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Fusion Protein:GPSM1-NUP214 |
Fusion Protein Summary |
Fusion gene summary |
Fusion partner gene information | Fusion gene name: GPSM1-NUP214 | FusionPDB ID: 34517 | FusionGDB2.0 ID: 34517 | Hgene | Tgene | Gene symbol | GPSM1 | NUP214 | Gene ID | 26086 | 8021 |
Gene name | G protein signaling modulator 1 | nucleoporin 214 | |
Synonyms | AGS3 | CAIN|CAN|IIAE9 | |
Cytomap | 9q34.3 | 9q34.13 | |
Type of gene | protein-coding | protein-coding | |
Description | G-protein-signaling modulator 1G-protein signalling modulator 1 (AGS3-like, C. elegans)activator of G-protein signaling 3 | nuclear pore complex protein Nup214CAN protein, putative oncogenenucleoporin 214kDa | |
Modification date | 20200313 | 20200322 | |
UniProtAcc | Q86YR5 | P35658 | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000392944, ENST00000429455, ENST00000440944, ENST00000392945, | ENST00000465486, ENST00000483497, ENST00000359428, ENST00000411637, ENST00000451030, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 2 X 3 X 2=12 | 19 X 26 X 11=5434 |
# samples | 3 | 29 | |
** MAII score | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(29/5434*10)=-4.22788976020704 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context (manual curation of fusion genes in FusionPDB) | PubMed: GPSM1 [Title/Abstract] AND NUP214 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | GPSM1(139252661)-NUP214(134002911), # samples:2 GPSM1(139251002)-NUP214(134002911), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | GPSM1-NUP214 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. GPSM1-NUP214 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. GPSM1-NUP214 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. GPSM1-NUP214 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. GPSM1-NUP214 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. GPSM1-NUP214 seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | GPSM1 | GO:0016239 | positive regulation of macroautophagy | 12642577 |
Hgene | GPSM1 | GO:0034260 | negative regulation of GTPase activity | 11024022 |
Hgene | GPSM1 | GO:1905098 | negative regulation of guanyl-nucleotide exchange factor activity | 11024022 |
Fusion gene breakpoints across GPSM1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across NUP214 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
Fusion gene information from FusionGDB2.0. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LGG | TCGA-HT-7873-01B | GPSM1 | chr9 | 139251002 | - | NUP214 | chr9 | 134002911 | + |
ChimerDB4 | LGG | TCGA-HT-7873-01B | GPSM1 | chr9 | 139252661 | + | NUP214 | chr9 | 134002911 | + |
ChimerDB4 | LGG | TCGA-HT-7873 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + |
ChimerDB4 | LGG | TCGA-HT-7873 | GPSM1 | chr9 | 139252661 | + | NUP214 | chr9 | 134002911 | + |
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Fusion ORF Analysis |
Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000440944 | GPSM1 | chr9 | 139251002 | + | ENST00000359428 | NUP214 | chr9 | 134002911 | + | 9452 | 2041 | 220 | 8268 | 2682 |
ENST00000440944 | GPSM1 | chr9 | 139251002 | + | ENST00000411637 | NUP214 | chr9 | 134002911 | + | 9415 | 2041 | 220 | 8238 | 2672 |
ENST00000440944 | GPSM1 | chr9 | 139251002 | + | ENST00000451030 | NUP214 | chr9 | 134002911 | + | 8486 | 2041 | 220 | 8271 | 2683 |
ENST00000429455 | GPSM1 | chr9 | 139251002 | + | ENST00000359428 | NUP214 | chr9 | 134002911 | + | 7876 | 465 | 33 | 6692 | 2219 |
ENST00000429455 | GPSM1 | chr9 | 139251002 | + | ENST00000411637 | NUP214 | chr9 | 134002911 | + | 7839 | 465 | 33 | 6662 | 2209 |
ENST00000429455 | GPSM1 | chr9 | 139251002 | + | ENST00000451030 | NUP214 | chr9 | 134002911 | + | 6910 | 465 | 33 | 6695 | 2220 |
ENST00000392944 | GPSM1 | chr9 | 139251002 | + | ENST00000359428 | NUP214 | chr9 | 134002911 | + | 7992 | 581 | 155 | 6808 | 2217 |
ENST00000392944 | GPSM1 | chr9 | 139251002 | + | ENST00000411637 | NUP214 | chr9 | 134002911 | + | 7955 | 581 | 155 | 6778 | 2207 |
ENST00000392944 | GPSM1 | chr9 | 139251002 | + | ENST00000451030 | NUP214 | chr9 | 134002911 | + | 7026 | 581 | 155 | 6811 | 2218 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000440944 | ENST00000359428 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003378964 | 0.996621 |
ENST00000440944 | ENST00000411637 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003371562 | 0.99662846 |
ENST00000440944 | ENST00000451030 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.00369346 | 0.99630654 |
ENST00000429455 | ENST00000359428 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003052846 | 0.9969471 |
ENST00000429455 | ENST00000411637 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003035554 | 0.9969644 |
ENST00000429455 | ENST00000451030 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003384307 | 0.9966157 |
ENST00000392944 | ENST00000359428 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.00335521 | 0.99664485 |
ENST00000392944 | ENST00000411637 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003334402 | 0.99666554 |
ENST00000392944 | ENST00000451030 | GPSM1 | chr9 | 139251002 | + | NUP214 | chr9 | 134002911 | + | 0.003690861 | 0.9963091 |
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Fusion Amino Acid Sequences |
For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >34517_34517_1_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000392944_NUP214_chr9_134002911_ENST00000359428_length(amino acids)=2217AA_BP=141 MDWGSTHERGEVRGSRRVPRSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFDLI ASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFA GGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPP FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAS TEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVKSL IKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYS SGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTA AATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKS LQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKTTLL EGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLFNTLAN NREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFLAK RKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLVHG SSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNNPA TPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGF NFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLETP PSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAAT STSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRST EEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVP PASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPV FGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASST PTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQ AASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKP TGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTT -------------------------------------------------------------- >34517_34517_2_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000392944_NUP214_chr9_134002911_ENST00000411637_length(amino acids)=2207AA_BP=141 MDWGSTHERGEVRGSRRVPRSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFDLI ASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFA GGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPP FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAS TEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVKSL IKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYS SGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSENSSQ SAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSAGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPAVAEKQG HQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKTTLLEGFAGVEEAR EQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLFNTLANNREIINQQRK RLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFLAKRKTPPVRSTA PASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLVHGSSPGVMGTSV ATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNNPATPSTAMGSSV PYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPTPS SNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELLFP SSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAATSTSSTAVFGS LPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPE KPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQ TAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAP SLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFG AASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIVFG QQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGS VASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTTSFGTLASQNA -------------------------------------------------------------- >34517_34517_3_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000392944_NUP214_chr9_134002911_ENST00000451030_length(amino acids)=2218AA_BP=141 MDWGSTHERGEVRGSRRVPRSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFDLI ASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFA GGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPP FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAS TEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVKSL IKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYS SGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTA AATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSAGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAK SLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKTTL LEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLFNTLA NNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFLA KRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLVH GSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNNP ATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTG FNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLET PPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAA TSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRS TEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAV PPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATP VFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASS TPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFG QAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQK PTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNT -------------------------------------------------------------- >34517_34517_4_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000429455_NUP214_chr9_134002911_ENST00000359428_length(amino acids)=2219AA_BP=143 MRSVWPSTQRGSLLLWRQPVIRSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFD LIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLV FAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAY HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPC PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA ASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVK SLIKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPS YSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKF TAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQA KSLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKTT LLEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLFNTL ANNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFL AKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLV HGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNN PATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGT GFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLE TPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPPA ATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGR STEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEA VPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSAT PVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPAS STPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVF GQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQ KPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSN -------------------------------------------------------------- >34517_34517_5_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000429455_NUP214_chr9_134002911_ENST00000411637_length(amino acids)=2209AA_BP=143 MRSVWPSTQRGSLLLWRQPVIRSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFD LIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLV FAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAY HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPC PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA ASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVK SLIKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPS YSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSENS SQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSAGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPAVAEK QGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKTTLLEGFAGVEE AREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLFNTLANNREIINQQ RKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNFLAKRKTPPVRS TAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLVHGSSPGVMGT SVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKNNPATPSTAMGS SVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPT PSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELL FPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAATSTSSTAVF GSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSAL PEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVP GQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAAST APSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSV FGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIV FGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGG GSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTTSFGTLASQ -------------------------------------------------------------- >34517_34517_6_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000429455_NUP214_chr9_134002911_ENST00000451030_length(amino acids)=2220AA_BP=143 MRSVWPSTQRGSLLLWRQPVIRSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMTASPQTEEFFD LIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLV FAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAY HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPC PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA ASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVK SLIKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPS YSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKF TAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSAGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQ AKSLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSLKT TLLEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLFNT LANNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRNF LAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHL VHGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQELKN NPATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSG TGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKL ETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPP AATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAG RSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTE AVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSA TPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPA SSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSV FGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGE QKPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSS -------------------------------------------------------------- >34517_34517_7_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000440944_NUP214_chr9_134002911_ENST00000359428_length(amino acids)=2682AA_BP=606 MAGPAPPVADELPGPAARRLYSRMEASCLELALEGERLCKAGDFKTGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEHGRALEYHK HDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAAVCCQRHLSIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAANATQDPGHLPPD VRETLCKASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGNAHVFLGRFDVAAE YYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQ EIGDRHGELTARMNVAQLQLVLGRLTSPAASEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHSGDWRGPSRDSLPLPV RSRKYQEGPDAERRPREGSHSPLDSADVRVHVPRTSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQP SMTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKER SSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF SNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQ YLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLS YIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVL CPFYMINQNPGVKSLIKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSS LKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPP STSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPR ITPPAAKPGSPQAKSLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETT ESLHGDISSLKTTLLEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRH LLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAK LSPMKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSL LPHAAPFAKSHLVHGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKN VPQVVNVQELKNNPATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASG QFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAP SGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPV TSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLS SATTPSLPMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEAT PATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFN QLTNNTATAPSATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQP GFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQ ASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAK TFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAA -------------------------------------------------------------- >34517_34517_8_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000440944_NUP214_chr9_134002911_ENST00000411637_length(amino acids)=2672AA_BP=606 MAGPAPPVADELPGPAARRLYSRMEASCLELALEGERLCKAGDFKTGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEHGRALEYHK HDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAAVCCQRHLSIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAANATQDPGHLPPD VRETLCKASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGNAHVFLGRFDVAAE YYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQ EIGDRHGELTARMNVAQLQLVLGRLTSPAASEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHSGDWRGPSRDSLPLPV RSRKYQEGPDAERRPREGSHSPLDSADVRVHVPRTSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQP SMTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKER SSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF SNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQ YLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLS YIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVL CPFYMINQNPGVKSLIKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSS LKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPP STSAVKVNLSENSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSAGRSAQGSSSPVPSMVQKSPRITPPAAKPGS PQAKSLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKETTESLHGDISSL KTTLLEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQRHLLVPERETLF NTLANNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLR NFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS HLVHGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLKNVPQVVNVQEL KNNPATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSP SGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSS KLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVA PPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMS AGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDAR TEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAP SATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQ PASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTG SVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSF GEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGS -------------------------------------------------------------- >34517_34517_9_GPSM1-NUP214_GPSM1_chr9_139251002_ENST00000440944_NUP214_chr9_134002911_ENST00000451030_length(amino acids)=2683AA_BP=606 MAGPAPPVADELPGPAARRLYSRMEASCLELALEGERLCKAGDFKTGVAFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLKEHGRALEYHK HDLLLARTIGDRMGEAKASGNLGNTLKVLGRFDEAAVCCQRHLSIAQEQGDKVGEARALYNIGNVYHAKGKQLSWNAANATQDPGHLPPD VRETLCKASEFYERNLSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGNAHVFLGRFDVAAE YYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLLIAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQ EIGDRHGELTARMNVAQLQLVLGRLTSPAASEKPDLAGYEAQGARPKRTQRLSAETWDLLRLPLEREQNGDSHHSGDWRGPSRDSLPLPV RSRKYQEGPDAERRPREGSHSPLDSADVRVHVPRTSIPRAPSSDEECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQP SMTASPQTEEFFDLIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQEPGDDFFNMLIKYQDFQFRALKKVRIFDSPEELPKER SSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF SNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQ YLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLS YIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVL CPFYMINQNPGVKSLIKTPERLSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSS LKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPP STSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSAGRSAQGSSSPVPSMVQKSP RITPPAAKPGSPQAKSLQPAVAEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKARTSKACFQVGTSEEMKMLRTESDDLHTFLLEIKET TESLHGDISSLKTTLLEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDQHLEQKKKQR HLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYKQTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPA KLSPMKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPS LLPHAAPFAKSHLVHGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMASQAPAVNTLTESTLK NVPQVVNVQELKNNPATPSTAMGSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSAS GQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVA PSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPP VTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLL SSATTPSLPMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEA TPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAF NQLTNNTATAPSATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQ PGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFC QASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGA KTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTA -------------------------------------------------------------- |
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Fusion Protein Functional Features |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:139252661/chr9:134002911) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
GPSM1 | NUP214 |
FUNCTION: Guanine nucleotide dissociation inhibitor (GDI) which functions as a receptor-independent activator of heterotrimeric G-protein signaling. Keeps G(i/o) alpha subunit in its GDP-bound form thus uncoupling heterotrimeric G-proteins signaling from G protein-coupled receptors. Controls spindle orientation and asymmetric cell fate of cerebral cortical progenitors. May also be involved in macroautophagy in intestinal cells. May play a role in drug addiction. {ECO:0000269|PubMed:11024022, ECO:0000269|PubMed:12642577}. | FUNCTION: Part of the nuclear pore complex (PubMed:9049309). Has a critical role in nucleocytoplasmic transport (PubMed:31178128). May serve as a docking site in the receptor-mediated import of substrates across the nuclear pore complex (PubMed:31178128, PubMed:8108440). {ECO:0000269|PubMed:31178128, ECO:0000269|PubMed:9049309, ECO:0000303|PubMed:8108440}.; FUNCTION: (Microbial infection) Required for capsid disassembly of the human adenovirus 5 (HadV-5) leading to release of the viral genome to the nucleus (in vitro). {ECO:0000269|PubMed:25410864}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- Retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 495_517 | 607.0 | 676.0 | Domain | GoLoco 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 548_570 | 607.0 | 676.0 | Domain | GoLoco 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 28_61 | 98.0 | 167.0 | Repeat | Note=TPR 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 66_99 | 98.0 | 167.0 | Repeat | Note=TPR 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 28_61 | 98.0 | 167.0 | Repeat | Note=TPR 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 66_99 | 98.0 | 167.0 | Repeat | Note=TPR 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 106_139 | 607.0 | 676.0 | Repeat | Note=TPR 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 146_181 | 607.0 | 676.0 | Repeat | Note=TPR 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 183_202 | 607.0 | 676.0 | Repeat | Note=TPR 5 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 209_242 | 607.0 | 676.0 | Repeat | Note=TPR 6 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 249_282 | 607.0 | 676.0 | Repeat | Note=TPR 7 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 289_322 | 607.0 | 676.0 | Repeat | Note=TPR 8 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 28_61 | 607.0 | 676.0 | Repeat | Note=TPR 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 329_362 | 607.0 | 676.0 | Repeat | Note=TPR 9 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 66_99 | 607.0 | 676.0 | Repeat | Note=TPR 2 |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 680_1209 | 15.0 | 2091.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 680_1209 | 15.0 | 2081.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 680_1209 | 15.0 | 2092.0 | Coiled coil | Ontology_term=ECO:0000269 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1213_2090 | 15.0 | 2091.0 | Compositional bias | Note=Pro/Ser/Thr-rich | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1213_2090 | 15.0 | 2081.0 | Compositional bias | Note=Pro/Ser/Thr-rich | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1213_2090 | 15.0 | 2092.0 | Compositional bias | Note=Pro/Ser/Thr-rich | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1409_2084 | 15.0 | 2091.0 | Region | Note=18 X 4 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1427_2085 | 15.0 | 2091.0 | Region | Note=11 X 3 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 236_1418 | 15.0 | 2091.0 | Region | 44 X 2 AA repeats of F-G | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 41_404 | 15.0 | 2091.0 | Region | Note=Seven-bladed beta propeller | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 450_586 | 15.0 | 2091.0 | Region | (Microbial infection) Binds human adenovirus 5 (HAdV-5) protein L3 (hexon) | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 481_2076 | 15.0 | 2091.0 | Region | Note=11 X 5 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 740_768 | 15.0 | 2091.0 | Region | Note=Leucine-zipper 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 861_882 | 15.0 | 2091.0 | Region | Note=Leucine-zipper 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1409_2084 | 15.0 | 2081.0 | Region | Note=18 X 4 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1427_2085 | 15.0 | 2081.0 | Region | Note=11 X 3 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 236_1418 | 15.0 | 2081.0 | Region | 44 X 2 AA repeats of F-G | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 41_404 | 15.0 | 2081.0 | Region | Note=Seven-bladed beta propeller | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 450_586 | 15.0 | 2081.0 | Region | (Microbial infection) Binds human adenovirus 5 (HAdV-5) protein L3 (hexon) | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 481_2076 | 15.0 | 2081.0 | Region | Note=11 X 5 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 740_768 | 15.0 | 2081.0 | Region | Note=Leucine-zipper 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 861_882 | 15.0 | 2081.0 | Region | Note=Leucine-zipper 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1409_2084 | 15.0 | 2092.0 | Region | Note=18 X 4 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1427_2085 | 15.0 | 2092.0 | Region | Note=11 X 3 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 236_1418 | 15.0 | 2092.0 | Region | 44 X 2 AA repeats of F-G | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 41_404 | 15.0 | 2092.0 | Region | Note=Seven-bladed beta propeller | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 450_586 | 15.0 | 2092.0 | Region | (Microbial infection) Binds human adenovirus 5 (HAdV-5) protein L3 (hexon) | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 481_2076 | 15.0 | 2092.0 | Region | Note=11 X 5 AA approximate repeats | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 740_768 | 15.0 | 2092.0 | Region | Note=Leucine-zipper 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 861_882 | 15.0 | 2092.0 | Region | Note=Leucine-zipper 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1225_1226 | 15.0 | 2091.0 | Repeat | 3 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1411_1412 | 15.0 | 2091.0 | Repeat | 4 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1427_1428 | 15.0 | 2091.0 | Repeat | 5 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1441_1442 | 15.0 | 2091.0 | Repeat | 6 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1473_1474 | 15.0 | 2091.0 | Repeat | 7 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 151_193 | 15.0 | 2091.0 | Repeat | Note=Blade 3 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1635_1636 | 15.0 | 2091.0 | Repeat | 8 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1674_1675 | 15.0 | 2091.0 | Repeat | 9 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1686_1687 | 15.0 | 2091.0 | Repeat | 10 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1713_1714 | 15.0 | 2091.0 | Repeat | 11 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1721_1722 | 15.0 | 2091.0 | Repeat | 12 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1726_1727 | 15.0 | 2091.0 | Repeat | 13 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1732_1733 | 15.0 | 2091.0 | Repeat | 14 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1756_1757 | 15.0 | 2091.0 | Repeat | 15 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1772_1773 | 15.0 | 2091.0 | Repeat | 16 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1786_1787 | 15.0 | 2091.0 | Repeat | 17 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1798_1799 | 15.0 | 2091.0 | Repeat | 18 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1806_1807 | 15.0 | 2091.0 | Repeat | 19 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1812_1813 | 15.0 | 2091.0 | Repeat | 20 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1819_1820 | 15.0 | 2091.0 | Repeat | 21 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1842_1843 | 15.0 | 2091.0 | Repeat | 22 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1851_1852 | 15.0 | 2091.0 | Repeat | 23 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1862_1863 | 15.0 | 2091.0 | Repeat | 24 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1874_1875 | 15.0 | 2091.0 | Repeat | 25 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1910_1911 | 15.0 | 2091.0 | Repeat | 26 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1922_1923 | 15.0 | 2091.0 | Repeat | 27 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1930_1931 | 15.0 | 2091.0 | Repeat | 28 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1938_1939 | 15.0 | 2091.0 | Repeat | 29 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 194_239 | 15.0 | 2091.0 | Repeat | Note=Blade 4 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1959_1960 | 15.0 | 2091.0 | Repeat | 30 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1970_1971 | 15.0 | 2091.0 | Repeat | 31 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1976_1977 | 15.0 | 2091.0 | Repeat | 32 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1982_1983 | 15.0 | 2091.0 | Repeat | 33 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1988_1989 | 15.0 | 2091.0 | Repeat | 34 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 1994_1995 | 15.0 | 2091.0 | Repeat | 35 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2012_2013 | 15.0 | 2091.0 | Repeat | 36 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2024_2025 | 15.0 | 2091.0 | Repeat | 37 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2026_2027 | 15.0 | 2091.0 | Repeat | 38 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2035_2036 | 15.0 | 2091.0 | Repeat | 39 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2046_2047 | 15.0 | 2091.0 | Repeat | 40 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2056_2057 | 15.0 | 2091.0 | Repeat | 41 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2066_2067 | 15.0 | 2091.0 | Repeat | 42 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2075_2076 | 15.0 | 2091.0 | Repeat | 43 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 2085_2086 | 15.0 | 2091.0 | Repeat | 44 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 240_303 | 15.0 | 2091.0 | Repeat | Note=Blade 5 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 304_359 | 15.0 | 2091.0 | Repeat | Note=Blade 6 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 360_404 | 15.0 | 2091.0 | Repeat | Note=Blade 7 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 41_93 | 15.0 | 2091.0 | Repeat | Note=Blade 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 484_485 | 15.0 | 2091.0 | Repeat | 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 548_549 | 15.0 | 2091.0 | Repeat | 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000359428 | 0 | 36 | 94_150 | 15.0 | 2091.0 | Repeat | Note=Blade 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1225_1226 | 15.0 | 2081.0 | Repeat | 3 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1411_1412 | 15.0 | 2081.0 | Repeat | 4 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1427_1428 | 15.0 | 2081.0 | Repeat | 5 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1441_1442 | 15.0 | 2081.0 | Repeat | 6 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1473_1474 | 15.0 | 2081.0 | Repeat | 7 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 151_193 | 15.0 | 2081.0 | Repeat | Note=Blade 3 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1635_1636 | 15.0 | 2081.0 | Repeat | 8 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1674_1675 | 15.0 | 2081.0 | Repeat | 9 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1686_1687 | 15.0 | 2081.0 | Repeat | 10 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1713_1714 | 15.0 | 2081.0 | Repeat | 11 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1721_1722 | 15.0 | 2081.0 | Repeat | 12 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1726_1727 | 15.0 | 2081.0 | Repeat | 13 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1732_1733 | 15.0 | 2081.0 | Repeat | 14 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1756_1757 | 15.0 | 2081.0 | Repeat | 15 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1772_1773 | 15.0 | 2081.0 | Repeat | 16 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1786_1787 | 15.0 | 2081.0 | Repeat | 17 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1798_1799 | 15.0 | 2081.0 | Repeat | 18 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1806_1807 | 15.0 | 2081.0 | Repeat | 19 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1812_1813 | 15.0 | 2081.0 | Repeat | 20 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1819_1820 | 15.0 | 2081.0 | Repeat | 21 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1842_1843 | 15.0 | 2081.0 | Repeat | 22 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1851_1852 | 15.0 | 2081.0 | Repeat | 23 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1862_1863 | 15.0 | 2081.0 | Repeat | 24 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1874_1875 | 15.0 | 2081.0 | Repeat | 25 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1910_1911 | 15.0 | 2081.0 | Repeat | 26 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1922_1923 | 15.0 | 2081.0 | Repeat | 27 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1930_1931 | 15.0 | 2081.0 | Repeat | 28 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1938_1939 | 15.0 | 2081.0 | Repeat | 29 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 194_239 | 15.0 | 2081.0 | Repeat | Note=Blade 4 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1959_1960 | 15.0 | 2081.0 | Repeat | 30 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1970_1971 | 15.0 | 2081.0 | Repeat | 31 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1976_1977 | 15.0 | 2081.0 | Repeat | 32 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1982_1983 | 15.0 | 2081.0 | Repeat | 33 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1988_1989 | 15.0 | 2081.0 | Repeat | 34 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 1994_1995 | 15.0 | 2081.0 | Repeat | 35 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2012_2013 | 15.0 | 2081.0 | Repeat | 36 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2024_2025 | 15.0 | 2081.0 | Repeat | 37 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2026_2027 | 15.0 | 2081.0 | Repeat | 38 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2035_2036 | 15.0 | 2081.0 | Repeat | 39 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2046_2047 | 15.0 | 2081.0 | Repeat | 40 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2056_2057 | 15.0 | 2081.0 | Repeat | 41 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2066_2067 | 15.0 | 2081.0 | Repeat | 42 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2075_2076 | 15.0 | 2081.0 | Repeat | 43 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 2085_2086 | 15.0 | 2081.0 | Repeat | 44 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 240_303 | 15.0 | 2081.0 | Repeat | Note=Blade 5 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 304_359 | 15.0 | 2081.0 | Repeat | Note=Blade 6 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 360_404 | 15.0 | 2081.0 | Repeat | Note=Blade 7 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 41_93 | 15.0 | 2081.0 | Repeat | Note=Blade 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 484_485 | 15.0 | 2081.0 | Repeat | 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 548_549 | 15.0 | 2081.0 | Repeat | 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000411637 | 0 | 36 | 94_150 | 15.0 | 2081.0 | Repeat | Note=Blade 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1225_1226 | 15.0 | 2092.0 | Repeat | 3 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1411_1412 | 15.0 | 2092.0 | Repeat | 4 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1427_1428 | 15.0 | 2092.0 | Repeat | 5 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1441_1442 | 15.0 | 2092.0 | Repeat | 6 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1473_1474 | 15.0 | 2092.0 | Repeat | 7 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 151_193 | 15.0 | 2092.0 | Repeat | Note=Blade 3 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1635_1636 | 15.0 | 2092.0 | Repeat | 8 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1674_1675 | 15.0 | 2092.0 | Repeat | 9 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1686_1687 | 15.0 | 2092.0 | Repeat | 10 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1713_1714 | 15.0 | 2092.0 | Repeat | 11 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1721_1722 | 15.0 | 2092.0 | Repeat | 12 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1726_1727 | 15.0 | 2092.0 | Repeat | 13 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1732_1733 | 15.0 | 2092.0 | Repeat | 14 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1756_1757 | 15.0 | 2092.0 | Repeat | 15 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1772_1773 | 15.0 | 2092.0 | Repeat | 16 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1786_1787 | 15.0 | 2092.0 | Repeat | 17 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1798_1799 | 15.0 | 2092.0 | Repeat | 18 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1806_1807 | 15.0 | 2092.0 | Repeat | 19 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1812_1813 | 15.0 | 2092.0 | Repeat | 20 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1819_1820 | 15.0 | 2092.0 | Repeat | 21 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1842_1843 | 15.0 | 2092.0 | Repeat | 22 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1851_1852 | 15.0 | 2092.0 | Repeat | 23 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1862_1863 | 15.0 | 2092.0 | Repeat | 24 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1874_1875 | 15.0 | 2092.0 | Repeat | 25 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1910_1911 | 15.0 | 2092.0 | Repeat | 26 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1922_1923 | 15.0 | 2092.0 | Repeat | 27 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1930_1931 | 15.0 | 2092.0 | Repeat | 28 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1938_1939 | 15.0 | 2092.0 | Repeat | 29 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 194_239 | 15.0 | 2092.0 | Repeat | Note=Blade 4 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1959_1960 | 15.0 | 2092.0 | Repeat | 30 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1970_1971 | 15.0 | 2092.0 | Repeat | 31 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1976_1977 | 15.0 | 2092.0 | Repeat | 32 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1982_1983 | 15.0 | 2092.0 | Repeat | 33 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1988_1989 | 15.0 | 2092.0 | Repeat | 34 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 1994_1995 | 15.0 | 2092.0 | Repeat | 35 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2012_2013 | 15.0 | 2092.0 | Repeat | 36 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2024_2025 | 15.0 | 2092.0 | Repeat | 37 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2026_2027 | 15.0 | 2092.0 | Repeat | 38 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2035_2036 | 15.0 | 2092.0 | Repeat | 39 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2046_2047 | 15.0 | 2092.0 | Repeat | 40 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2056_2057 | 15.0 | 2092.0 | Repeat | 41 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2066_2067 | 15.0 | 2092.0 | Repeat | 42 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2075_2076 | 15.0 | 2092.0 | Repeat | 43 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 2085_2086 | 15.0 | 2092.0 | Repeat | 44 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 240_303 | 15.0 | 2092.0 | Repeat | Note=Blade 5 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 304_359 | 15.0 | 2092.0 | Repeat | Note=Blade 6 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 360_404 | 15.0 | 2092.0 | Repeat | Note=Blade 7 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 41_93 | 15.0 | 2092.0 | Repeat | Note=Blade 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 484_485 | 15.0 | 2092.0 | Repeat | 1 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 548_549 | 15.0 | 2092.0 | Repeat | 2 | |
Tgene | NUP214 | chr9:139251002 | chr9:134002911 | ENST00000451030 | 0 | 36 | 94_150 | 15.0 | 2092.0 | Repeat | Note=Blade 2 |
- Not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 495_517 | 98.0 | 167.0 | Domain | GoLoco 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 548_570 | 98.0 | 167.0 | Domain | GoLoco 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 596_618 | 98.0 | 167.0 | Domain | GoLoco 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 630_652 | 98.0 | 167.0 | Domain | GoLoco 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 495_517 | 0 | 458.0 | Domain | GoLoco 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 548_570 | 0 | 458.0 | Domain | GoLoco 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 596_618 | 0 | 458.0 | Domain | GoLoco 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 630_652 | 0 | 458.0 | Domain | GoLoco 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 495_517 | 98.0 | 167.0 | Domain | GoLoco 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 548_570 | 98.0 | 167.0 | Domain | GoLoco 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 596_618 | 98.0 | 167.0 | Domain | GoLoco 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 630_652 | 98.0 | 167.0 | Domain | GoLoco 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 596_618 | 607.0 | 676.0 | Domain | GoLoco 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000440944 | + | 13 | 14 | 630_652 | 607.0 | 676.0 | Domain | GoLoco 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 106_139 | 98.0 | 167.0 | Repeat | Note=TPR 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 146_181 | 98.0 | 167.0 | Repeat | Note=TPR 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 183_202 | 98.0 | 167.0 | Repeat | Note=TPR 5 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 209_242 | 98.0 | 167.0 | Repeat | Note=TPR 6 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 249_282 | 98.0 | 167.0 | Repeat | Note=TPR 7 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 289_322 | 98.0 | 167.0 | Repeat | Note=TPR 8 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 329_362 | 98.0 | 167.0 | Repeat | Note=TPR 9 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 106_139 | 0 | 458.0 | Repeat | Note=TPR 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 146_181 | 0 | 458.0 | Repeat | Note=TPR 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 183_202 | 0 | 458.0 | Repeat | Note=TPR 5 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 209_242 | 0 | 458.0 | Repeat | Note=TPR 6 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 249_282 | 0 | 458.0 | Repeat | Note=TPR 7 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 289_322 | 0 | 458.0 | Repeat | Note=TPR 8 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 28_61 | 0 | 458.0 | Repeat | Note=TPR 1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 329_362 | 0 | 458.0 | Repeat | Note=TPR 9 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 66_99 | 0 | 458.0 | Repeat | Note=TPR 2 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 106_139 | 98.0 | 167.0 | Repeat | Note=TPR 3 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 146_181 | 98.0 | 167.0 | Repeat | Note=TPR 4 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 183_202 | 98.0 | 167.0 | Repeat | Note=TPR 5 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 209_242 | 98.0 | 167.0 | Repeat | Note=TPR 6 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 249_282 | 98.0 | 167.0 | Repeat | Note=TPR 7 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 289_322 | 98.0 | 167.0 | Repeat | Note=TPR 8 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 329_362 | 98.0 | 167.0 | Repeat | Note=TPR 9 |
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Fusion Protein-Protein Interaction |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
Gene | PPI interactors |
NUP214 | ZFP36, XPO1, NUP107, NXF2, NXF1, XPO5, CRM1, KAP104, IPO5, G3BP1, G3BP2, RAE1, APC, HDAC4, HDAC5, HDAC9, NUP88, SMAD1, Plk1, Nup88, Nup188, Nup214, CLEC4G, SMAD2, SMAD3, SMAD4, SIRT7, RANBP2, CUL3, CUL2, rev, NUPL2, NUP214, MEX67, ACOT13, PNPT1, HSPA1L, VPS4B, S100A6, EEF1A1, STRIP1, RPL19, NDUFA7, ITGA4, SOX2, LMNA, FBXO6, CUL7, OBSL1, NUP62, CLEC11A, DDX19A, KCMF1, CFL1, CSRP1, DYNC1LI1, TRIM28, TXNDC9, NTRK1, IFI16, NUP85, NUP35, KPNB1, UBE2I, NUPL1, NUP153, SEH1L, Ranbp2, Ube2i, Rcc1, Nup107, Kifc1, Nup155, Nup98, C11orf30, CDH1, RAN, FXR2, EMILIN1, SERPINB2, BRCA1, ORF10, CTNNB1, CUL4B, RNF31, ESR2, EZH2, SUZ12, MYC, CDK9, VCP, KIAA1429, NR2C2, HIST1H4A, PTPDC1, RHBDD1, RHBDF2, nsp9, BIRC3, LMBR1L, PLEKHA4, CYLD, ORF6, IMMP1L, IMMP2L, CTIF, DDX19B, GLE1, FARP1, Myo9b, ITSN1, PLEKHG6, ACACA, SUMO2, NFX1, NUPR1, DYRK1A, NUP155, SYNE3, NAA40, NXT2, SLFN11, CCNF, TAX1BP1, SIRT6, DVL2, ETV6, |
Protein-protein interactors based on sequence similarity (STRING) |
Gene | STRING network |
GPSM1 | |
NUP214 |
- Retained interactions in fusion protein (protein functional feature from UniProt). |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost interactions due to fusion (protein functional feature from UniProt). |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392944 | + | 3 | 4 | 364_487 | 98.0 | 167.0 | STK11/LKB1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000392945 | + | 1 | 9 | 364_487 | 0 | 458.0 | STK11/LKB1 |
Hgene | GPSM1 | chr9:139251002 | chr9:134002911 | ENST00000429455 | + | 3 | 4 | 364_487 | 98.0 | 167.0 | STK11/LKB1 |
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Related Drugs to GPSM1-NUP214 |
Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to GPSM1-NUP214 |
Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | NUP214 | C0025958 | Microcephaly | 1 | GENOMICS_ENGLAND |
Tgene | NUP214 | C0543888 | Epileptic encephalopathy | 1 | GENOMICS_ENGLAND |
Tgene | NUP214 | C1836830 | Developmental regression | 1 | GENOMICS_ENGLAND |
Tgene | NUP214 | C1961099 | Precursor T-Cell Lymphoblastic Leukemia-Lymphoma | 1 | ORPHANET |