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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:DSTN-ITPR3

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: DSTN-ITPR3
FusionPDB ID: 24308
FusionGDB2.0 ID: 24308
HgeneTgene
Gene symbol

DSTN

ITPR3

Gene ID

11034

3710

Gene namedestrin, actin depolymerizing factorinositol 1,4,5-trisphosphate receptor type 3
SynonymsACTDP|ADF|HEL32|bA462D18.2IP3R|IP3R3
Cytomap

20p12.1

6p21.31

Type of geneprotein-codingprotein-coding
Descriptiondestrinactin-depolymerizing factorbA462D18.2 (destrin (actin depolymerizing factor ADF) (ACTDP))epididymis luminal protein 32epididymis secretory sperm binding proteininositol 1,4,5-trisphosphate receptor type 3IP3 receptorinositol 1,4,5-triphosphate receptor, type 3insP3R3type 3 InsP3 receptor
Modification date2020032720200313
UniProtAcc

P60981

Q14573

Ensembl transtripts involved in fusion geneENST idsENST00000474024, ENST00000246069, 
ENST00000374316, ENST00000605930, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score18 X 10 X 11=198010 X 11 X 4=440
# samples 2411
** MAII scorelog2(24/1980*10)=-3.04439411935845
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(11/440*10)=-2
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: DSTN [Title/Abstract] AND ITPR3 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)DSTN(17550856)-ITPR3(33638942), # samples:1
Anticipated loss of major functional domain due to fusion event.DSTN-ITPR3 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
DSTN-ITPR3 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneDSTN

GO:0030042

actin filament depolymerization

11812157

TgeneITPR3

GO:0051592

response to calcium ion

19052258


check buttonFusion gene breakpoints across DSTN (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across ITPR3 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-D7-A4Z0-01ADSTNchr20

17550856

+ITPR3chr6

33638942

+


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000246069DSTNchr2017550856+ENST00000374316ITPR3chr633638942+657334929857781826
ENST00000246069DSTNchr2017550856+ENST00000605930ITPR3chr633638942+656834929857781826

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000246069ENST00000374316DSTNchr2017550856+ITPR3chr633638942+0.0063535990.9936464
ENST00000246069ENST00000605930DSTNchr2017550856+ITPR3chr633638942+0.0064504090.99354964

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>24308_24308_1_DSTN-ITPR3_DSTN_chr20_17550856_ENST00000246069_ITPR3_chr6_33638942_ENST00000374316_length(amino acids)=1826AA_BP=1
MPAGSLPRVPATAAAKMVVSLAHNLIYFGFYSFSELLRLTRTLLGIIDCVQGPPAMLQAYEDPGGKNVRRSIQGVGHMMSTMVLSRKQSV
FSAPSLSAGASAAEPLDRSKFEENEDIVVMETKLKILEILQFILNVRLDYRISYLLSVFKKEFVEVFPMQDSGADGTAPAFDSTTANMNL
DRIGEQAEAMFGVGKTSSMLEVDDEGGRMFLRVLIHLTMHDYAPLVSGALQLLFKHFSQRQEAMHTFKQVQLLISAQDVENYKVIKSELD
RLRTMVEKSELWVDKKGSGKGEEVEAGAAKDKKERPTDEEGFLHPPGEKSSENYQIVKGILERLNKMCGVGEQMRKKQQRLLKNMDAHKV
MLDLLQIPYDKGDAKMMEILRYTHQFLQKFCAGNPGNQALLHKHLHLFLTPGLLEAETMQHIFLNNYQLCSEISEPVLQHFVHLLATHGR
HVQYLDFLHTVIKAEGKYVKKCQDMIMTELTNAGDDVVVFYNDKASLAHLLDMMKAARDGVEDHSPLMYHISLVDLLAACAEGKNVYTEI
KCTSLLPLEDVVSVVTHEDCITEVKMAYVNFVNHCYVDTEVEMKEIYTSNHIWTLFENFTLDMARVCSKREKRVADPTLEKYVLSVVLDT
INAFFSSPFSENSTSLQTHQTIVVQLLQSTTRLLECPWLQQQHKGSVEACIRTLAMVAKGRAILLPMDLDAHISSMLSSGASCAAAAQRN
ASSYKATTRAFPRVTPTANQWDYKNIIEKLQDIITALEERLKPLVQAELSVLVDVLHWPELLFLEGSEAYQRCESGGFLSKLIQHTKDLM
ESEEKLCIKVLRTLQQMLLKKTKYGDRGNQLRKMLLQNYLQNRKSTSRGDLPDPIGTGLDPDWSAIAATQCRLDKEGATKLVCDLITSTK
NEKIFQESIGLAIHLLDGGNTEIQKSFHNLMMSDKKSERFFKVLHDRMKRAQQETKSTVAVNMNDLGSQPHEDREPVDPTTKGRVASFSI
PGSSSRYSLGPSLRRGHEVSERVQSSEMGTSVLIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDIMCGSTTGGLGLL
GLYINEDNVGLVIQTLETLTEYCQGPCHENQTCIVTHESNGIDIITALILNDISPLCKYRMDLVLQLKDNASKLLLALMESRHDSENAER
ILISLRPQELVDVIKKAYLQEEERENSEVSPREVGHNIYILALQLSRHNKQLQHLLKPVKRIQEEEAEGISSMLSLNNKQLSQMLKSSAP
AQEEEEDPLAYYENHTSQIEIVRQDRSMEQIVFPVPGICQFLTEETKHRLFTTTEQDEQGSKVSDFFDQSSFLHNEMEWQRKLRSMPLIY
WFSRRMTLWGSISFNLAVFINIIIAFFYPYMEGASTGVLDSPLISLLFWILICFSIAALFTKRYSIRPLIVALILRSIYYLGIGPTLNIL
GALNLTNKIVFVVSFVGNRGTFIRGYKAMVMDMEFLYHVGYILTSVLGLFAHELFYSILLFDLIYREETLFNVIKSVTRNGRSILLTALL
ALILVYLFSIVGFLFLKDDFILEVDRLPNNHSTASPLGMPHGAAAFVDTCSGDKMDCVSGLSVPEVLEEDRELDSTERACDTLLMCIVTV
MNHGLRNGGGVGDILRKPSKDESLFPARVVYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQKKEEILKTTCFICGLERDKFDNKTVSF
EEHIKLEHNMWNYLYFIVLVRVKNKTDYTGPESYVAQMIKNKNLDWFPRMRAMSLVSNEGEGEQNEIRILQDKLNSTMKLVSHLTAQLNE

--------------------------------------------------------------

>24308_24308_2_DSTN-ITPR3_DSTN_chr20_17550856_ENST00000246069_ITPR3_chr6_33638942_ENST00000605930_length(amino acids)=1826AA_BP=1
MPAGSLPRVPATAAAKMVVSLAHNLIYFGFYSFSELLRLTRTLLGIIDCVQGPPAMLQAYEDPGGKNVRRSIQGVGHMMSTMVLSRKQSV
FSAPSLSAGASAAEPLDRSKFEENEDIVVMETKLKILEILQFILNVRLDYRISYLLSVFKKEFVEVFPMQDSGADGTAPAFDSTTANMNL
DRIGEQAEAMFGVGKTSSMLEVDDEGGRMFLRVLIHLTMHDYAPLVSGALQLLFKHFSQRQEAMHTFKQVQLLISAQDVENYKVIKSELD
RLRTMVEKSELWVDKKGSGKGEEVEAGAAKDKKERPTDEEGFLHPPGEKSSENYQIVKGILERLNKMCGVGEQMRKKQQRLLKNMDAHKV
MLDLLQIPYDKGDAKMMEILRYTHQFLQKFCAGNPGNQALLHKHLHLFLTPGLLEAETMQHIFLNNYQLCSEISEPVLQHFVHLLATHGR
HVQYLDFLHTVIKAEGKYVKKCQDMIMTELTNAGDDVVVFYNDKASLAHLLDMMKAARDGVEDHSPLMYHISLVDLLAACAEGKNVYTEI
KCTSLLPLEDVVSVVTHEDCITEVKMAYVNFVNHCYVDTEVEMKEIYTSNHIWTLFENFTLDMARVCSKREKRVADPTLEKYVLSVVLDT
INAFFSSPFSENSTSLQTHQTIVVQLLQSTTRLLECPWLQQQHKGSVEACIRTLAMVAKGRAILLPMDLDAHISSMLSSGASCAAAAQRN
ASSYKATTRAFPRVTPTANQWDYKNIIEKLQDIITALEERLKPLVQAELSVLVDVLHWPELLFLEGSEAYQRCESGGFLSKLIQHTKDLM
ESEEKLCIKVLRTLQQMLLKKTKYGDRGNQLRKMLLQNYLQNRKSTSRGDLPDPIGTGLDPDWSAIAATQCRLDKEGATKLVCDLITSTK
NEKIFQESIGLAIHLLDGGNTEIQKSFHNLMMSDKKSERFFKVLHDRMKRAQQETKSTVAVNMNDLGSQPHEDREPVDPTTKGRVASFSI
PGSSSRYSLGPSLRRGHEVSERVQSSEMGTSVLIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDIMCGSTTGGLGLL
GLYINEDNVGLVIQTLETLTEYCQGPCHENQTCIVTHESNGIDIITALILNDISPLCKYRMDLVLQLKDNASKLLLALMESRHDSENAER
ILISLRPQELVDVIKKAYLQEEERENSEVSPREVGHNIYILALQLSRHNKQLQHLLKPVKRIQEEEAEGISSMLSLNNKQLSQMLKSSAP
AQEEEEDPLAYYENHTSQIEIVRQDRSMEQIVFPVPGICQFLTEETKHRLFTTTEQDEQGSKVSDFFDQSSFLHNEMEWQRKLRSMPLIY
WFSRRMTLWGSISFNLAVFINIIIAFFYPYMEGASTGVLDSPLISLLFWILICFSIAALFTKRYSIRPLIVALILRSIYYLGIGPTLNIL
GALNLTNKIVFVVSFVGNRGTFIRGYKAMVMDMEFLYHVGYILTSVLGLFAHELFYSILLFDLIYREETLFNVIKSVTRNGRSILLTALL
ALILVYLFSIVGFLFLKDDFILEVDRLPNNHSTASPLGMPHGAAAFVDTCSGDKMDCVSGLSVPEVLEEDRELDSTERACDTLLMCIVTV
MNHGLRNGGGVGDILRKPSKDESLFPARVVYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQKKEEILKTTCFICGLERDKFDNKTVSF
EEHIKLEHNMWNYLYFIVLVRVKNKTDYTGPESYVAQMIKNKNLDWFPRMRAMSLVSNEGEGEQNEIRILQDKLNSTMKLVSHLTAQLNE

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr20:17550856/chr6:33638942)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
DSTN

P60981

ITPR3

Q14573

FUNCTION: Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers (G-actin). Acts in a pH-independent manner. {ECO:0000269|PubMed:11812157}.FUNCTION: Receptor for inositol 1,4,5-trisphosphate, a second messenger that mediates the release of intracellular calcium.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592224_2235862.02672.0Topological domainExtracellular
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592257_2264862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592286_2325862.02672.0Topological domainExtracellular
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592347_2368862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592390_2496862.02672.0Topological domainExtracellular
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592518_2671862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582224_2235862.02672.0Topological domainExtracellular
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582257_2264862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582286_2325862.02672.0Topological domainExtracellular
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582347_2368862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582390_2496862.02672.0Topological domainExtracellular
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582518_2671862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592203_2223862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592236_2256862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592265_2285862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592326_2346862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592369_2389862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620592497_2517862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582203_2223862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582236_2256862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582265_2285862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582326_2346862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582369_2389862.02672.0TransmembraneHelical
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019582497_2517862.02672.0TransmembraneHelical

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneDSTNchr20:17550856chr6:33638942ENST00000246069+144_1531.0166.0DomainADF-H
HgeneDSTNchr20:17550856chr6:33638942ENST00000246069+1430_341.0166.0MotifNuclear localization signal
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059113_173862.02672.0DomainMIR 1
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059174_224862.02672.0DomainMIR 2
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059232_288862.02672.0DomainMIR 3
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059295_372862.02672.0DomainMIR 4
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059378_434862.02672.0DomainMIR 5
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958113_173862.02672.0DomainMIR 1
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958174_224862.02672.0DomainMIR 2
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958232_288862.02672.0DomainMIR 3
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958295_372862.02672.0DomainMIR 4
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958378_434862.02672.0DomainMIR 5
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059266_270862.02672.0RegionInositol 1%2C4%2C5-trisphosphate binding
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059507_510862.02672.0RegionInositol 1%2C4%2C5-trisphosphate binding
TgeneITPR3chr20:17550856chr6:33638942ENST000003743162059567_569862.02672.0RegionInositol 1%2C4%2C5-trisphosphate binding
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958266_270862.02672.0RegionInositol 1%2C4%2C5-trisphosphate binding
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958507_510862.02672.0RegionInositol 1%2C4%2C5-trisphosphate binding
TgeneITPR3chr20:17550856chr6:33638942ENST000006059301958567_569862.02672.0RegionInositol 1%2C4%2C5-trisphosphate binding
TgeneITPR3chr20:17550856chr6:33638942ENST0000037431620591_2202862.02672.0Topological domainCytoplasmic
TgeneITPR3chr20:17550856chr6:33638942ENST0000060593019581_2202862.02672.0Topological domainCytoplasmic


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
DSTN
ITPR3


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to DSTN-ITPR3


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to DSTN-ITPR3


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource