UTHEALTH HOME ABOUT SBMI A-Z WEBMAIL INSIDE THE UNIVERSITY |
|
Fusion Protein:ITGA6-MYO3B |
Fusion Protein Summary |
Fusion gene summary |
Fusion partner gene information | Fusion gene name: ITGA6-MYO3B | FusionPDB ID: 40444 | FusionGDB2.0 ID: 40444 | Hgene | Tgene | Gene symbol | ITGA6 | MYO3B | Gene ID | 3655 | 140469 |
Gene name | integrin subunit alpha 6 | myosin IIIB | |
Synonyms | CD49f|ITGA6B|VLA-6 | - | |
Cytomap | 2q31.1 | 2q31.1 | |
Type of gene | protein-coding | protein-coding | |
Description | integrin alpha-6CD49 antigen-like family member Fintegrin alpha6Bintegrin, alpha 6 | myosin-IIIb | |
Modification date | 20200329 | 20200320 | |
UniProtAcc | P23229 | Q8WXR4 | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000264106, ENST00000264107, ENST00000343713, ENST00000375221, ENST00000409080, ENST00000409532, | ENST00000602629, ENST00000334231, ENST00000408978, ENST00000409044, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 10 X 8 X 6=480 | 4 X 5 X 3=60 |
# samples | 12 | 5 | |
** MAII score | log2(12/480*10)=-2 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context (manual curation of fusion genes in FusionPDB) | PubMed: ITGA6 [Title/Abstract] AND MYO3B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | ITGA6(173292698)-MYO3B(171191895), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | ITGA6-MYO3B seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ITGA6-MYO3B seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ITGA6-MYO3B seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ITGA6-MYO3B seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across ITGA6 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across MYO3B (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Top |
Fusion Gene Sample Information |
Fusion gene information from FusionGDB2.0. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | PRAD | TCGA-KK-A6E5-01A | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + |
Top |
Fusion ORF Analysis |
Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000264107 | ITGA6 | chr2 | 173292698 | - | ENST00000408978 | MYO3B | chr2 | 171191895 | + | 5053 | 416 | 0 | 3692 | 1230 |
ENST00000264107 | ITGA6 | chr2 | 173292698 | - | ENST00000409044 | MYO3B | chr2 | 171191895 | + | 4972 | 416 | 0 | 3611 | 1203 |
ENST00000264107 | ITGA6 | chr2 | 173292698 | - | ENST00000334231 | MYO3B | chr2 | 171191895 | + | 5724 | 416 | 0 | 3692 | 1230 |
ENST00000343713 | ITGA6 | chr2 | 173292698 | - | ENST00000408978 | MYO3B | chr2 | 171191895 | + | 5022 | 385 | 167 | 3661 | 1164 |
ENST00000343713 | ITGA6 | chr2 | 173292698 | - | ENST00000409044 | MYO3B | chr2 | 171191895 | + | 4941 | 385 | 167 | 3580 | 1137 |
ENST00000343713 | ITGA6 | chr2 | 173292698 | - | ENST00000334231 | MYO3B | chr2 | 171191895 | + | 5693 | 385 | 167 | 3661 | 1164 |
ENST00000264106 | ITGA6 | chr2 | 173292698 | - | ENST00000408978 | MYO3B | chr2 | 171191895 | + | 5022 | 385 | 167 | 3661 | 1164 |
ENST00000264106 | ITGA6 | chr2 | 173292698 | - | ENST00000409044 | MYO3B | chr2 | 171191895 | + | 4941 | 385 | 167 | 3580 | 1137 |
ENST00000264106 | ITGA6 | chr2 | 173292698 | - | ENST00000334231 | MYO3B | chr2 | 171191895 | + | 5693 | 385 | 167 | 3661 | 1164 |
ENST00000375221 | ITGA6 | chr2 | 173292698 | - | ENST00000408978 | MYO3B | chr2 | 171191895 | + | 5022 | 385 | 167 | 3661 | 1164 |
ENST00000375221 | ITGA6 | chr2 | 173292698 | - | ENST00000409044 | MYO3B | chr2 | 171191895 | + | 4941 | 385 | 167 | 3580 | 1137 |
ENST00000375221 | ITGA6 | chr2 | 173292698 | - | ENST00000334231 | MYO3B | chr2 | 171191895 | + | 5693 | 385 | 167 | 3661 | 1164 |
ENST00000409080 | ITGA6 | chr2 | 173292698 | - | ENST00000408978 | MYO3B | chr2 | 171191895 | + | 4819 | 182 | 0 | 3458 | 1152 |
ENST00000409080 | ITGA6 | chr2 | 173292698 | - | ENST00000409044 | MYO3B | chr2 | 171191895 | + | 4738 | 182 | 0 | 3377 | 1125 |
ENST00000409080 | ITGA6 | chr2 | 173292698 | - | ENST00000334231 | MYO3B | chr2 | 171191895 | + | 5490 | 182 | 0 | 3458 | 1152 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000264107 | ENST00000408978 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.00059 | 0.99941003 |
ENST00000264107 | ENST00000409044 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000790885 | 0.9992091 |
ENST00000264107 | ENST00000334231 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000318759 | 0.99968123 |
ENST00000343713 | ENST00000408978 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000564165 | 0.99943584 |
ENST00000343713 | ENST00000409044 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000757902 | 0.99924207 |
ENST00000343713 | ENST00000334231 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000304752 | 0.9996953 |
ENST00000264106 | ENST00000408978 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000564165 | 0.99943584 |
ENST00000264106 | ENST00000409044 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000757902 | 0.99924207 |
ENST00000264106 | ENST00000334231 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000304752 | 0.9996953 |
ENST00000375221 | ENST00000408978 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000564165 | 0.99943584 |
ENST00000375221 | ENST00000409044 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000757902 | 0.99924207 |
ENST00000375221 | ENST00000334231 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000304752 | 0.9996953 |
ENST00000409080 | ENST00000408978 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000401332 | 0.9995987 |
ENST00000409080 | ENST00000409044 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000540429 | 0.99945956 |
ENST00000409080 | ENST00000334231 | ITGA6 | chr2 | 173292698 | - | MYO3B | chr2 | 171191895 | + | 0.000221493 | 0.99977857 |
Top |
Fusion Amino Acid Sequences |
For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >40444_40444_1_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000264106_MYO3B_chr2_171191895_ENST00000334231_length(amino acids)=1164AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRS HSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTP -------------------------------------------------------------- >40444_40444_2_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000264106_MYO3B_chr2_171191895_ENST00000408978_length(amino acids)=1164AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRS HSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTP -------------------------------------------------------------- >40444_40444_3_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000264106_MYO3B_chr2_171191895_ENST00000409044_length(amino acids)=1137AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKNGHS QAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNGTLE -------------------------------------------------------------- >40444_40444_4_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000264107_MYO3B_chr2_171191895_ENST00000334231_length(amino acids)=1230AA_BP=139 LIKRLRVSREQRAHSAVASCPRGGAAGRRARPVPGVGPGAAARGGEGGCGSSSAAASDPARSAGRPLQVPAPLPVRPPMAAAGQLCLLYL SAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFNHFISQCLIKDFERRPSVTHLLDHP FIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDEDTIIHQLQKRYADLLIYTYVGDILI ALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKANNQTLREKILQV NSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSDFRLPEEKPPRYI ADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQNAASVLCISPEEL QEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENFQRNSFEQLCINI ANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRCKYFWRPKGVELC FGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKAKVDTLEVIRHPE ETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILFEEFVKRYYYLAF TAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREKGAIAIQSAWRGY DARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKN GHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNG -------------------------------------------------------------- >40444_40444_5_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000264107_MYO3B_chr2_171191895_ENST00000408978_length(amino acids)=1230AA_BP=139 LIKRLRVSREQRAHSAVASCPRGGAAGRRARPVPGVGPGAAARGGEGGCGSSSAAASDPARSAGRPLQVPAPLPVRPPMAAAGQLCLLYL SAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFNHFISQCLIKDFERRPSVTHLLDHP FIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDEDTIIHQLQKRYADLLIYTYVGDILI ALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKANNQTLREKILQV NSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSDFRLPEEKPPRYI ADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQNAASVLCISPEEL QEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENFQRNSFEQLCINI ANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRCKYFWRPKGVELC FGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKAKVDTLEVIRHPE ETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILFEEFVKRYYYLAF TAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREKGAIAIQSAWRGY DARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKN GHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNG -------------------------------------------------------------- >40444_40444_6_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000264107_MYO3B_chr2_171191895_ENST00000409044_length(amino acids)=1203AA_BP=139 LIKRLRVSREQRAHSAVASCPRGGAAGRRARPVPGVGPGAAARGGEGGCGSSSAAASDPARSAGRPLQVPAPLPVRPPMAAAGQLCLLYL SAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFNHFISQCLIKDFERRPSVTHLLDHP FIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDEDTIIHQLQKRYADLLIYTYVGDILI ALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKANNQTLREKILQV NSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSDFRLPEEKPPRYI ADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQNAASVLCISPEEL QEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENFQRNSFEQLCINI ANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRCKYFWRPKGVELC FGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKAKVDTLEVIRHPE ETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILFEEFVKRYYYLAF TAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREKGAIAIQSGDTSN QSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGT DLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNGTLEYQGSKRKPRKLGQIKVLDGEDEYY -------------------------------------------------------------- >40444_40444_7_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000343713_MYO3B_chr2_171191895_ENST00000334231_length(amino acids)=1164AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRS HSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTP -------------------------------------------------------------- >40444_40444_8_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000343713_MYO3B_chr2_171191895_ENST00000408978_length(amino acids)=1164AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRS HSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTP -------------------------------------------------------------- >40444_40444_9_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000343713_MYO3B_chr2_171191895_ENST00000409044_length(amino acids)=1137AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKNGHS QAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNGTLE -------------------------------------------------------------- >40444_40444_10_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000375221_MYO3B_chr2_171191895_ENST00000334231_length(amino acids)=1164AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRS HSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTP -------------------------------------------------------------- >40444_40444_11_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000375221_MYO3B_chr2_171191895_ENST00000408978_length(amino acids)=1164AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRS HSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTP -------------------------------------------------------------- >40444_40444_12_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000375221_MYO3B_chr2_171191895_ENST00000409044_length(amino acids)=1137AA_BP=73 MQVPAPLPVRPPMAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFN HFISQCLIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDED TIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAH LIVQHLTFLGKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYI YAGLHHQKKLSDFRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTD KSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMN VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ TLVDKFEDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVAS SSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVS IRRQGYSHRILFEEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGA RRYKRVREKREKGAIAIQSGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKNGHS QAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNGTLE -------------------------------------------------------------- >40444_40444_13_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000409080_MYO3B_chr2_171191895_ENST00000334231_length(amino acids)=1152AA_BP=61 MAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFNHFISQCLIKDFE RRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDEDTIIHQLQKRYAD LLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKA NNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSD FRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQN AASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENF QRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRC KYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKA KVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILF EEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREK GAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQ TSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSS -------------------------------------------------------------- >40444_40444_14_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000409080_MYO3B_chr2_171191895_ENST00000408978_length(amino acids)=1152AA_BP=61 MAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFNHFISQCLIKDFE RRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDEDTIIHQLQKRYAD LLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKA NNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSD FRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQN AASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENF QRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRC KYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKA KVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILF EEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREK GAIAIQSAWRGYDARRKFKKISNRRNESAAHNQAGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQ TSSNSPAVTEKNGHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSS -------------------------------------------------------------- >40444_40444_15_ITGA6-MYO3B_ITGA6_chr2_173292698_ENST00000409080_MYO3B_chr2_171191895_ENST00000409044_length(amino acids)=1125AA_BP=61 MAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVIRKYGDPGSLFGFSLAMHWQLQPEDKRLNPPPTLLHPEKWCEEFNHFISQCLIKDFE RRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVEDAEKYCLEDDLVNLEVLDEDTIIHQLQKRYAD LLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQHLTFLGKA NNQTLREKILQVNSLVEAFGNSCTAINDNSSRFGKYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSD FRLPEEKPPRYIADETGRVMHDITSKESYRRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKSEVPNAEALQN AASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSWIVNRINTLLQPDENICSAGGGMNVGILDIFGFENF QRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLRC KYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKA KVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILF EEFVKRYYYLAFTAHQTPLASKESCVAILEKSRLDHWVLGKTKVFLKYYHVEQLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREK GAIAIQSGDTSNQSSGPHSPVAAGTRGSAEVQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPAVTEKNGHSQAQSSPKGCDIF AGHANKHSVSGTDLLSSRICHPAPDQQGLSLWGAPQKPGSENGLAQKHRTPRRRCQQPKMLSSPEDTMYYNQLNGTLEYQGSKRKPRKLG -------------------------------------------------------------- |
Top |
Fusion Protein Functional Features |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr2:173292698/chr2:171191895) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ITGA6 | MYO3B |
FUNCTION: Integrin alpha-6/beta-1 (ITGA6:ITGB1) is a receptor for laminin on platelets (By similarity). Integrin alpha-6/beta-1 (ITGA6:ITGB1) is present in oocytes and is involved in sperm-egg fusion (By similarity). Integrin alpha-6/beta-4 (ITGA6:ITGB4) is a receptor for laminin in epithelial cells and it plays a critical structural role in the hemidesmosome (By similarity). ITGA6:ITGB4 binds to NRG1 (via EGF domain) and this binding is essential for NRG1-ERBB signaling (PubMed:20682778). ITGA6:ITGB4 binds to IGF1 and this binding is essential for IGF1 signaling (PubMed:22351760). ITGA6:ITGB4 binds to IGF2 and this binding is essential for IGF2 signaling (PubMed:28873464). {ECO:0000250|UniProtKB:Q61739, ECO:0000269|PubMed:20682778, ECO:0000269|PubMed:22351760, ECO:0000269|PubMed:28873464}. | FUNCTION: Probable actin-based motor with a protein kinase activity. Required for normal cochlear hair bundle development and hearing. Plays an important role in the early steps of cochlear hair bundle morphogenesis. Influences the number and lengths of stereocilia to be produced and limits the growth of microvilli within the forming auditory hair bundles thereby contributing to the architecture of the hair bundle, including its staircase pattern. Involved in the elongation of actin in stereocilia tips by transporting the actin regulatory factor ESPN to the plus ends of actin filaments. {ECO:0000250|UniProtKB:Q1EG27}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- Retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000334231 | 6 | 35 | 1060_1089 | 258.6666666666667 | 1351.0 | Domain | IQ 1 | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000334231 | 6 | 35 | 1087_1116 | 258.6666666666667 | 1351.0 | Domain | IQ 2 | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000334231 | 6 | 35 | 343_1058 | 258.6666666666667 | 1351.0 | Domain | Myosin motor | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000408978 | 6 | 35 | 1060_1089 | 249.66666666666666 | 1342.0 | Domain | IQ 1 | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000408978 | 6 | 35 | 1087_1116 | 249.66666666666666 | 1342.0 | Domain | IQ 2 | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000408978 | 6 | 35 | 343_1058 | 249.66666666666666 | 1342.0 | Domain | Myosin motor | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000409044 | 6 | 34 | 1060_1089 | 249.66666666666666 | 1315.0 | Domain | IQ 1 | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000409044 | 6 | 34 | 1087_1116 | 249.66666666666666 | 1315.0 | Domain | IQ 2 | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000409044 | 6 | 34 | 343_1058 | 249.66666666666666 | 1315.0 | Domain | Myosin motor | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000334231 | 6 | 35 | 939_961 | 258.6666666666667 | 1351.0 | Region | Actin-binding | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000408978 | 6 | 35 | 939_961 | 249.66666666666666 | 1342.0 | Region | Actin-binding | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000409044 | 6 | 34 | 939_961 | 249.66666666666666 | 1315.0 | Region | Actin-binding |
- Not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 363_371 | 60.666666666666664 | 1131.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 425_433 | 60.666666666666664 | 1131.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 480_488 | 60.666666666666664 | 1131.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 363_371 | 60.666666666666664 | 1648.6666666666667 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 425_433 | 60.666666666666664 | 1648.6666666666667 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 480_488 | 60.666666666666664 | 1648.6666666666667 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 363_371 | 60.666666666666664 | 1728.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 425_433 | 60.666666666666664 | 1728.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 480_488 | 60.666666666666664 | 1728.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 363_371 | 60.666666666666664 | 1772.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 425_433 | 60.666666666666664 | 1772.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 480_488 | 60.666666666666664 | 1772.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 363_371 | 60.666666666666664 | 1092.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 425_433 | 60.666666666666664 | 1092.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 480_488 | 60.666666666666664 | 1092.0 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 363_371 | 0 | 1085.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 425_433 | 0 | 1085.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 480_488 | 0 | 1085.3333333333333 | Calcium binding | Ontology_term=ECO:0000255 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 1079_1083 | 60.666666666666664 | 1131.0 | Motif | Note=GFFKR motif |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 1079_1083 | 60.666666666666664 | 1648.6666666666667 | Motif | Note=GFFKR motif |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 1079_1083 | 60.666666666666664 | 1728.3333333333333 | Motif | Note=GFFKR motif |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 1079_1083 | 60.666666666666664 | 1772.3333333333333 | Motif | Note=GFFKR motif |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 1079_1083 | 60.666666666666664 | 1092.0 | Motif | Note=GFFKR motif |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 1079_1083 | 0 | 1085.3333333333333 | Motif | Note=GFFKR motif |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 101_166 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 2 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 176_229 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 3 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 283_339 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 4 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 30_95 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 1 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 340_402 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 403_458 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 6 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 459_518 | 60.666666666666664 | 1131.0 | Repeat | FG-GAP 7 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 101_166 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 2 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 176_229 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 3 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 283_339 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 4 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 30_95 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 1 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 340_402 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 403_458 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 6 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 459_518 | 60.666666666666664 | 1648.6666666666667 | Repeat | FG-GAP 7 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 101_166 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 2 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 176_229 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 3 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 283_339 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 4 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 30_95 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 1 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 340_402 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 403_458 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 6 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 459_518 | 60.666666666666664 | 1728.3333333333333 | Repeat | FG-GAP 7 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 101_166 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 2 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 176_229 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 3 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 283_339 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 4 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 30_95 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 1 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 340_402 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 403_458 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 6 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 459_518 | 60.666666666666664 | 1772.3333333333333 | Repeat | FG-GAP 7 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 101_166 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 2 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 176_229 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 3 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 283_339 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 4 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 30_95 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 1 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 340_402 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 403_458 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 6 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 459_518 | 60.666666666666664 | 1092.0 | Repeat | FG-GAP 7 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 101_166 | 0 | 1085.3333333333333 | Repeat | FG-GAP 2 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 176_229 | 0 | 1085.3333333333333 | Repeat | FG-GAP 3 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 283_339 | 0 | 1085.3333333333333 | Repeat | FG-GAP 4 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 30_95 | 0 | 1085.3333333333333 | Repeat | FG-GAP 1 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 340_402 | 0 | 1085.3333333333333 | Repeat | FG-GAP 5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 403_458 | 0 | 1085.3333333333333 | Repeat | FG-GAP 6 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 459_518 | 0 | 1085.3333333333333 | Repeat | FG-GAP 7 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 1077_1130 | 60.666666666666664 | 1131.0 | Topological domain | Cytoplasmic |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 24_1050 | 60.666666666666664 | 1131.0 | Topological domain | Extracellular |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 1077_1130 | 60.666666666666664 | 1648.6666666666667 | Topological domain | Cytoplasmic |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 24_1050 | 60.666666666666664 | 1648.6666666666667 | Topological domain | Extracellular |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 1077_1130 | 60.666666666666664 | 1728.3333333333333 | Topological domain | Cytoplasmic |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 24_1050 | 60.666666666666664 | 1728.3333333333333 | Topological domain | Extracellular |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 1077_1130 | 60.666666666666664 | 1772.3333333333333 | Topological domain | Cytoplasmic |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 24_1050 | 60.666666666666664 | 1772.3333333333333 | Topological domain | Extracellular |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 1077_1130 | 60.666666666666664 | 1092.0 | Topological domain | Cytoplasmic |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 24_1050 | 60.666666666666664 | 1092.0 | Topological domain | Extracellular |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 1077_1130 | 0 | 1085.3333333333333 | Topological domain | Cytoplasmic |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 24_1050 | 0 | 1085.3333333333333 | Topological domain | Extracellular |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 1051_1076 | 60.666666666666664 | 1131.0 | Transmembrane | Helical |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 1051_1076 | 60.666666666666664 | 1648.6666666666667 | Transmembrane | Helical |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 1051_1076 | 60.666666666666664 | 1728.3333333333333 | Transmembrane | Helical |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 1051_1076 | 60.666666666666664 | 1772.3333333333333 | Transmembrane | Helical |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 1051_1076 | 60.666666666666664 | 1092.0 | Transmembrane | Helical |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 1051_1076 | 0 | 1085.3333333333333 | Transmembrane | Helical |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000334231 | 6 | 35 | 27_293 | 258.6666666666667 | 1351.0 | Domain | Protein kinase | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000408978 | 6 | 35 | 27_293 | 249.66666666666666 | 1342.0 | Domain | Protein kinase | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000409044 | 6 | 34 | 27_293 | 249.66666666666666 | 1315.0 | Domain | Protein kinase | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000334231 | 6 | 35 | 33_41 | 258.6666666666667 | 1351.0 | Nucleotide binding | ATP | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000408978 | 6 | 35 | 33_41 | 249.66666666666666 | 1342.0 | Nucleotide binding | ATP | |
Tgene | MYO3B | chr2:173292698 | chr2:171191895 | ENST00000409044 | 6 | 34 | 33_41 | 249.66666666666666 | 1315.0 | Nucleotide binding | ATP |
Top |
Fusion Protein-Protein Interaction |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
Gene | PPI interactors |
Protein-protein interactors based on sequence similarity (STRING) |
Gene | STRING network |
ITGA6 | |
MYO3B |
- Retained interactions in fusion protein (protein functional feature from UniProt). |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost interactions due to fusion (protein functional feature from UniProt). |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264106 | - | 1 | 26 | 1077_1083 | 60.666666666666664 | 1131.0 | HPS5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000264107 | - | 1 | 26 | 1077_1083 | 60.666666666666664 | 1648.6666666666667 | HPS5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000343713 | - | 1 | 26 | 1077_1083 | 60.666666666666664 | 1728.3333333333333 | HPS5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000375221 | - | 1 | 27 | 1077_1083 | 60.666666666666664 | 1772.3333333333333 | HPS5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409080 | - | 1 | 25 | 1077_1083 | 60.666666666666664 | 1092.0 | HPS5 |
Hgene | ITGA6 | chr2:173292698 | chr2:171191895 | ENST00000409532 | - | 1 | 26 | 1077_1083 | 0 | 1085.3333333333333 | HPS5 |
Top |
Related Drugs to ITGA6-MYO3B |
Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
Top |
Related Diseases to ITGA6-MYO3B |
Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |