol* of 976 (AA BP:) | ||||||||||
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| PDB file (986)CIF file (986) >>>986.cif | DCTN1 | chr2 | 74592201 | - | ALK | chr2 | 29446394 | - | MCLIDVIPAAVGAQFSVRAGLREKRVHSTQNASGPLGRRVLGGPGRVWRR VGQPTRAGRAGPAPQGLGRRSSVGSELGAEPLTVQTPSGSRMSAEASARP LRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGR KYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKREGTDTTA KTSKLPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPII PTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLK ELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEE MADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEI EEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLME KKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDR NLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARV REAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQ QPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSF LRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAA GEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHE RSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTMQL ADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDIALLLRDLETSCSDIRQ FCKKIRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAA AAAQLIAPLAENEGLLVAALEELAFKASEQIYGTPSSSPYECLRQSCNIL ISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLE DRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQT RLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQSKRTIE GLRGPPPSGIATLVSGIAGVYRRKHQELQAMQMELQSPEYKLSKLRTSTI MTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ DPDVINTALPIEYGPLVEEEEKVPVRPKDPEGVPPLLVSQQAKREEERSP AAPPPLPTTSSGKAAKKPTAAEISVRVPRGPAVEGGHVNMAFSQSNPPSE LHKVHGSRNKPTSLWNPTYGSWFTEKPTKKNNPIAKKEPHDRGNLGLEGS CTVPPNVATGRLPGASLLLEPSSLTANMKEVPLFRLRHFPCGNVNYGYQQ | 1682 |
| 3D view using mol* of 986 (AA BP:) | ||||||||||
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pLDDT score distribution |
| pLDDT score distribution of the predicted wild-type structures of two partner proteins from AlphaFold2 * AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. |
ALK_pLDDT.png  |
| pLDDT score distribution of the predicted fusion protein structures from AlphaFold2 * AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. |
DCTN1_ALK_956_pLDDT_and_active_sites.png (AA BP:) |
DCTN1_ALK_956_violinplot.png (AA BP:) |
DCTN1_ALK_972_pLDDT_and_active_sites.png (AA BP:) |
DCTN1_ALK_972_violinplot.png (AA BP:) |
DCTN1_ALK_974_pLDDT.png (AA BP:1048) |
DCTN1_ALK_974_pLDDT_and_active_sites.png (AA BP:1048) |
DCTN1_ALK_974_violinplot.png (AA BP:1048) |
DCTN1_ALK_975_pLDDT_and_active_sites.png (AA BP:) |
DCTN1_ALK_975_violinplot.png (AA BP:) |
DCTN1_ALK_976_pLDDT_and_active_sites.png (AA BP:) |
DCTN1_ALK_976_violinplot.png (AA BP:) |
DCTN1_ALK_986_pLDDT_and_active_sites.png (AA BP:) |
DCTN1_ALK_986_violinplot.png (AA BP:) |
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Ramachandran Plot of Fusion Protein Structure |
| Ramachandran plot of the torsional angles - phi (φ)and psi (ψ) - of the residues (amino acids) contained in this fusion protein peptide. |
| Fusion AA seq ID in FusionPDB and their Ramachandran plots |
| DCTN1_ALK_974.png |
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Potential Active Site Information |
| The potential binding sites of these fusion proteins were identified using SiteMap, a module of the Schrodinger suite. |
| Fusion AA seq ID in FusionPDB | Site score | Size | D score | Volume | Exposure | Enclosure | Contact | Phobic | Philic | Balance | Don/Acc | Residues |
| 956 | 1.038 | 201 | 1.075 | 562.863 | 0.525 | 0.714 | 0.908 | 0.868 | 0.899 | 0.966 | 0.744 | Chain A: 1000,1001,1003,1004,1005,1006,1007,1008,1 009,1010,1013,1014,1015,1017,1018,1019,1020,1021,1 022,1083,1086,1087,1090,1091,1162,1163,1164,1165,1 188,1189,1191,1192 |
| 972 | 1.012 | 136 | 1.071 | 613.284 | 0.731 | 0.64 | 0.737 | 0.477 | 0.775 | 0.615 | 1.193 | Chain A: 549,553,556,557,560,561,564,577,579,583,5 84,587,590,594,598,669,673,674,676,677,680,681,683 ,684,687,688,1566,1567,1568,1570,1572,1574 |
| 974 | 1.041 | 392 | 1.115 | 1038.261 | 0.618 | 0.649 | 0.847 | 1.032 | 0.657 | 1.572 | 1.023 | Chain A: 484,487,488,562,563,566,567,570,571,573,5 74,577,578,581,582,583,584,585,586,587,589,590,591 ,592,596,597,600,603,604,607,611,682,683,686,687,6 88,689,690,691,693,694,696,697,700,701,712,715,924 ,925,928,1568,1569,1570,1571,1572,1573,1574,1575,1 576,1578,1579,1580,1581,1582,1583,1584,1585,1586,1 587,1588 |
| 975 | 1.059 | 121 | 1.128 | 234.269 | 0.518 | 0.68 | 0.865 | 1.257 | 0.673 | 1.867 | 1.013 | Chain A: 583,586,587,589,590,591,592,594,595,1572, 1573,1574,1575,1576,1577,1578,1579,1580,1581,1582, 1583 |
| 976 | 1.05 | 330 | 1.121 | 1188.495 | 0.642 | 0.666 | 0.832 | 0.884 | 0.672 | 1.315 | 1.231 | Chain A: 484,487,488,491,569,573,577,580,581,584,5 85,588,589,591,592,593,594,595,596,597,598,599,603 ,604,607,610,614,618,689,693,696,697,703,704,707,9 32,935,936,939,1513,1514,1515,1574,1575,1576,1577, 1578,1579,1580,1581,1582,1583,1584,1585,1586,1587, 1588,1590,1592 |
| 986 | 1.007 | 478 | 1.044 | 1673.84 | 0.634 | 0.672 | 0.833 | 0.563 | 0.917 | 0.614 | 0.719 | Chain A: 527,531,532,534,535,537,538,1000,1003,100 4,1007,1008,1010,1011,1014,1182,1184,1185,1186,118 7,1188,1189,1192,1194,1210,1212,1221,1229,1242,125 8,1259,1260,1261,1262,1264,1265,1267,1268,1271,127 4,1275,1309,1311,1313,1314,1315,1316,1318,1331,133 2,1333,1334,1335,1336,1337,1338,1341,1342,1345,134 6,1347,1348,1349,1351,1352,1353,1354,1355,1356,135 7,1363,1382,1383,1385,1386,1387,1388,1389,1390,139 1,1393,1394,1395,1396,1397,1398,1399,1413,1414,145 9,1460,1461,1462,1463,1560,1562,1563,1564,1565,156 6,1567,1568,1569,1570,1571,1572,1573,1574,1575 |
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Potentially Interacting Small Molecules through Virtual Screening |
| The FDA-approved small molecule library molecules were subjected to virtual screening using the Glide. |
| Fusion AA seq ID in FusionPDB | ZINC ID | DrugBank ID | Drug name | Docking score | Glide gscore |
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| Drug information from DrugBank of the top 20 interacting small molecules. |
| ZINC ID | DrugBank ID | Drug name | Drug type | SMILES | Drug group |
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Biochemical Features of Small Molecules |
| ADME (Absorption, Distribution, Metabolism, and Excretion) of drugs using QikProp(v3.9) |
| ZINC ID | mol_MW | dipole | SASA | FOSA | FISA | PISA | WPSA | volume | donorHB | accptHB | IP | Human Oral Absorption | Percent Human Oral Absorption | Rule Of Five | Rule Of Three |
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Drug Toxicity Information |
| Toxicity information of individual drugs using eToxPred |
| ZINC ID | Smile | Surface Accessibility | Toxicity |
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Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| DCTN1 | HAP1, GSTK1, BZW1, AKTIP, RFXANK, BBS4, VIM, DYNC1H1, DST, PLK1, KIF11, PAFAH1B1, RAB6A, GRB2, EPB41, SPTBN1, STAT1, FBXL5, MED14, Cep76, Actr1a, Dctn1, Dctn3, Capza1, Dctn2, DISC1, DTNBP1, DYNC1I1, NEK2, KIAA0408, CDC37, AKT1, PFDN1, PPP1CA, KIAA0368, CUL3, DYNLL1, DCTN1, DCTN2, SAP30BP, POLR2B, MCM3, RNF168, FLNC, MCCC1, RANBP9, STRN4, RBL2, SMURF1, Ccdc64, Ccdc64b, PEX14, ZNF512B, BBS1, FBXW4, MTERF1, LGR4, BICD2, DYNC1LI1, Bicd2, MAPT, MOV10, NXF1, CAPZA2, ACTR1B, CYFIP1, ACTR1A, CAPZB, CC2D1B, CCAR1, DCTN4, DNAJA2, DYNC1I2, PSMB6, PSMD11, SF3A3, SF3B3, EIF2A, PACSIN3, POP1, NTRK1, HSPB2, CEP170, NIN, ACTR10, AGK, AURKB, BTF3, BTF3L4, KNSTRN, TMEM256, CAMSAP2, CCNB1, CKAP2, CKAP2L, CLASP1, CLTC, CPVL, DCLK1, DCTN3, DCTN6, DNM2, EBNA1BP2, EML1, EML4, ERLIN2, FDXR, GPATCH1, GTSE1, HAUS8, HMMR, HYOU1, IGF2BP2, IPO7, IPO9, CEP170B, KIF2A, LASP1, LONP1, LUZP1, MAP1LC3B, MAP1S, MAP2, MAP7, MAP7D1, MAP7D2, MAP7D3, MAP9, MAPRE1, MAPRE2, MAPRE3, MTUS1, NAP1L1, NAP1L4, NMT1, NNT, NUBP2, PLEKHA5, PSMD14, PSMD7, RAB2A, RAB35, RAB8A, SDHC, SKA2, SKA3, SPAG5, SRSF2, EMC3, TRIM36, TSFM, UQCRC1, ZC3H15, ZNF622, ABRACL, ANXA1, ARHGEF2, HYPK, CAMSAP1, CC2D1A, CCDC124, CEP41, CEP44, CHTOP, CLASP2, CLIP1, DCDC2, DCLK2, DCTN5, DLGAP5, DVL1, FAM83D, GAS2L3, GPX1, HAUS4, HAUS6, HAUS7, CFAP97, KIF14, KIF2C, LSM14B, LTV1, MARK2, STK26, MTPN, NAA10, NAA15, NACA, NDC80, NDUFA5, NEBL, NEDD1, NPLOC4, PAPOLG, PDZD11, PRC1, SKA1, SLAIN2, SPC24, SRP9, SUPT16H, TBCEL, TDRD3, TSR1, TTF2, TTK, UPF1, YTHDC2, YTHDF1, YTHDF2, ZC2HC1A, DYNLT1, MYO19, SEC16A, TRIM29, Myo1c, Actr1b, Coro1c, Dctn5, Dynlrb1, Dctn4, Kctd5, Cenpe, Dync1li1, IRF3, SNW1, DCDC5, MYO6, DUSP12, DUSP13, KLHL2, MIPEP, RIC8A, DSTYK, C1orf106, PDGFD, RPS19BP1, C16orf45, ACTA2, CAPZA1, NINL, AHI1, CAMK2A, CYLD, TRIM25, UBE2A, HEY1, BRCA1, TES, WWC1, CFTR, ZNF598, EGLN3, PCBP1, UBE2M, EFTUD2, TNIP2, ESR2, NOD2, HEXIM1, MEPCE, LARP7, RNF181, MYC, HIST1H4A, HIST1H2BB, GRWD1, KIAA1429, ACTC1, GBF1, DYNC1LI2, DYNLRB1, CCDC88C, CCDC88A, HOOK3, HOOK1, APEX1, BIRC3, STAU1, KIAA1107, TRIM28, PLEKHA4, ENO3, TP53RK, CIT, KIF20A, FASN, SPHK2, Apc2, ORF6, CUL4A, HSPA12B, DDX58, UFL1, ABCF3, ANKRD28, ANKRD52, APC, ARHGAP21, CAMSAP3, CCSER2, CDC27, CENPE, CENPJ, CEP131, CEP162, CEP290, CEP350, CEP55, CEP72, DHX57, DNAJC21, EDF1, ESPL1, FAM161A, GEN1, GKAP1, JAKMIP1, MACF1, MAP1A, MAP4, MPHOSPH9, NAV1, NCKAP5L, NUF2, PPP6R1, PRR36, PSRC1, SH3PXD2B, SLAIN1, SOGA1, SPECC1, SPECC1L, SPICE1, SYNJ2, TMEM79, TRIM26, TTN, TUBB3, TXNL1, UBE2O, WDR62, ZC3H7A, CCDC138, DHX29, DIAPH3, ENSA, HAUS5, IBTK, IFT74, IPO8, KIAA1217, KIF1B, KIF7, OFD1, PAK4, PDLIM3, SH3D19, UPF3B, FZR1, FXR1, HOXA1, NAA40, SEPT14, ZKSCAN1, MAPK8IP3, FBXW7, CTIF, EEF1A1, BAG3, HDAC6, FBXO32, MISP, |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| DCTN1 |  |
| ALK |  |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs to DCTN1-ALK |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
| DCTN1 | ALK | Alectinib + Osimertinib | PubMed | 34964276 |
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Related Diseases to DCTN1-ALK |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| DCTN1 | ALK | Lung Cancer Brain Metastasis Patients | PubMed | 34964276 |
| DCTN1 | ALK | Lung Adenocarcinoma | MyCancerGenome | |
| DCTN1 | ALK | Acute Myeloid Leukemia | MyCancerGenome | |
| DCTN1 | ALK | Cancer Of Unknown Primary | MyCancerGenome | |
| DCTN1 | ALK | Diffuse Large B-Cell Lymphoma | MyCancerGenome |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | DCTN1 | C1868594 | Perry Syndrome | 11 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
| Hgene | DCTN1 | C1843315 | Neuronopathy, Distal Hereditary Motor, Type Viib | 8 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
| Hgene | DCTN1 | C1862939 | AMYOTROPHIC LATERAL SCLEROSIS 1 | 6 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
| Hgene | DCTN1 | C0002736 | Amyotrophic Lateral Sclerosis | 1 | ORPHANET |
| Hgene | DCTN1 | C0242422 | Parkinsonian Disorders | 1 | CTD_human |
| Hgene | DCTN1 | C0242423 | Ramsay Hunt Paralysis Syndrome | 1 | CTD_human |
| Hgene | DCTN1 | C0525045 | Mood Disorders | 1 | CTD_human |
| Hgene | DCTN1 | C0752097 | Autosomal Dominant Juvenile Parkinson Disease | 1 | CTD_human |
| Hgene | DCTN1 | C0752098 | Autosomal Dominant Parkinsonism | 1 | CTD_human |
| Hgene | DCTN1 | C0752100 | Autosomal Recessive Parkinsonism | 1 | CTD_human |
| Hgene | DCTN1 | C0752101 | Parkinsonism, Experimental | 1 | CTD_human |
| Hgene | DCTN1 | C0752104 | Familial Juvenile Parkinsonism | 1 | CTD_human |
| Hgene | DCTN1 | C0752105 | Parkinsonism, Juvenile | 1 | CTD_human |
| Hgene | DCTN1 | C1868675 | PARKINSON DISEASE 2, AUTOSOMAL RECESSIVE JUVENILE | 1 | CTD_human |
| Hgene | DCTN1 | C3203358 | Hypoventilation | 1 | CTD_human |
| Hgene | DCTN1 | C4749653 | Distal hereditary motor neuropathy type 7 | 1 | ORPHANET |
| Tgene | ALK | C0007131 | Non-Small Cell Lung Carcinoma | 28 | CGI;CTD_human |
| Tgene | ALK | C0027819 | Neuroblastoma | 13 | CGI;CTD_human;ORPHANET |
| Tgene | ALK | C0152013 | Adenocarcinoma of lung (disorder) | 8 | CGI;CTD_human |
| Tgene | ALK | C2751681 | NEUROBLASTOMA, SUSCEPTIBILITY TO, 3 | 8 | CLINGEN;UNIPROT |
| Tgene | ALK | C0206180 | Ki-1+ Anaplastic Large Cell Lymphoma | 6 | CGI;CTD_human |
| Tgene | ALK | C0334121 | Inflammatory Myofibroblastic Tumor | 4 | CGI;CTD_human;ORPHANET |
| Tgene | ALK | C0018199 | Granuloma, Plasma Cell | 3 | CTD_human |
| Tgene | ALK | C0007621 | Neoplastic Cell Transformation | 2 | CTD_human |
| Tgene | ALK | C0027627 | Neoplasm Metastasis | 2 | CTD_human |
| Tgene | ALK | C0238463 | Papillary thyroid carcinoma | 2 | ORPHANET |
| Tgene | ALK | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |
| Tgene | ALK | C0006118 | Brain Neoplasms | 1 | CGI;CTD_human |
| Tgene | ALK | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
| Tgene | ALK | C0007134 | Renal Cell Carcinoma | 1 | CTD_human |
| Tgene | ALK | C0011570 | Mental Depression | 1 | PSYGENET |
| Tgene | ALK | C0011581 | Depressive disorder | 1 | PSYGENET |
| Tgene | ALK | C0027643 | Neoplasm Recurrence, Local | 1 | CTD_human |
| Tgene | ALK | C0036341 | Schizophrenia | 1 | PSYGENET |
| Tgene | ALK | C0079744 | Diffuse Large B-Cell Lymphoma | 1 | CTD_human |
| Tgene | ALK | C0085269 | Plasma Cell Granuloma, Pulmonary | 1 | CTD_human |
| Tgene | ALK | C0153633 | Malignant neoplasm of brain | 1 | CGI;CTD_human |
| Tgene | ALK | C0278601 | Inflammatory Breast Carcinoma | 1 | CTD_human |
| Tgene | ALK | C0279702 | Conventional (Clear Cell) Renal Cell Carcinoma | 1 | CTD_human |
| Tgene | ALK | C0496899 | Benign neoplasm of brain, unspecified | 1 | CTD_human |
| Tgene | ALK | C0678222 | Breast Carcinoma | 1 | CTD_human |
| Tgene | ALK | C0750974 | Brain Tumor, Primary | 1 | CTD_human |
| Tgene | ALK | C0750977 | Recurrent Brain Neoplasm | 1 | CTD_human |
| Tgene | ALK | C0750979 | Primary malignant neoplasm of brain | 1 | CTD_human |
| Tgene | ALK | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
| Tgene | ALK | C1266042 | Chromophobe Renal Cell Carcinoma | 1 | CTD_human |
| Tgene | ALK | C1266043 | Sarcomatoid Renal Cell Carcinoma | 1 | CTD_human |
| Tgene | ALK | C1266044 | Collecting Duct Carcinoma of the Kidney | 1 | CTD_human |
| Tgene | ALK | C1306837 | Papillary Renal Cell Carcinoma | 1 | CTD_human |
| Tgene | ALK | C1332079 | Anaplastic Large Cell Lymphoma, ALK-Positive | 1 | ORPHANET |
| Tgene | ALK | C1458155 | Mammary Neoplasms | 1 | CTD_human |
| Tgene | ALK | C1527390 | Neoplasms, Intracranial | 1 | CTD_human |
| Tgene | ALK | C2931189 | Neural crest tumor | 1 | ORPHANET |
| Tgene | ALK | C3899155 | hereditary neuroblastoma | 1 | GENOMICS_ENGLAND |
| Tgene | ALK | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |
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