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Fusion Protein:LDLRAD3-CD44 |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: LDLRAD3-CD44 | FusionPDB ID: 44360 | FusionGDB2.0 ID: 44360 | Hgene | Tgene | Gene symbol | LDLRAD3 | CD44 | Gene ID | 143458 | 960 |
| Gene name | low density lipoprotein receptor class A domain containing 3 | CD44 molecule (Indian blood group) | |
| Synonyms | LRAD3 | CDW44|CSPG8|ECMR-III|HCELL|HUTCH-I|IN|LHR|MC56|MDU2|MDU3|MIC4|Pgp1 | |
| Cytomap | 11p13 | 11p13 | |
| Type of gene | protein-coding | protein-coding | |
| Description | low-density lipoprotein receptor class A domain-containing protein 3LDLR class A domain-containing protein 3 | CD44 antigenGP90 lymphocyte homing/adhesion receptorHermes antigenIndian blood group antigencell surface glycoprotein CD44chondroitin sulfate proteoglycan 8epicanextracellular matrix receptor IIIhematopoietic cell E- and L-selectin ligandheparan | |
| Modification date | 20200313 | 20200329 | |
| UniProtAcc | Q86YD5 | P16070 | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000315571, ENST00000524419, ENST00000528989, ENST00000529759, | ENST00000528922, ENST00000526025, ENST00000263398, ENST00000278386, ENST00000352818, ENST00000360158, ENST00000415148, ENST00000428726, ENST00000433354, ENST00000433892, ENST00000434472, ENST00000437706, ENST00000449691, ENST00000526669, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 16 X 6 X 10=960 | 12 X 14 X 4=672 |
| # samples | 20 | 16 | |
| ** MAII score | log2(20/960*10)=-2.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/672*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: LDLRAD3 [Title/Abstract] AND CD44 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | LDLRAD3(35965694)-CD44(35198122), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | LDLRAD3-CD44 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. LDLRAD3-CD44 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. LDLRAD3-CD44 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. LDLRAD3-CD44 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. LDLRAD3-CD44 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. LDLRAD3-CD44 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | CD44 | GO:0007155 | cell adhesion | 19703720 |
| Tgene | CD44 | GO:0016477 | cell migration | 22726066 |
| Tgene | CD44 | GO:0030214 | hyaluronan catabolic process | 17170110 |
| Tgene | CD44 | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | 17045821 |
| Tgene | CD44 | GO:0042110 | T cell activation | 7528188 |
| Tgene | CD44 | GO:0043518 | negative regulation of DNA damage response, signal transduction by p53 class mediator | 17045821 |
| Tgene | CD44 | GO:0044344 | cellular response to fibroblast growth factor stimulus | 19577615 |
| Tgene | CD44 | GO:0050731 | positive regulation of peptidyl-tyrosine phosphorylation | 17045821 |
| Tgene | CD44 | GO:0070374 | positive regulation of ERK1 and ERK2 cascade | 17045821 |
| Tgene | CD44 | GO:1902166 | negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | 17045821 |
| Fusion gene breakpoints across LDLRAD3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across CD44 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | BRCA | TCGA-E9-A22G-01A | LDLRAD3 | chr11 | 35965694 | - | CD44 | chr11 | 35198122 | + |
| ChimerDB4 | BRCA | TCGA-E9-A22G-01A | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + |
| ChimerDB4 | BRCA | TCGA-E9-A22G | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + |
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Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000263398 | CD44 | chr11 | 35198121 | + | 4252 | 164 | 118 | 1182 | 354 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000449691 | CD44 | chr11 | 35198121 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000360158 | CD44 | chr11 | 35198121 | + | 1423 | 164 | 118 | 1287 | 389 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000415148 | CD44 | chr11 | 35198121 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000437706 | CD44 | chr11 | 35198121 | + | 2257 | 164 | 118 | 2121 | 667 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433354 | CD44 | chr11 | 35198121 | + | 2377 | 164 | 118 | 2241 | 707 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000428726 | CD44 | chr11 | 35198121 | + | 3020 | 164 | 118 | 2325 | 735 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000526669 | CD44 | chr11 | 35198121 | + | 845 | 164 | 118 | 717 | 199 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433892 | CD44 | chr11 | 35198121 | + | 2273 | 164 | 118 | 1578 | 486 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000278386 | CD44 | chr11 | 35198121 | + | 563 | 164 | 447 | 1 | 149 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000434472 | CD44 | chr11 | 35198121 | + | 1720 | 164 | 118 | 1386 | 422 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000352818 | CD44 | chr11 | 35198121 | + | 1120 | 164 | 118 | 1119 | 334 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000263398 | CD44 | chr11 | 35198121 | + | 4252 | 164 | 118 | 1182 | 354 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000449691 | CD44 | chr11 | 35198121 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000360158 | CD44 | chr11 | 35198121 | + | 1423 | 164 | 118 | 1287 | 389 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000415148 | CD44 | chr11 | 35198121 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000437706 | CD44 | chr11 | 35198121 | + | 2257 | 164 | 118 | 2121 | 667 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433354 | CD44 | chr11 | 35198121 | + | 2377 | 164 | 118 | 2241 | 707 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000428726 | CD44 | chr11 | 35198121 | + | 3020 | 164 | 118 | 2325 | 735 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000526669 | CD44 | chr11 | 35198121 | + | 845 | 164 | 118 | 717 | 199 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433892 | CD44 | chr11 | 35198121 | + | 2273 | 164 | 118 | 1578 | 486 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000278386 | CD44 | chr11 | 35198121 | + | 563 | 164 | 447 | 1 | 149 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000434472 | CD44 | chr11 | 35198121 | + | 1720 | 164 | 118 | 1386 | 422 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000352818 | CD44 | chr11 | 35198121 | + | 1120 | 164 | 118 | 1119 | 334 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000263398 | CD44 | chr11 | 35198121 | + | 4155 | 67 | 21 | 1085 | 354 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000449691 | CD44 | chr11 | 35198121 | + | 2235 | 67 | 21 | 2099 | 692 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000360158 | CD44 | chr11 | 35198121 | + | 1326 | 67 | 21 | 1190 | 389 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000415148 | CD44 | chr11 | 35198121 | + | 2235 | 67 | 21 | 2099 | 692 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000437706 | CD44 | chr11 | 35198121 | + | 2160 | 67 | 21 | 2024 | 667 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433354 | CD44 | chr11 | 35198121 | + | 2280 | 67 | 21 | 2144 | 707 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000428726 | CD44 | chr11 | 35198121 | + | 2923 | 67 | 21 | 2228 | 735 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000526669 | CD44 | chr11 | 35198121 | + | 748 | 67 | 21 | 620 | 199 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433892 | CD44 | chr11 | 35198121 | + | 2176 | 67 | 21 | 1481 | 486 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000278386 | CD44 | chr11 | 35198121 | + | 466 | 67 | 21 | 419 | 132 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000434472 | CD44 | chr11 | 35198121 | + | 1623 | 67 | 21 | 1289 | 422 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000352818 | CD44 | chr11 | 35198121 | + | 1023 | 67 | 21 | 1022 | 333 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000263398 | CD44 | chr11 | 35198122 | + | 4252 | 164 | 118 | 1182 | 354 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000449691 | CD44 | chr11 | 35198122 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000360158 | CD44 | chr11 | 35198122 | + | 1423 | 164 | 118 | 1287 | 389 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000415148 | CD44 | chr11 | 35198122 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000437706 | CD44 | chr11 | 35198122 | + | 2257 | 164 | 118 | 2121 | 667 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433354 | CD44 | chr11 | 35198122 | + | 2377 | 164 | 118 | 2241 | 707 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000428726 | CD44 | chr11 | 35198122 | + | 3020 | 164 | 118 | 2325 | 735 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000526669 | CD44 | chr11 | 35198122 | + | 845 | 164 | 118 | 717 | 199 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433892 | CD44 | chr11 | 35198122 | + | 2273 | 164 | 118 | 1578 | 486 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000278386 | CD44 | chr11 | 35198122 | + | 563 | 164 | 447 | 1 | 149 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000434472 | CD44 | chr11 | 35198122 | + | 1720 | 164 | 118 | 1386 | 422 |
| ENST00000524419 | LDLRAD3 | chr11 | 35965694 | + | ENST00000352818 | CD44 | chr11 | 35198122 | + | 1120 | 164 | 118 | 1119 | 334 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000263398 | CD44 | chr11 | 35198122 | + | 4252 | 164 | 118 | 1182 | 354 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000449691 | CD44 | chr11 | 35198122 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000360158 | CD44 | chr11 | 35198122 | + | 1423 | 164 | 118 | 1287 | 389 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000415148 | CD44 | chr11 | 35198122 | + | 2332 | 164 | 118 | 2196 | 692 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000437706 | CD44 | chr11 | 35198122 | + | 2257 | 164 | 118 | 2121 | 667 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433354 | CD44 | chr11 | 35198122 | + | 2377 | 164 | 118 | 2241 | 707 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000428726 | CD44 | chr11 | 35198122 | + | 3020 | 164 | 118 | 2325 | 735 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000526669 | CD44 | chr11 | 35198122 | + | 845 | 164 | 118 | 717 | 199 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433892 | CD44 | chr11 | 35198122 | + | 2273 | 164 | 118 | 1578 | 486 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000278386 | CD44 | chr11 | 35198122 | + | 563 | 164 | 447 | 1 | 149 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000434472 | CD44 | chr11 | 35198122 | + | 1720 | 164 | 118 | 1386 | 422 |
| ENST00000528989 | LDLRAD3 | chr11 | 35965694 | + | ENST00000352818 | CD44 | chr11 | 35198122 | + | 1120 | 164 | 118 | 1119 | 334 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000263398 | CD44 | chr11 | 35198122 | + | 4155 | 67 | 21 | 1085 | 354 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000449691 | CD44 | chr11 | 35198122 | + | 2235 | 67 | 21 | 2099 | 692 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000360158 | CD44 | chr11 | 35198122 | + | 1326 | 67 | 21 | 1190 | 389 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000415148 | CD44 | chr11 | 35198122 | + | 2235 | 67 | 21 | 2099 | 692 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000437706 | CD44 | chr11 | 35198122 | + | 2160 | 67 | 21 | 2024 | 667 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433354 | CD44 | chr11 | 35198122 | + | 2280 | 67 | 21 | 2144 | 707 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000428726 | CD44 | chr11 | 35198122 | + | 2923 | 67 | 21 | 2228 | 735 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000526669 | CD44 | chr11 | 35198122 | + | 748 | 67 | 21 | 620 | 199 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000433892 | CD44 | chr11 | 35198122 | + | 2176 | 67 | 21 | 1481 | 486 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000278386 | CD44 | chr11 | 35198122 | + | 466 | 67 | 21 | 419 | 132 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000434472 | CD44 | chr11 | 35198122 | + | 1623 | 67 | 21 | 1289 | 422 |
| ENST00000315571 | LDLRAD3 | chr11 | 35965694 | + | ENST00000352818 | CD44 | chr11 | 35198122 | + | 1023 | 67 | 21 | 1022 | 333 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000524419 | ENST00000263398 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 9.01E-05 | 0.9999099 |
| ENST00000524419 | ENST00000449691 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.011699398 | 0.9883007 |
| ENST00000524419 | ENST00000360158 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000584269 | 0.99941576 |
| ENST00000524419 | ENST00000415148 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.010683824 | 0.9893162 |
| ENST00000524419 | ENST00000437706 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.024196673 | 0.97580326 |
| ENST00000524419 | ENST00000433354 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.012531053 | 0.98746896 |
| ENST00000524419 | ENST00000428726 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.005326679 | 0.9946733 |
| ENST00000524419 | ENST00000526669 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.003143824 | 0.9968562 |
| ENST00000524419 | ENST00000433892 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000323284 | 0.9996767 |
| ENST00000524419 | ENST00000278386 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.02582328 | 0.97417665 |
| ENST00000524419 | ENST00000434472 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000446575 | 0.9995534 |
| ENST00000524419 | ENST00000352818 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000775495 | 0.99922454 |
| ENST00000528989 | ENST00000263398 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 9.01E-05 | 0.9999099 |
| ENST00000528989 | ENST00000449691 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.011699398 | 0.9883007 |
| ENST00000528989 | ENST00000360158 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000584269 | 0.99941576 |
| ENST00000528989 | ENST00000415148 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.010683824 | 0.9893162 |
| ENST00000528989 | ENST00000437706 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.024196673 | 0.97580326 |
| ENST00000528989 | ENST00000433354 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.012531053 | 0.98746896 |
| ENST00000528989 | ENST00000428726 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.005326679 | 0.9946733 |
| ENST00000528989 | ENST00000526669 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.003143824 | 0.9968562 |
| ENST00000528989 | ENST00000433892 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000323284 | 0.9996767 |
| ENST00000528989 | ENST00000278386 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.02582328 | 0.97417665 |
| ENST00000528989 | ENST00000434472 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000446575 | 0.9995534 |
| ENST00000528989 | ENST00000352818 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000775495 | 0.99922454 |
| ENST00000315571 | ENST00000263398 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 7.92E-05 | 0.9999207 |
| ENST00000315571 | ENST00000449691 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.011833049 | 0.988167 |
| ENST00000315571 | ENST00000360158 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000703114 | 0.9992969 |
| ENST00000315571 | ENST00000415148 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.01075975 | 0.9892402 |
| ENST00000315571 | ENST00000437706 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.025977813 | 0.97402215 |
| ENST00000315571 | ENST00000433354 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.012898004 | 0.987102 |
| ENST00000315571 | ENST00000428726 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.005053653 | 0.9949464 |
| ENST00000315571 | ENST00000526669 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.002941145 | 0.99705887 |
| ENST00000315571 | ENST00000433892 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000302146 | 0.9996979 |
| ENST00000315571 | ENST00000278386 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.041807774 | 0.9581922 |
| ENST00000315571 | ENST00000434472 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000499339 | 0.99950063 |
| ENST00000315571 | ENST00000352818 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198121 | + | 0.000724434 | 0.9992756 |
| ENST00000524419 | ENST00000263398 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 9.01E-05 | 0.9999099 |
| ENST00000524419 | ENST00000449691 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.011699398 | 0.9883007 |
| ENST00000524419 | ENST00000360158 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000584269 | 0.99941576 |
| ENST00000524419 | ENST00000415148 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.010683824 | 0.9893162 |
| ENST00000524419 | ENST00000437706 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.024196673 | 0.97580326 |
| ENST00000524419 | ENST00000433354 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.012531053 | 0.98746896 |
| ENST00000524419 | ENST00000428726 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.005326679 | 0.9946733 |
| ENST00000524419 | ENST00000526669 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.003143824 | 0.9968562 |
| ENST00000524419 | ENST00000433892 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000323284 | 0.9996767 |
| ENST00000524419 | ENST00000278386 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.02582328 | 0.97417665 |
| ENST00000524419 | ENST00000434472 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000446575 | 0.9995534 |
| ENST00000524419 | ENST00000352818 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000775495 | 0.99922454 |
| ENST00000528989 | ENST00000263398 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 9.01E-05 | 0.9999099 |
| ENST00000528989 | ENST00000449691 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.011699398 | 0.9883007 |
| ENST00000528989 | ENST00000360158 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000584269 | 0.99941576 |
| ENST00000528989 | ENST00000415148 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.010683824 | 0.9893162 |
| ENST00000528989 | ENST00000437706 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.024196673 | 0.97580326 |
| ENST00000528989 | ENST00000433354 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.012531053 | 0.98746896 |
| ENST00000528989 | ENST00000428726 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.005326679 | 0.9946733 |
| ENST00000528989 | ENST00000526669 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.003143824 | 0.9968562 |
| ENST00000528989 | ENST00000433892 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000323284 | 0.9996767 |
| ENST00000528989 | ENST00000278386 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.02582328 | 0.97417665 |
| ENST00000528989 | ENST00000434472 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000446575 | 0.9995534 |
| ENST00000528989 | ENST00000352818 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000775495 | 0.99922454 |
| ENST00000315571 | ENST00000263398 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 7.92E-05 | 0.9999207 |
| ENST00000315571 | ENST00000449691 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.011833049 | 0.988167 |
| ENST00000315571 | ENST00000360158 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000703114 | 0.9992969 |
| ENST00000315571 | ENST00000415148 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.01075975 | 0.9892402 |
| ENST00000315571 | ENST00000437706 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.025977813 | 0.97402215 |
| ENST00000315571 | ENST00000433354 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.012898004 | 0.987102 |
| ENST00000315571 | ENST00000428726 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.005053653 | 0.9949464 |
| ENST00000315571 | ENST00000526669 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.002941145 | 0.99705887 |
| ENST00000315571 | ENST00000433892 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000302146 | 0.9996979 |
| ENST00000315571 | ENST00000278386 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.041807774 | 0.9581922 |
| ENST00000315571 | ENST00000434472 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000499339 | 0.99950063 |
| ENST00000315571 | ENST00000352818 | LDLRAD3 | chr11 | 35965694 | + | CD44 | chr11 | 35198122 | + | 0.000724434 | 0.9992756 |
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Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >44360_44360_1_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000263398_length(amino acids)=354AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLL -------------------------------------------------------------- >44360_44360_2_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000278386_length(amino acids)=132AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCSLHCSQQSKKVWAEEKASDQ -------------------------------------------------------------- >44360_44360_3_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000352818_length(amino acids)=333AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQK -------------------------------------------------------------- >44360_44360_4_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000360158_length(amino acids)=389AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRRDQDTFHPSGGSHTTHGSES DGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLV -------------------------------------------------------------- >44360_44360_5_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000415148_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQ NQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHE GYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_6_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000428726_length(amino acids)=735AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDP NHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANT TSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTA -------------------------------------------------------------- >44360_44360_7_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000433354_length(amino acids)=707AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTADVDRNGTTAYEGNWNPEAHPP LIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNP ISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIP VTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILA -------------------------------------------------------------- >44360_44360_8_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000433892_length(amino acids)=486AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDH PTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSH TTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKS -------------------------------------------------------------- >44360_44360_9_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000434472_length(amino acids)=422AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_10_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000437706_length(amino acids)=667AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSRDQDTFHPSGGS HTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASK -------------------------------------------------------------- >44360_44360_11_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000449691_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTTASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_12_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198121_ENST00000526669_length(amino acids)=199AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC GANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQ -------------------------------------------------------------- >44360_44360_13_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000263398_length(amino acids)=354AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLL -------------------------------------------------------------- >44360_44360_14_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000278386_length(amino acids)=132AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCSLHCSQQSKKVWAEEKASDQ -------------------------------------------------------------- >44360_44360_15_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000352818_length(amino acids)=333AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQK -------------------------------------------------------------- >44360_44360_16_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000360158_length(amino acids)=389AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRRDQDTFHPSGGSHTTHGSES DGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLV -------------------------------------------------------------- >44360_44360_17_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000415148_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQ NQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHE GYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_18_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000428726_length(amino acids)=735AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDP NHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANT TSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTA -------------------------------------------------------------- >44360_44360_19_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000433354_length(amino acids)=707AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTADVDRNGTTAYEGNWNPEAHPP LIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNP ISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIP VTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILA -------------------------------------------------------------- >44360_44360_20_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000433892_length(amino acids)=486AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDH PTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSH TTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKS -------------------------------------------------------------- >44360_44360_21_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000434472_length(amino acids)=422AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_22_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000437706_length(amino acids)=667AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSRDQDTFHPSGGS HTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASK -------------------------------------------------------------- >44360_44360_23_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000449691_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTTASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_24_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000315571_CD44_chr11_35198122_ENST00000526669_length(amino acids)=199AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC GANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQ -------------------------------------------------------------- >44360_44360_25_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000263398_length(amino acids)=354AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLL -------------------------------------------------------------- >44360_44360_26_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000278386_length(amino acids)=149AA_BP=1 MLASPLSPLGFLSSTAPLPLLITSFFFCPHLLRLLTAMQTAGLKSDAQSFLHLGHCGQGAIESLAEVSGLRPRDAVATIFLHVEYTCKAA -------------------------------------------------------------- >44360_44360_27_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000352818_length(amino acids)=334AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQK -------------------------------------------------------------- >44360_44360_28_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000360158_length(amino acids)=389AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRRDQDTFHPSGGSHTTHGSES DGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLV -------------------------------------------------------------- >44360_44360_29_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000415148_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQ NQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHE GYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_30_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000428726_length(amino acids)=735AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDP NHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANT TSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTA -------------------------------------------------------------- >44360_44360_31_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000433354_length(amino acids)=707AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTADVDRNGTTAYEGNWNPEAHPP LIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNP ISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIP VTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILA -------------------------------------------------------------- >44360_44360_32_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000433892_length(amino acids)=486AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDH PTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSH TTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKS -------------------------------------------------------------- >44360_44360_33_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000434472_length(amino acids)=422AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_34_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000437706_length(amino acids)=667AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSRDQDTFHPSGGS HTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASK -------------------------------------------------------------- >44360_44360_35_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000449691_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTTASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_36_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198121_ENST00000526669_length(amino acids)=199AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC GANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQ -------------------------------------------------------------- >44360_44360_37_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000263398_length(amino acids)=354AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLL -------------------------------------------------------------- >44360_44360_38_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000278386_length(amino acids)=149AA_BP=1 MLASPLSPLGFLSSTAPLPLLITSFFFCPHLLRLLTAMQTAGLKSDAQSFLHLGHCGQGAIESLAEVSGLRPRDAVATIFLHVEYTCKAA -------------------------------------------------------------- >44360_44360_39_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000352818_length(amino acids)=334AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQK -------------------------------------------------------------- >44360_44360_40_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000360158_length(amino acids)=389AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRRDQDTFHPSGGSHTTHGSES DGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLV -------------------------------------------------------------- >44360_44360_41_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000415148_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQ NQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHE GYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_42_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000428726_length(amino acids)=735AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDP NHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANT TSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTA -------------------------------------------------------------- >44360_44360_43_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000433354_length(amino acids)=707AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTADVDRNGTTAYEGNWNPEAHPP LIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNP ISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIP VTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILA -------------------------------------------------------------- >44360_44360_44_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000433892_length(amino acids)=486AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDH PTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSH TTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKS -------------------------------------------------------------- >44360_44360_45_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000434472_length(amino acids)=422AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_46_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000437706_length(amino acids)=667AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSRDQDTFHPSGGS HTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASK -------------------------------------------------------------- >44360_44360_47_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000449691_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTTASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_48_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000524419_CD44_chr11_35198122_ENST00000526669_length(amino acids)=199AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC GANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQ -------------------------------------------------------------- >44360_44360_49_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000263398_length(amino acids)=354AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLL -------------------------------------------------------------- >44360_44360_50_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000278386_length(amino acids)=149AA_BP=1 MLASPLSPLGFLSSTAPLPLLITSFFFCPHLLRLLTAMQTAGLKSDAQSFLHLGHCGQGAIESLAEVSGLRPRDAVATIFLHVEYTCKAA -------------------------------------------------------------- >44360_44360_51_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000352818_length(amino acids)=334AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQK -------------------------------------------------------------- >44360_44360_52_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000360158_length(amino acids)=389AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRRDQDTFHPSGGSHTTHGSES DGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLV -------------------------------------------------------------- >44360_44360_53_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000415148_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQ NQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHE GYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_54_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000428726_length(amino acids)=735AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDP NHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANT TSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTA -------------------------------------------------------------- >44360_44360_55_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000433354_length(amino acids)=707AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTADVDRNGTTAYEGNWNPEAHPP LIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNP ISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIP VTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILA -------------------------------------------------------------- >44360_44360_56_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000433892_length(amino acids)=486AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDH PTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSH TTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKS -------------------------------------------------------------- >44360_44360_57_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000434472_length(amino acids)=422AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_58_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000437706_length(amino acids)=667AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSRDQDTFHPSGGS HTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASK -------------------------------------------------------------- >44360_44360_59_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000449691_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTTASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_60_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198121_ENST00000526669_length(amino acids)=199AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC GANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQ -------------------------------------------------------------- >44360_44360_61_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000263398_length(amino acids)=354AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLL -------------------------------------------------------------- >44360_44360_62_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000278386_length(amino acids)=149AA_BP=1 MLASPLSPLGFLSSTAPLPLLITSFFFCPHLLRLLTAMQTAGLKSDAQSFLHLGHCGQGAIESLAEVSGLRPRDAVATIFLHVEYTCKAA -------------------------------------------------------------- >44360_44360_63_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000352818_length(amino acids)=334AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATRHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQK -------------------------------------------------------------- >44360_44360_64_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000360158_length(amino acids)=389AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRRDQDTFHPSGGSHTTHGSES DGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLV -------------------------------------------------------------- >44360_44360_65_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000415148_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATSTSSNTISAGWEPNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQ NQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPLIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHE GYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_66_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000428726_length(amino acids)=735AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDP NHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANT TSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQFMTA -------------------------------------------------------------- >44360_44360_67_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000433354_length(amino acids)=707AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTADVDRNGTTAYEGNWNPEAHPP LIHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNP ISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTRNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIP VTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILA -------------------------------------------------------------- >44360_44360_68_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000433892_length(amino acids)=486AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDH PTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVTVGDSNSNVNRSLSGDQDTFHPSGGSH TTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKS -------------------------------------------------------------- >44360_44360_69_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000434472_length(amino acids)=422AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_70_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000437706_length(amino acids)=667AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTIQATPSSTTEETATQKEQWFGNRWHEGYRQTPKEDSHSTTGTAAASAHTSHPMQGRTTPSPEDSSWTDFFNPI SHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGPLSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSRDQDTFHPSGGS HTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASK -------------------------------------------------------------- >44360_44360_71_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000449691_length(amino acids)=692AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC AANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDVSSGSSSERS STSGGYIFYTFSTVHPIPDEDSPWITDSTDRIPATTLMSTSATATETATKRQETWDWFSWLFLPSESKNHLHTTTQMAGTSSNTISAGWE PNEENEDERDRHLSFSGSGIDDDEDFISSTISTTPRAFDHTKQNQDWTQWNPSHSNPEVLLQTTTRMTDVDRNGTTAYEGNWNPEAHPPL IHHEHHEEEETPHSTSTTASAHTSHPMQGRTTPSPEDSSWTDFFNPISHPMGRGHQAGRRMDMDSSHSITLQPTANPNTGLVEDLDRTGP LSMTTQQSNSQSFSTSHEGLEEDKDHPTTSTLTSSNRNDVTGGRRDPNHSEGSTTLLEGYTSHYPHTKESRTFIPVTSAKTGSFGVTAVT VGDSNSNVNRSLSGDQDTFHPSGGSHTTHGSESDGHSHGSQEGGANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKK -------------------------------------------------------------- >44360_44360_72_LDLRAD3-CD44_LDLRAD3_chr11_35965694_ENST00000528989_CD44_chr11_35198122_ENST00000526669_length(amino acids)=199AA_BP=8 MWLLGPLCLLLSSAADLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSIC GANTTSGPIRTPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINSGNGAVEDRKPSGLNGEASKSQEMVHLVNKESSETPDQ -------------------------------------------------------------- |
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Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr11:35965694/chr11:35198122) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| LDLRAD3 | CD44 |
| FUNCTION: May influence APP processing, resulting in a decrease in sAPP-alpha production and increased amyloidogenic P3 peptide production. {ECO:0000250}. | FUNCTION: Cell-surface receptor that plays a role in cell-cell interactions, cell adhesion and migration, helping them to sense and respond to changes in the tissue microenvironment (PubMed:16541107, PubMed:19703720, PubMed:22726066). Participates thereby in a wide variety of cellular functions including the activation, recirculation and homing of T-lymphocytes, hematopoiesis, inflammation and response to bacterial infection (PubMed:7528188). Engages, through its ectodomain, extracellular matrix components such as hyaluronan/HA, collagen, growth factors, cytokines or proteases and serves as a platform for signal transduction by assembling, via its cytoplasmic domain, protein complexes containing receptor kinases and membrane proteases (PubMed:18757307, PubMed:23589287). Such effectors include PKN2, the RhoGTPases RAC1 and RHOA, Rho-kinases and phospholipase C that coordinate signaling pathways promoting calcium mobilization and actin-mediated cytoskeleton reorganization essential for cell migration and adhesion (PubMed:15123640). {ECO:0000269|PubMed:15123640, ECO:0000269|PubMed:16541107, ECO:0000269|PubMed:18757307, ECO:0000269|PubMed:19703720, ECO:0000269|PubMed:22726066, ECO:0000269|PubMed:23589287, ECO:0000269|PubMed:7528188}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000263398 | 0 | 9 | 150_158 | 22.333333333333332 | 362.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000278386 | 0 | 4 | 150_158 | 22.333333333333332 | 140.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000352818 | 0 | 8 | 150_158 | 22.333333333333332 | 341.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000360158 | 0 | 10 | 150_158 | 22.333333333333332 | 397.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000415148 | 0 | 17 | 150_158 | 22.333333333333332 | 700.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000428726 | 0 | 18 | 150_158 | 22.333333333333332 | 743.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000433892 | 0 | 12 | 150_158 | 22.333333333333332 | 494.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000434472 | 0 | 10 | 150_158 | 22.333333333333332 | 430.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000437706 | 0 | 17 | 150_158 | 22.333333333333332 | 675.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000449691 | 0 | 17 | 150_158 | 22.333333333333332 | 700.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000263398 | 0 | 9 | 150_158 | 22.333333333333332 | 362.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000278386 | 0 | 4 | 150_158 | 22.333333333333332 | 140.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000352818 | 0 | 8 | 150_158 | 22.333333333333332 | 341.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000360158 | 0 | 10 | 150_158 | 22.333333333333332 | 397.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000415148 | 0 | 17 | 150_158 | 22.333333333333332 | 700.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000428726 | 0 | 18 | 150_158 | 22.333333333333332 | 743.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000433892 | 0 | 12 | 150_158 | 22.333333333333332 | 494.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000434472 | 0 | 10 | 150_158 | 22.333333333333332 | 430.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000437706 | 0 | 17 | 150_158 | 22.333333333333332 | 675.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000449691 | 0 | 17 | 150_158 | 22.333333333333332 | 700.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000263398 | 0 | 9 | 32_120 | 22.333333333333332 | 362.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000278386 | 0 | 4 | 32_120 | 22.333333333333332 | 140.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000352818 | 0 | 8 | 32_120 | 22.333333333333332 | 341.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000360158 | 0 | 10 | 32_120 | 22.333333333333332 | 397.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000415148 | 0 | 17 | 32_120 | 22.333333333333332 | 700.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000428726 | 0 | 18 | 32_120 | 22.333333333333332 | 743.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000433892 | 0 | 12 | 32_120 | 22.333333333333332 | 494.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000434472 | 0 | 10 | 32_120 | 22.333333333333332 | 430.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000437706 | 0 | 17 | 32_120 | 22.333333333333332 | 675.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000449691 | 0 | 17 | 32_120 | 22.333333333333332 | 700.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000263398 | 0 | 9 | 32_120 | 22.333333333333332 | 362.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000278386 | 0 | 4 | 32_120 | 22.333333333333332 | 140.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000352818 | 0 | 8 | 32_120 | 22.333333333333332 | 341.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000360158 | 0 | 10 | 32_120 | 22.333333333333332 | 397.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000415148 | 0 | 17 | 32_120 | 22.333333333333332 | 700.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000428726 | 0 | 18 | 32_120 | 22.333333333333332 | 743.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000433892 | 0 | 12 | 32_120 | 22.333333333333332 | 494.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000434472 | 0 | 10 | 32_120 | 22.333333333333332 | 430.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000437706 | 0 | 17 | 32_120 | 22.333333333333332 | 675.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000449691 | 0 | 17 | 32_120 | 22.333333333333332 | 700.0 | Domain | Link | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000263398 | 0 | 9 | 224_649 | 22.333333333333332 | 362.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000278386 | 0 | 4 | 224_649 | 22.333333333333332 | 140.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000352818 | 0 | 8 | 224_649 | 22.333333333333332 | 341.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000360158 | 0 | 10 | 224_649 | 22.333333333333332 | 397.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000415148 | 0 | 17 | 224_649 | 22.333333333333332 | 700.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000428726 | 0 | 18 | 224_649 | 22.333333333333332 | 743.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000433892 | 0 | 12 | 224_649 | 22.333333333333332 | 494.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000434472 | 0 | 10 | 224_649 | 22.333333333333332 | 430.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000437706 | 0 | 17 | 224_649 | 22.333333333333332 | 675.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000449691 | 0 | 17 | 224_649 | 22.333333333333332 | 700.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000263398 | 0 | 9 | 224_649 | 22.333333333333332 | 362.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000278386 | 0 | 4 | 224_649 | 22.333333333333332 | 140.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000352818 | 0 | 8 | 224_649 | 22.333333333333332 | 341.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000360158 | 0 | 10 | 224_649 | 22.333333333333332 | 397.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000415148 | 0 | 17 | 224_649 | 22.333333333333332 | 700.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000428726 | 0 | 18 | 224_649 | 22.333333333333332 | 743.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000433892 | 0 | 12 | 224_649 | 22.333333333333332 | 494.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000434472 | 0 | 10 | 224_649 | 22.333333333333332 | 430.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000437706 | 0 | 17 | 224_649 | 22.333333333333332 | 675.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000449691 | 0 | 17 | 224_649 | 22.333333333333332 | 700.0 | Region | Note=Stem | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000263398 | 0 | 9 | 21_649 | 22.333333333333332 | 362.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000263398 | 0 | 9 | 671_742 | 22.333333333333332 | 362.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000278386 | 0 | 4 | 21_649 | 22.333333333333332 | 140.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000278386 | 0 | 4 | 671_742 | 22.333333333333332 | 140.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000352818 | 0 | 8 | 21_649 | 22.333333333333332 | 341.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000352818 | 0 | 8 | 671_742 | 22.333333333333332 | 341.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000360158 | 0 | 10 | 21_649 | 22.333333333333332 | 397.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000360158 | 0 | 10 | 671_742 | 22.333333333333332 | 397.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000415148 | 0 | 17 | 21_649 | 22.333333333333332 | 700.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000415148 | 0 | 17 | 671_742 | 22.333333333333332 | 700.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000428726 | 0 | 18 | 21_649 | 22.333333333333332 | 743.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000428726 | 0 | 18 | 671_742 | 22.333333333333332 | 743.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000433892 | 0 | 12 | 21_649 | 22.333333333333332 | 494.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000433892 | 0 | 12 | 671_742 | 22.333333333333332 | 494.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000434472 | 0 | 10 | 21_649 | 22.333333333333332 | 430.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000434472 | 0 | 10 | 671_742 | 22.333333333333332 | 430.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000437706 | 0 | 17 | 21_649 | 22.333333333333332 | 675.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000437706 | 0 | 17 | 671_742 | 22.333333333333332 | 675.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000449691 | 0 | 17 | 21_649 | 22.333333333333332 | 700.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000449691 | 0 | 17 | 671_742 | 22.333333333333332 | 700.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000263398 | 0 | 9 | 21_649 | 22.333333333333332 | 362.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000263398 | 0 | 9 | 671_742 | 22.333333333333332 | 362.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000278386 | 0 | 4 | 21_649 | 22.333333333333332 | 140.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000278386 | 0 | 4 | 671_742 | 22.333333333333332 | 140.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000352818 | 0 | 8 | 21_649 | 22.333333333333332 | 341.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000352818 | 0 | 8 | 671_742 | 22.333333333333332 | 341.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000360158 | 0 | 10 | 21_649 | 22.333333333333332 | 397.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000360158 | 0 | 10 | 671_742 | 22.333333333333332 | 397.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000415148 | 0 | 17 | 21_649 | 22.333333333333332 | 700.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000415148 | 0 | 17 | 671_742 | 22.333333333333332 | 700.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000428726 | 0 | 18 | 21_649 | 22.333333333333332 | 743.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000428726 | 0 | 18 | 671_742 | 22.333333333333332 | 743.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000433892 | 0 | 12 | 21_649 | 22.333333333333332 | 494.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000433892 | 0 | 12 | 671_742 | 22.333333333333332 | 494.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000434472 | 0 | 10 | 21_649 | 22.333333333333332 | 430.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000434472 | 0 | 10 | 671_742 | 22.333333333333332 | 430.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000437706 | 0 | 17 | 21_649 | 22.333333333333332 | 675.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000437706 | 0 | 17 | 671_742 | 22.333333333333332 | 675.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000449691 | 0 | 17 | 21_649 | 22.333333333333332 | 700.0 | Topological domain | Extracellular | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000449691 | 0 | 17 | 671_742 | 22.333333333333332 | 700.0 | Topological domain | Cytoplasmic | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000263398 | 0 | 9 | 650_670 | 22.333333333333332 | 362.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000278386 | 0 | 4 | 650_670 | 22.333333333333332 | 140.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000352818 | 0 | 8 | 650_670 | 22.333333333333332 | 341.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000360158 | 0 | 10 | 650_670 | 22.333333333333332 | 397.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000415148 | 0 | 17 | 650_670 | 22.333333333333332 | 700.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000428726 | 0 | 18 | 650_670 | 22.333333333333332 | 743.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000433892 | 0 | 12 | 650_670 | 22.333333333333332 | 494.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000434472 | 0 | 10 | 650_670 | 22.333333333333332 | 430.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000437706 | 0 | 17 | 650_670 | 22.333333333333332 | 675.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198121 | ENST00000449691 | 0 | 17 | 650_670 | 22.333333333333332 | 700.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000263398 | 0 | 9 | 650_670 | 22.333333333333332 | 362.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000278386 | 0 | 4 | 650_670 | 22.333333333333332 | 140.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000352818 | 0 | 8 | 650_670 | 22.333333333333332 | 341.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000360158 | 0 | 10 | 650_670 | 22.333333333333332 | 397.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000415148 | 0 | 17 | 650_670 | 22.333333333333332 | 700.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000428726 | 0 | 18 | 650_670 | 22.333333333333332 | 743.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000433892 | 0 | 12 | 650_670 | 22.333333333333332 | 494.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000434472 | 0 | 10 | 650_670 | 22.333333333333332 | 430.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000437706 | 0 | 17 | 650_670 | 22.333333333333332 | 675.0 | Transmembrane | Helical | |
| Tgene | CD44 | chr11:35965694 | chr11:35198122 | ENST00000449691 | 0 | 17 | 650_670 | 22.333333333333332 | 700.0 | Transmembrane | Helical |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 274_277 | 15.333333333333334 | 346.0 | Compositional bias | Note=Poly-Pro |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 274_277 | 15.333333333333334 | 346.0 | Compositional bias | Note=Poly-Pro |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 112_148 | 15.333333333333334 | 346.0 | Domain | LDL-receptor class A 3 |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 28_65 | 15.333333333333334 | 346.0 | Domain | LDL-receptor class A 1 |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 70_107 | 15.333333333333334 | 346.0 | Domain | LDL-receptor class A 2 |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 112_148 | 15.333333333333334 | 346.0 | Domain | LDL-receptor class A 3 |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 28_65 | 15.333333333333334 | 346.0 | Domain | LDL-receptor class A 1 |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 70_107 | 15.333333333333334 | 346.0 | Domain | LDL-receptor class A 2 |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 18_173 | 15.333333333333334 | 346.0 | Topological domain | Extracellular |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 195_345 | 15.333333333333334 | 346.0 | Topological domain | Cytoplasmic |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 18_173 | 15.333333333333334 | 346.0 | Topological domain | Extracellular |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 195_345 | 15.333333333333334 | 346.0 | Topological domain | Cytoplasmic |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198121 | ENST00000315571 | + | 1 | 6 | 174_194 | 15.333333333333334 | 346.0 | Transmembrane | Helical |
| Hgene | LDLRAD3 | chr11:35965694 | chr11:35198122 | ENST00000315571 | + | 1 | 6 | 174_194 | 15.333333333333334 | 346.0 | Transmembrane | Helical |
Top |
Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| LDLRAD3 | |
| CD44 |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs to LDLRAD3-CD44 |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
Top |
Related Diseases to LDLRAD3-CD44 |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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