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Fusion Protein:MACF1-LSAMP |
Fusion Protein Summary |
Fusion gene summary |
Fusion partner gene information | Fusion gene name: MACF1-LSAMP | FusionPDB ID: 50610 | FusionGDB2.0 ID: 50610 | Hgene | Tgene | Gene symbol | MACF1 | LSAMP | Gene ID | 23499 | 4045 |
Gene name | microtubule actin crosslinking factor 1 | limbic system associated membrane protein | |
Synonyms | ABP620|ACF7|LIS9|MACF|OFC4 | IGLON3|LAMP | |
Cytomap | 1p34.3 | 3q13.31 | |
Type of gene | protein-coding | protein-coding | |
Description | microtubule-actin cross-linking factor 1620 kDa actin binding proteinactin cross-linking family protein 7macrophin 1 isoformtrabeculin-alpha | limbic system-associated membrane proteinIgLON family member 3 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q9UPN3 | Q13449 | |
Ensembl transtripts involved in fusion gene | ENST ids | ENST00000289893, ENST00000317713, ENST00000361689, ENST00000372915, ENST00000539005, ENST00000545844, ENST00000564288, ENST00000567887, ENST00000476350, ENST00000484793, ENST00000536367, ENST00000602421, | ENST00000498645, ENST00000539563, ENST00000490035, |
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 46 X 37 X 13=22126 | 20 X 18 X 11=3960 |
# samples | 44 | 34 | |
** MAII score | log2(44/22126*10)=-5.65209532630239 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(34/3960*10)=-3.54189377882927 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context (manual curation of fusion genes in FusionPDB) | PubMed: MACF1 [Title/Abstract] AND LSAMP [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | MACF1(39847824)-LSAMP(116163802), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | MACF1-LSAMP seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. MACF1-LSAMP seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. MACF1-LSAMP seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. MACF1-LSAMP seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. MACF1-LSAMP seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. MACF1-LSAMP seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | MACF1 | GO:0030334 | regulation of cell migration | 27693509 |
Hgene | MACF1 | GO:0043001 | Golgi to plasma membrane protein transport | 15265687 |
Hgene | MACF1 | GO:0045773 | positive regulation of axon extension | 22705394 |
Hgene | MACF1 | GO:0051893 | regulation of focal adhesion assembly | 27693509 |
Fusion gene breakpoints across MACF1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across LSAMP (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
Fusion gene information from FusionGDB2.0. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-29-1778-01A | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - |
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Fusion ORF Analysis |
Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000545844 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 16640 | 7770 | 108 | 7784 | 2558 |
ENST00000567887 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 22986 | 14116 | 34 | 14130 | 4698 |
ENST00000372915 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 22820 | 13950 | 6 | 13964 | 4652 |
ENST00000361689 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 16584 | 7714 | 52 | 7728 | 2558 |
ENST00000539005 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 16521 | 7651 | 52 | 7665 | 2537 |
ENST00000317713 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 16584 | 7714 | 52 | 7728 | 2558 |
ENST00000564288 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 23495 | 14625 | 771 | 14639 | 4622 |
ENST00000289893 | MACF1 | chr1 | 39847824 | + | ENST00000490035 | LSAMP | chr3 | 116163802 | - | 18169 | 9299 | 131 | 9313 | 3060 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000545844 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.000761145 | 0.99923885 |
ENST00000567887 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.001018146 | 0.9989818 |
ENST00000372915 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.000925211 | 0.9990748 |
ENST00000361689 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.000708944 | 0.99929106 |
ENST00000539005 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.000443853 | 0.9995561 |
ENST00000317713 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.000708944 | 0.99929106 |
ENST00000564288 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.002034765 | 0.9979652 |
ENST00000289893 | ENST00000490035 | MACF1 | chr1 | 39847824 | + | LSAMP | chr3 | 116163802 | - | 0.000667138 | 0.99933285 |
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Fusion Amino Acid Sequences |
For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >50610_50610_1_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000289893_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=3060AA_BP= MQKGLLDQDTGLVLLESQVIMSGLIAPETGENLSLEEGIARNLINPQMYQQLRELQDALALISRLTESRGPLSVVEAIEKRIISETVGLK ILEAHLATGGFSLSPSENCINLEEAFHQGLISAWLHSVLESYLRTSKNLIDPNTAEKIGLLDLMQRCIVHQESGFKLLPVKQLAGGMVSL KSGRKVSIFRAVQEGLIDRQVTVRLLEAQLFAGGIVDPRTGHRLTVEEAVRHNLIDQDMACAILIRQLQTGGIIDTVTGQRLTIDEAVSN DLVAAKIALVILESLWSFMGLLWPESGEILPITDALEQGIVSTELAHKILSNRQHIKALFLPATTEILSWKKAIESGILDRDLANNLKSI CIPDVMPHMQLADSAEQNINPGAAVLPCSKSHPKATASQSENLLFQLMTHSYINVQNGQRLLLLDKELMETLTSRDEYQTSPPKVVEIGH QRQKTPEGLQESANVKISGTFSSGWTVRLPEFQFSSQNKEYPDREDCTTEKGKKTTVETEDSSVENPEQDLFVEQKERNPNIDALKVINK VKLEVQRQLIGTQREDQTAVSVRENASRGHLLTIPPAEAEGVPLVVDKDVFSVETPKKEHQPLRNTSFTCQNEQAHTLETEYIHDETGGS HIKPQSKKLQVQVKKTLGIKLELKSETDGNVHPLDKKEMLKKTFLAKDDHKESQEAQNIAGGSMMMSEKTDEEDSGREIFLSCSHPLELL EEATLNVLSAQLLDGGIFHEQTGQKLLLNEAISRGIVPSHTAVKLMEKLNMFQGFFDSQTCESLTTEEVINEGLMDEKLLHNVLMADKAI SGVLDPRTQTLCSVKDAVTVGLLDKETATRILERQVVTGGIIDLKRGKKVSVTLASTLGLVDVADQPELINLEKASKGRDAEKTVRERLI SLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHISGMRLSVDNAFRHGLIGEDLAEKLKRVENLNIHQIFNPE TKENISLPKAIKLDLITSDLKREIQEVQAFTGNFVDLISGQRLTLAEAKKEGLLTNEAVLSPGMMHGIVDPENCRIVPYSELVKKCKIDI ESGQRYLEVIPFSDIKDGVSDKVLTLSQAIQLGKVDFASTLKVLEAQANTGGIIDTATGKRLTLASALEEKLVDENMVRIIASHQVLNGG IVDIFSDQRVTLVEAIEKRLISPELANMIQIDSSEFSDHRAQIEKQEGIEVCALQNEFLGKDMLIACNQTAEMSCNKVEESERLFQVENQ SAQEKVKVRVSDGEQAKKSREISLKEFGCKDQRKPRMSSDAKEFISIINPHNLKGKSLGQVSLTHPYSECDFKLKEVARNNMGNDTNEEQ EKAVTKIEIISHMKQSTSCLDSEEIRENQGEVILEVQETYCETSGKLPSEQVLQQPMNARVKSKREKREVIVEESIRTCKPAFLSEEKLY QETAIRDEHDSHIKSQPREMTSSEKGKEADTEMGFSITFKIEESSSQVVPQGISVKHLDALTLFSSKQANEGKVNNLSLCLTLKPEENLS REIACGAQSEPFPCMTPRPEGLHYQESDGKAQVTGPSQISKTDKSFQGTTRQETNYQDSWVTSKTKETKHQISSSNECKEKSYQEVSFDP ARGLKLEEITVSRPDSKEVRYLEFSDRKDLHHQGSKSDDKLCGTLKSEIATQELTGEKFLEMANPNVAGLEAGSIEDIVTQRGSRVLGSF LPEKLFKGVSQKENTGQQNAIISPTVLETSEEKTVSLTVCSAVKTEKTPQEKLRESPGSEQTPFMTAPEGKGNGGVNPEPFRATQNVFTR QLCLEHDEKLVSYLSLLRNIEMRTKQIQPLELNLAELQDLLCQAKVLERELKDLTTLVSQELECVNQIIISQPQEVPAQLLKALEKDAKN LQKSLSSVSDTWNSRLLHFQNAVEIEKTKVLNQHTQLEGRLQDLRAWVGNKNLILNSKGSNSEIDVDSLNLCLQQYEDLKQPMAERKAQL DALAFDIQFFISEHAQDLSPQQNRQMLRLLNELQRSFQDILEQTAAQVDALQGHLQQMEQEALVKTLQKQQNTCHQQLEDLCSWVGQAER ALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEENQTKLSPRELTALREKLHQAKEQYEALQEETRVAQKELE EAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGMEQLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMKAR HQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKEL ENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFKEGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLN MLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVEKLQKVARDIMEIEGEPAPDHRHVQET TDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEGKQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREM VTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFEHLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELN LEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKEREKDASSCQEQLDEFRKLVRTFQKWLKETEGSIPPTET SMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQGKTGSILPSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLK YEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSPTKTETVKAQAESNKAFLAELEQNSPKIQKVKEALAGLL VTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAESQLRPWLMEKELMMGVLGPLSIDPNMLNAQKQQVQDLGR -------------------------------------------------------------- >50610_50610_2_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000317713_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=2558AA_BP= MSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPLHEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVNK HLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF QISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRL LDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFK ETEILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGALNCEEKLTLA KNTLQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPP STLTTTHLKAEPLTKATHSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLPSVELQLETQQHIHTSVE ELGSSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRN YFSELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFLRNLQDSIK RKYSCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQR TKWKVISPTGNEAMVPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSAPGECHQIM KNLQAHYEDFLQDSRDSVLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISELKNIRLRLEEYEQRVVKRIQSLASSRTD RDAWQDNALRIAEQEHTQEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMDHVYGLSTVYLNKLKTVDVIVRSIQDAE LLVKGYEIKLSQEEVVLADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVI AQLEIRQSELESIQEVLGDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALFAEIERNQTKLDQCQKFSQQYSTIVKDY ELQLMTYKAFVESQQKSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVEKVKELLGWVST LARNTQGKATSSETKESTDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKEKKQISEQLNALNKAYHDLCDGSANQLQ QLQSQLAHQTEQKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEEN QTKLSPRELTALREKLHQAKEQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGME QLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSL AQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFK EGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQL QEELAEHQVPVEKLQKVARDIMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEG KQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFE HLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKE REKDASSCQEQLDEFRKLVRTFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQG KTGSILPSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSP TKTETVKAQAESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAES -------------------------------------------------------------- >50610_50610_3_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000361689_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=2558AA_BP= MSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPLHEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVNK HLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF QISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRL LDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFK ETEILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGALNCEEKLTLA KNTLQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPP STLTTTHLKAEPLTKATHSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLPSVELQLETQQHIHTSVE ELGSSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRN YFSELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFLRNLQDSIK RKYSCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQR TKWKVISPTGNEAMVPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSAPGECHQIM KNLQAHYEDFLQDSRDSVLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISELKNIRLRLEEYEQRVVKRIQSLASSRTD RDAWQDNALRIAEQEHTQEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMDHVYGLSTVYLNKLKTVDVIVRSIQDAE LLVKGYEIKLSQEEVVLADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVI AQLEIRQSELESIQEVLGDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALFAEIERNQTKLDQCQKFSQQYSTIVKDY ELQLMTYKAFVESQQKSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVEKVKELLGWVST LARNTQGKATSSETKESTDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKEKKQISEQLNALNKAYHDLCDGSANQLQ QLQSQLAHQTEQKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEEN QTKLSPRELTALREKLHQAKEQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGME QLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSL AQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFK EGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQL QEELAEHQVPVEKLQKVARDIMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEG KQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFE HLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKE REKDASSCQEQLDEFRKLVRTFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQG KTGSILPSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSP TKTETVKAQAESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAES -------------------------------------------------------------- >50610_50610_4_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000372915_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=4652AA_BP= MLTFTPFSFRSLLPGLPGPPAAAPAWAMSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPLHEQKKRKSQDSVLD PAERAVVRVADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKL VNIRNDDITDGNPKLTLGLIWTIILHFQISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDM ERVQIQSNRENLEQAFEVAERLGVTRLLDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQH TILMSDKTFPQNPVELKALYNQYIHFKETEILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAV ERLELLLQIANKIQNGALNCEEKLTLAKNTLQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQ DELVTLRLECTNLYRKGHFTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKL ERAEWGNDLPSVELQLETQQHIHTSVEELGSSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAEL IWLNEKEEEELAYDWSDNNSNISAKRNYFSELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVK ENTAYFQFFSDARELESFLRNLQDSIKRKYSCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISV KAVCDYRQIEITICKNDECVLEDNSQRTKWKVISPTGNEAMVPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYL RKDLDLVQTWNLEKLRSSAPGECHQIMKNLQAHYEDFLQDSRDSVLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISEL KNIRLRLEEYEQRVVKRIQSLASSRTDRDAWQDNALRIAEQEHTQEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMD HVYGLSTVYLNKLKTVDVIVRSIQDAELLVKGYEIKLSQEEVVLADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSR LTPERNLDLERYQEKGSQLQERWHRVIAQLEIRQSELESIQEVLGDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALF AEIERNQTKLDQCQKFSQQYSTIVKDYELQLMTYKAFVESQQKSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRL EEEEKVVEEEKQEHVEKVKELLGWVSTLARNTQGKATSSETKESTDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKE KKQISEQLNALNKAYHDLCDGSANQLQQLQSQLAHQTEQKECRAVAGVIDLGTVEIFPIFKAMQKGLLDQDTGLVLLESQVIMSGLIAPE TGENLSLEEGIARNLINPQMYQQLRELQDALALISRLTESRGPLSVVEAIEKRIISETVGLKILEAHLATGGFSLSPSENCINLEEAFHQ GLISAWLHSVLESYLRTSKNLIDPNTAEKIGLLDLMQRCIVHQESGFKLLPVKQLAGGMVSLKSGRKVSIFRAVQEGLIDRQVTVRLLEA QLFAGGIVDPRTGHRLTVEEAVRHNLIDQDMACAILIRQLQTGGIIDTVTGQRLTIDEAVSNDLVAAKIALVILESLWSFMGLLWPESGE ILPITDALEQGIVSTELAHKILSNRQHIKALFLPATTEILSWKKAIESGILDRDLANNLKSICIPDVMPHMQLADSAEQNINPGAAVLPC SKSHPKATASQSENLLFQLMTHSYINVQNGQRLLLLDKELMETLTSRDEYQTSPPKVVEIGHQRQKTPEGLQESANVKISGTFSSGWTVR LPEFQFSSQNKEYPDREDCTTEKGKKTTVETEDSSVENPEQDLFVEQKERNPNIDALKVINKVKLEVQRQLIGTQREDQTAVSVRENASR GHLLTIPPAEAEGVPLVVDKDVFSVETPKKEHQPLRNTSFTCQNEQAHTLETEYIHDETGGSHIKPQSKKLQVQVKKTLGIKLELKSETD GNVHPLDKKEMLKKTFLAKDDHKESQEAQNIAGGSMMMSEKTDEEDSGREIFLSCSHPLELLEEATLNVLSAQLLDGGIFHEQTGQKLLL NEAISRGIVPSHTAVKLMEKLNMFQGFFDSQTCESLTTEEVINEGLMDEKLLHNVLMADKAISGVLDPRTQTLCSVKDAVTVGLLDKETA TRILERQVVTGGIIDLKRGKKVSVTLASTLGLVDVADQPELINLEKASKGRDAEKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGL LEREEAVRLLTKQVVDGGIIHHISGMRLSVDNAFRHGLIGEDLAEKLKRVENLNIHQIFNPETKENISLPKAIKLDLITSDLKREIQEVQ AFTGNFVDLISGQRLTLAEAKKEGLLTNEAVLSPGMMHGIVDPENCRIVPYSELVKKCKIDIESGQRYLEVIPFSDIKDGVSDKVLTLSQ AIQLGKVDFASTLKVLEAQANTGGIIDTATGKRLTLASALEEKLVDENMVRIIASHQVLNGGIVDIFSDQRVTLVEAIEKRLISPELANM IQIDSSEFSDHRAQIEKQEGIEVCALQNEFLGKDMLIACNQTAEMSCNKVEESERLFQVENQSAQEKVKVRVSDGEQAKKSREISLKEFG CKDQRKPRMSSDAKEFISIINPHNLKGKSLGQVSLTHPYSECDFKLKEVARNNMGNDTNEEQEKAVTKIEIISHMKQSTSCLDSEEIREN QGEVILEVQETYCETSGKLPSEQVLQQPMNARVKSKREKREVIVEESIRTCKPAFLSEEKLYQETAIRDEHDSHIKSQPREMTSSEKGKE ADTEMGFSITFKIEESSSQVVPQGISVKHLDALTLFSSKQANEGKVNNLSLCLTLKPEENLSREIACGAQSEPFPCMTPRPEGLHYQESD GKAQVTGPSQISKTDKSFQGTTRQETNYQDSWVTSKTKETKHQISSSNECKEKSYQEVSFDPARGLKLEEITVSRPDSKEVRYLEFSDRK DLHHQGSKSDDKLCGTLKSEIATQELTGEKFLEMANPNVAGLEAGSIEDIVTQRGSRVLGSFLPEKLFKGVSQKENTGQQNAIISPTVLE TSEEKTVSLTVCSAVKTEKTPQEKLRESPGSEQTPFMTAPEGKGNGGVNPEPFRATQNVFTRQLCLEHDEKLVSYLSLLRNIEMRTKQIQ PLELNLAELQDLLCQAKVLERELKDLTTLVSQELECVNQIIISQPQEVPAQLLKALEKDAKNLQKSLSSVSDTWNSRLLHFQNAVEIEKT KVLNQHTQLEGRLQDLRAWVGNKNLILNSKGSNSEIDVDSLNLCLQQYEDLKQPMAERKAQLDALAFDIQFFISEHAQDLSPQQNRQMLR LLNELQRSFQDILEQTAAQVDALQGHLQQMEQEALVKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQ DDIQNRATSFATVVKDIEGFMEENQTKLSPRELTALREKLHQAKEQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKID ALLDWVTSVGSSGGQLLTNLPGMEQLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHN LTPEEQQMLQQKLGELKEQYSTSLAQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVI SHKGDLRFVTISGQKVLDMENSFKEGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVE KLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVEKLQKVARDIMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQ SQSVQESLESLLQSIGEVEQNLEGKQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFE QLCLQQQEKESSLKKLLPQAEMFEHLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALD LCQHQDRVQNLRKDFTELQKTVKEREKDASSCQEQLDEFRKLVRTFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLV EEINCKGTSLENLIMEITAPDSQGKTGSILPSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKE ANSVLQWLESKEEVLKSMDAMSSPTKTETVKAQAESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATE -------------------------------------------------------------- >50610_50610_5_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000539005_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=2537AA_BP= MSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPLHEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVNK HLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF QISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRL LDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFK ETEILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGALNCEEKLTLA KNTLQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPP STLTTTHLKAEPLTKATHSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLPSVELQLETQQHIHTSVE ELGSSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRN YFSELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFLRNLQDSIK RKYSCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQR TKWKVISPTGNEAMVPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSAPGECHQIM KNLQAHYEDFLQDSRDSVLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISELKNIRLRLEEYEQRVVKRIQSLASSRTD RDAWQDNALRIAEQEHTQEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMDHVYGLSTVYLNKLKTVDVIVRSIQDAE LLVKGYEIKLSQEEVVLADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVI AQLEIRQSELESIQEVLGDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALFAEIERNQTKLDQCQKFSQQYSTIVKDY ELQLMTYKAFVESQQKSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVEKVKELLGWVST LARNTQGKATSSETKESTDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKEKKQISEQLNALNKAYHDLCDGSANQLQ QLQSQLAHQTEQKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEEN QTKLSPRELTALREKLHQAKEQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGME QLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSL AQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFK EGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQL QEELAEHQVPVEKLQKVARDIMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEG KQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFE HLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKE REKDASSCQEQLDEFRKLVRTFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQG KTDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSPTKTETVKAQAESNKAFLAELE QNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAESQLRPWLMEKELMMGVLGPLSI -------------------------------------------------------------- >50610_50610_6_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000545844_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=2558AA_BP= MSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPLHEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVNK HLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF QISDIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRL LDAEDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFK ETEILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGALNCEEKLTLA KNTLQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPP STLTTTHLKAEPLTKATHSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLPSVELQLETQQHIHTSVE ELGSSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRN YFSELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFLRNLQDSIK RKYSCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQR TKWKVISPTGNEAMVPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSAPGECHQIM KNLQAHYEDFLQDSRDSVLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISELKNIRLRLEEYEQRVVKRIQSLASSRTD RDAWQDNALRIAEQEHTQEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMDHVYGLSTVYLNKLKTVDVIVRSIQDAE LLVKGYEIKLSQEEVVLADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVI AQLEIRQSELESIQEVLGDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALFAEIERNQTKLDQCQKFSQQYSTIVKDY ELQLMTYKAFVESQQKSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVEKVKELLGWVST LARNTQGKATSSETKESTDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKEKKQISEQLNALNKAYHDLCDGSANQLQ QLQSQLAHQTEQKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEEN QTKLSPRELTALREKLHQAKEQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGME QLSGASLEKGALDTTDGYMGVNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSL AQSEAELKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFK EGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQL QEELAEHQVPVEKLQKVARDIMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEG KQVSSLSSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFE HLSGKLQQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKE REKDASSCQEQLDEFRKLVRTFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQG KTGSILPSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSP TKTETVKAQAESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAES -------------------------------------------------------------- >50610_50610_7_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000564288_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=4622AA_BP= MEMPLLDSSYLPPTIFILTHVLGVAGVLYWKRHARGRADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLE PAGLKTLRLVSMPSWCHTNNEEQAEEDDDDVPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQIS DIYISGESGDMSAKEKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRLLDA EDVDVPSPDEKSVITYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFKETE ILAKEREKGRIEELYKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGALNCEEKLTLAKNT LQADAAHLESGQPVQCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPPSTL TTTHLKAEPLTKATHSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLPSVELQLETQQHIHTSVEELG SSVKEARLYEGKMSQNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRNYFS ELTMELEEKQDVFRSLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFLRNLQDSIKRKY SCDHNTSLSRLEDLLQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQRTKW KVISPTGNEAMVPSVCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSAPGECHQIMKNL QAHYEDFLQDSRDSVLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISELKNIRLRLEEYEQRVVKRIQSLASSRTDRDA WQDNALRIAEQEHTQEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMDHVYGLSTVYLNKLKTVDVIVRSIQDAELLV KGYEIKLSQEEVVLADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVIAQL EIRQSELESIQEVLGDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALFAEIERNQTKLDQCQKFSQQYSTIVKDYELQ LMTYKAFVESQQKSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVEKVKELLGWVSTLAR NTQGKATSSETKESTDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKEKKQISEQLNALNKAYHDLCDGSANQLQQLQ SQLAHQTEQKECRAVAGVIDLGTVEIFPIFKAMQKGLLDQDTGLVLLESQVIMSGLIAPETGENLSLEEGIARNLINPQMYQQLRELQDA LALISRLTESRGPLSVVEAIEKRIISETVGLKILEAHLATGGFSLSPSENCINLEEAFHQGLISAWLHSVLESYLRTSKNLIDPNTAEKI GLLDLMQRCIVHQESGFKLLPVKQLAGGMVSLKSGRKVSIFRAVQEGLIDRQVTVRLLEAQLFAGGIVDPRTGHRLTVEEAVRHNLIDQD MACAILIRQLQTGGIIDTVTGQRLTIDEAVSNDLVAAKIALVILESLWSFMGLLWPESGEILPITDALEQGIVSTELAHKILSNRQHIKA LFLPATTEILSWKKAIESGILDRDLANNLKSICIPDVMPHMQLADSAEQNINPGAAVLPCSKSHPKATASQSENLLFQLMTHSYINVQNG QRLLLLDKELMETLTSRDEYQTSPPKVVEIGHQRQKTPEGLQESANVKISGTFSSGWTVRLPEFQFSSQNKEYPDREDCTTEKGKKTTVE TEDSSVENPEQDLFVEQKERNPNIDALKVINKVKLEVQRQLIGTQREDQTAVSVRENASRGHLLTIPPAEAEGVPLVVDKDVFSVETPKK EHQPLRNTSFTCQNEQAHTLETEYIHDETGGSHIKPQSKKLQVQVKKTLGIKLELKSETDGNVHPLDKKEMLKKTFLAKDDHKESQEAQN IAGGSMMMSEKTDEEDSGREIFLSCSHPLELLEEATLNVLSAQLLDGGIFHEQTGQKLLLNEAISRGIVPSHTAVKLMEKLNMFQGFFDS QTCESLTTEEVINEGLMDEKLLHNVLMADKAISGVLDPRTQTLCSVKDAVTVGLLDKETATRILERQVVTGGIIDLKRGKKVSVTLASTL GLVDVADQPELINLEKASKGRDAEKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHISGMRLSV DNAFRHGLIGEDLAEKLKRVENLNIHQIFNPETKENISLPKAIKLDLITSDLKREIQEVQAFTGNFVDLISGQRLTLAEAKKEGLLTNEA VLSPGMMHGIVDPENCRIVPYSELVKKCKIDIESGQRYLEVIPFSDIKDGVSDKVLTLSQAIQLGKVDFASTLKVLEAQANTGGIIDTAT GKRLTLASALEEKLVDENMVRIIASHQVLNGGIVDIFSDQRVTLVEAIEKRLISPELANMIQIDSSEFSDHRAQIEKQEGIEVCALQNEF LGKDMLIACNQTAEMSCNKVEESERLFQVENQSAQEKVKVRVSDGEQAKKSREISLKEFGCKDQRKPRMSSDAKEFISIINPHNLKGKSL GQVSLTHPYSECDFKLKEVARNNMGNDTNEEQEKAVTKIEIISHMKQSTSCLDSEEIRENQGEVILEVQETYCETSGKLPSEQVLQQPMN ARVKSKREKREVIVEESIRTCKPAFLSEEKLYQETAIRDEHDSHIKSQPREMTSSEKGKEADTEMGFSITFKIEESSSQVVPQGISVKHL DALTLFSSKQANEGKVNNLSLCLTLKPEENLSREIACGAQSEPFPCMTPRPEGLHYQESDGKAQVTGPSQISKTDKSFQGTTRQETNYQD SWVTSKTKETKHQISSSNECKEKSYQEVSFDPARGLKLEEITVSRPDSKEVRYLEFSDRKDLHHQGSKSDDKLCGTLKSEIATQELTGEK FLEMANPNVAGLEAGSIEDIVTQRGSRVLGSFLPEKLFKGVSQKENTGQQNAIISPTVLETSEEKTVSLTVCSAVKTEKTPQEKLRESPG SEQTPFMTAPEGKGNGGVNPEPFRATQNVFTRQLCLEHDEKLVSYLSLLRNIEMRTKQIQPLELNLAELQDLLCQAKVLERELKDLTTLV SQELECVNQIIISQPQEVPAQLLKALEKDAKNLQKSLSSVSDTWNSRLLHFQNAVEIEKTKVLNQHTQLEGRLQDLRAWVGNKNLILNSK GSNSEIDVDSLNLCLQQYEDLKQPMAERKAQLDALAFDIQFFISEHAQDLSPQQNRQMLRLLNELQRSFQDILEQTAAQVDALQGHLQQM EQEALVKTLQKQQNTCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEENQTKLSP RELTALREKLHQAKEQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGMEQLSGAS LEKGALDTTDGYMGVNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSEAE LKQVQTLQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFKEGKEPS EIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQLQEELAE HQVPVEKLQKVARDIMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEGKQVSSL SSGVIQEALATNMKLKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFEHLSGKL QQFMENKSRMLASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKEREKDAS SCQEQLDEFRKLVRTFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQGKTGSIL PSVGSSVGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSPTKTETV KAQAESNKAFLAELEQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAESQLRPWL -------------------------------------------------------------- >50610_50610_8_MACF1-LSAMP_MACF1_chr1_39847824_ENST00000567887_LSAMP_chr3_116163802_ENST00000490035_length(amino acids)=4698AA_BP= MLPKSQCSLWDPFCLLTFTPFSFRSLLPGLPGPPAAAPAWAMSSSDEETLSERSCRSERSCRSERSYRSERSGSLSPCPPGDTLPWNLPL HEQKKRKSQDSVLDPAERAVVRVADERDRVQKKTFTKWVNKHLMKVRKHINDLYEDLRDGHNLISLLEVLSGIKLEPAGLKTLRLVSMPS WCHTNNEEQAEEDDDDVPREKGRMRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIYISGESGDMSAK EKLLLWTQKVTAGYTGIKCTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVAERLGVTRLLDAEDVDVPSPDEKSVI TYVSSIYDAFPKVPEGGEGISATEVDSRWQEYQSRVDSLIPWIKQHTILMSDKTFPQNPVELKALYNQYIHFKETEILAKEREKGRIEEL YKLLEVWIEFGRIKLPQGYHPNDVEEEWGKLIIEMLEREKSLRPAVERLELLLQIANKIQNGALNCEEKLTLAKNTLQADAAHLESGQPV QCESDVIMYIQECEGLIRQLQVDLQILRDENYYQLEELAFRVMRLQDELVTLRLECTNLYRKGHFTSLELVPPSTLTTTHLKAEPLTKAT HSSSTSWFRKPMTRAELVAISSSEDEGNLRFVYELLSWVEEMQMKLERAEWGNDLPSVELQLETQQHIHTSVEELGSSVKEARLYEGKMS QNFHTSYAETLGKLETQYCKLKETSSFRMRHLQSLHKFVSRATAELIWLNEKEEEELAYDWSDNNSNISAKRNYFSELTMELEEKQDVFR SLQDTAELLSLENHPAKQTVEAYSAAVQSQLQWMKQLCLCVEQHVKENTAYFQFFSDARELESFLRNLQDSIKRKYSCDHNTSLSRLEDL LQDSMDEKEQLIQSKSSVASLVGRSKTIVQLKPRSPDHVLKNTISVKAVCDYRQIEITICKNDECVLEDNSQRTKWKVISPTGNEAMVPS VCFLIPPPNKDAIEMASRVEQSYQKVMALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSAPGECHQIMKNLQAHYEDFLQDSRDS VLFSVADRLRLEEEVEACKARFQHLMKSMENEDKEETVAKMYISELKNIRLRLEEYEQRVVKRIQSLASSRTDRDAWQDNALRIAEQEHT QEDLQQLRSDLDAVSMKCDSFLHQSPSSSSVPTLRSELNLLVEKMDHVYGLSTVYLNKLKTVDVIVRSIQDAELLVKGYEIKLSQEEVVL ADLSALEAHWSTLRHWLSDVKDKNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVIAQLEIRQSELESIQEVL GDYRACHGTLIKWIEETTAQQEMMKPGQAEDSRVLSEQLSQQTALFAEIERNQTKLDQCQKFSQQYSTIVKDYELQLMTYKAFVESQQKS PGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQEHVEKVKELLGWVSTLARNTQGKATSSETKES TDIEKAILEQQVLSEELTTKKEQVSEAIKTSQIFLAKHGHKLSEKEKKQISEQLNALNKAYHDLCDGSANQLQQLQSQLAHQTEQKECRA VAGVIDLGTVEIFPIFKAMQKGLLDQDTGLVLLESQVIMSGLIAPETGENLSLEEGIARNLINPQMYQQLRELQDALALISRLTESRGPL SVVEAIEKRIISETVGLKILEAHLATGGFSLSPSENCINLEEAFHQGLISAWLHSVLESYLRTSKNLIDPNTAEKIGLLDLMQRCIVHQE SGFKLLPVKQLAGGMVSLKSGRKVSIFRAVQEGLIDRQVTVRLLEAQLFAGGIVDPRTGHRLTVEEAVRHNLIDQDMACAILIRQLQTGG IIDTVTGQRLTIDEAVSNDLVAAKIALVILESLWSFMGLLWPESGEILPITDALEQGIVSTELAHKILSNRQHIKALFLPATTEILSWKK AIESGILDRDLANNLKSICIPDVMPHMQLADSAEQNINPGAAVLPCSKSHPKATASQSENLLFQLMTHSYINVQNGQRLLLLDKELMETL TSRDEYQTSPPKVVEIGHQRQKTPEGLQESANVKISGTFSSGWTVRLPEFQFSSQNKEYPDREDCTTEKGKKTTVETEDSSVENPEQDLF VEQKERNPNIDALKVINKVKLEVQRQLIGTQREDQTAVSVRENASRGHLLTIPPAEAEGVPLVVDKDVFSVETPKKEHQPLRNTSFTCQN EQAHTLETEYIHDETGGSHIKPQSKKLQVQVKKTLGIKLELKSETDGNVHPLDKKEMLKKTFLAKDDHKESQEAQNIAGGSMMMSEKTDE EDSGREIFLSCSHPLELLEEATLNVLSAQLLDGGIFHEQTGQKLLLNEAISRGIVPSHTAVKLMEKLNMFQGFFDSQTCESLTTEEVINE GLMDEKLLHNVLMADKAISGVLDPRTQTLCSVKDAVTVGLLDKETATRILERQVVTGGIIDLKRGKKVSVTLASTLGLVDVADQPELINL EKASKGRDAEKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHISGMRLSVDNAFRHGLIGEDLA EKLKRVENLNIHQIFNPETKENISLPKAIKLDLITSDLKREIQEVQAFTGNFVDLISGQRLTLAEAKKEGLLTNEAVLSPGMMHGIVDPE NCRIVPYSELVKKCKIDIESGQRYLEVIPFSDIKDGVSDKVLTLSQAIQLGKVDFASTLKVLEAQANTGGIIDTATGKRLTLASALEEKL VDENMVRIIASHQVLNGGIVDIFSDQRVTLVEAIEKRLISPELANMIQIDSSEFSDHRAQIEKQEGIEVCALQNEFLGKDMLIACNQTAE MSCNKVEESERLFQVENQSAQEKVKVRVSDGEQAKKSREISLKEFGCKDQRKPRMSSDAKEFISIINPHNLKGKSLGQVSLTHPYSECDF KLKEVARNNMGNDTNEEQEKAVTKIEIISHMKQSTSCLDSEEIRENQGEVILEVQETYCETSGKLPSEQVLQQPMNARVKSKREKREVIV EESIRTCKPAFLSEEKLYQETAIRDEHDSHIKSQPREMTSSEKGKEADTEMGFSITFKIEESSSQVVPQGISVKHLDALTLFSSKQANEG KVNNLSLCLTLKPEENLSREIACGAQSEPFPCMTPRPEGLHYQESDGKAQVTGPSQISKTDKSFQGTTRQETNYQDSWVTSKTKETKHQI SSSNECKEKSYQEVSFDPARGLKLEEITVSRPDSKEVRYLEFSDRKDLHHQGSKSDDKLCGTLKSEIATQELTGEKFLEMANPNVAGLEA GSIEDIVTQRGSRVLGSFLPEKLFKGVSQKENTGQQNAIISPTVLETSEEKTVSLTVCSAVKTEKTPQEKLRESPGSEQTPFMTAPEGKG NGGVNPEPFRATQNVFTRQLCLEHDEKLVSYLSLLRNIEMRTKQIQPLELNLAELQDLLCQAKVLERELKDLTTLVSQELECVNQIIISQ PQEVPAQLLKALEKDAKNLQKSLSSVSDTWNSRLLHFQNAVEIEKTKVLNQHTQLEGRLQDLRAWVGNKNLILNSKGSNSEIDVDSLNLC LQQYEDLKQPMAERKAQLDALAFDIQFFISEHAQDLSPQQNRQMLRLLNELQRSFQDILEQTAAQVDALQGHLQQMEQEALVKTLQKQQN TCHQQLEDLCSWVGQAERALAGHQGRTTQQDLSALQKNQSDLKDLQDDIQNRATSFATVVKDIEGFMEENQTKLSPRELTALREKLHQAK EQYEALQEETRVAQKELEEAVTSALQQETEKSKAAKELAENKKKIDALLDWVTSVGSSGGQLLTNLPGMEQLSGASLEKGALDTTDGYMG VNQAPEKLDKQCEMMKARHQELLSQQQNFILATQSAQAFLDQHGHNLTPEEQQMLQQKLGELKEQYSTSLAQSEAELKQVQTLQDELQKF LQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDMENSFKEGKEPSEIGNLVKDKLKDAT ERYTALHSKCTRLGSHLNMLLGQYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVEKLQKVARD IMEIEGEPAPDHRHVQETTDSILSHFQSLSYSLAERSSLLQKAIAQSQSVQESLESLLQSIGEVEQNLEGKQVSSLSSGVIQEALATNMK LKQDIARQKSSLEATREMVTRFMETADSTTAAVLQGKLAEVSQRFEQLCLQQQEKESSLKKLLPQAEMFEHLSGKLQQFMENKSRMLASG NQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTELQKTVKEREKDASSCQEQLDEFRKLVR TFQKWLKETEGSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINCKGTSLENLIMEITAPDSQGKTGSILPSVGSSVGSVNGYH TCKDLTEIQCDMSDVNLKYEKLGGVLHERQESLQAILNRMEEVHKEANSVLQWLESKEEVLKSMDAMSSPTKTETVKAQAESNKAFLAEL EQNSPKIQKVKEALAGLLVTYPNSQEAENWKKIQEELNSRWERATEVTVARQRQLEESASHLACFQAAESQLRPWLMEKELMMGVLGPLS -------------------------------------------------------------- |
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Fusion Protein Functional Features |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:39847824/chr3:116163802) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
MACF1 | LSAMP |
FUNCTION: [Isoform 2]: F-actin-binding protein which plays a role in cross-linking actin to other cytoskeletal proteins and also binds to microtubules (PubMed:15265687, PubMed:20937854). Plays an important role in ERBB2-dependent stabilization of microtubules at the cell cortex (PubMed:20937854). Acts as a positive regulator of Wnt receptor signaling pathway and is involved in the translocation of AXIN1 and its associated complex (composed of APC, CTNNB1 and GSK3B) from the cytoplasm to the cell membrane (By similarity). Has actin-regulated ATPase activity and is essential for controlling focal adhesions (FAs) assembly and dynamics (By similarity). Interaction with CAMSAP3 at the minus ends of non-centrosomal microtubules tethers microtubules minus-ends to actin filaments, regulating focal adhesion size and cell migration (PubMed:27693509). May play role in delivery of transport vesicles containing GPI-linked proteins from the trans-Golgi network through its interaction with GOLGA4 (PubMed:15265687). Plays a key role in wound healing and epidermal cell migration (By similarity). Required for efficient upward migration of bulge cells in response to wounding and this function is primarily rooted in its ability to coordinate microtubule dynamics and polarize hair follicle stem cells (By similarity). As a regulator of actin and microtubule arrangement and stabilization, it plays an essential role in neurite outgrowth, branching and spine formation during brain development (By similarity). {ECO:0000250|UniProtKB:Q9QXZ0, ECO:0000269|PubMed:15265687, ECO:0000269|PubMed:20937854, ECO:0000269|PubMed:27693509}. | FUNCTION: Mediates selective neuronal growth and axon targeting. Contributes to the guidance of developing axons and remodeling of mature circuits in the limbic system. Essential for normal growth of the hyppocampal mossy fiber projection (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- Retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1122_1127 | 3056.0 | 5939.0 | Compositional bias | Note=Poly-Ser |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1414_1417 | 3056.0 | 5939.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1986_1989 | 3056.0 | 5939.0 | Compositional bias | Note=Poly-Leu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 698_703 | 3056.0 | 5939.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1122_1127 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Ser |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1414_1417 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1986_1989 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Leu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 698_703 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1122_1127 | 4621.0 | 7389.0 | Compositional bias | Note=Poly-Ser |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1414_1417 | 4621.0 | 7389.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1986_1989 | 4621.0 | 7389.0 | Compositional bias | Note=Poly-Leu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 698_703 | 4621.0 | 7389.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1122_1127 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Ser |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1414_1417 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1986_1989 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Leu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 698_703 | 2554.0 | 5431.0 | Compositional bias | Note=Poly-Glu |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 194_298 | 3056.0 | 5939.0 | Domain | Calponin-homology (CH) 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 78_181 | 3056.0 | 5939.0 | Domain | Calponin-homology (CH) 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 868_925 | 3056.0 | 5939.0 | Domain | SH3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 194_298 | 2554.0 | 5431.0 | Domain | Calponin-homology (CH) 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 78_181 | 2554.0 | 5431.0 | Domain | Calponin-homology (CH) 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 868_925 | 2554.0 | 5431.0 | Domain | SH3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 194_298 | 4621.0 | 7389.0 | Domain | Calponin-homology (CH) 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 78_181 | 4621.0 | 7389.0 | Domain | Calponin-homology (CH) 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 868_925 | 4621.0 | 7389.0 | Domain | SH3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 194_298 | 2554.0 | 5431.0 | Domain | Calponin-homology (CH) 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 78_181 | 2554.0 | 5431.0 | Domain | Calponin-homology (CH) 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 868_925 | 2554.0 | 5431.0 | Domain | SH3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1_295 | 3056.0 | 5939.0 | Region | Note=Actin-binding |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1_295 | 2554.0 | 5431.0 | Region | Note=Actin-binding |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1_295 | 4621.0 | 7389.0 | Region | Note=Actin-binding |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1_295 | 2554.0 | 5431.0 | Region | Note=Actin-binding |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1050_1073 | 3056.0 | 5939.0 | Repeat | Note=LRR 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1128_1154 | 3056.0 | 5939.0 | Repeat | Note=LRR 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1187_1210 | 3056.0 | 5939.0 | Repeat | Note=LRR 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1257_1282 | 3056.0 | 5939.0 | Repeat | Note=LRR 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 148_171 | 3056.0 | 5939.0 | Repeat | Note=LRR 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1577_1621 | 3056.0 | 5939.0 | Repeat | Note=Plectin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1654_1696 | 3056.0 | 5939.0 | Repeat | Note=Plectin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1769_1809 | 3056.0 | 5939.0 | Repeat | Note=Plectin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1811_1848 | 3056.0 | 5939.0 | Repeat | Note=Plectin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 1855_1886 | 3056.0 | 5939.0 | Repeat | Note=Plectin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 2290_2332 | 3056.0 | 5939.0 | Repeat | Note=Plectin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 2367_2410 | 3056.0 | 5939.0 | Repeat | Note=Plectin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 240_264 | 3056.0 | 5939.0 | Repeat | Note=LRR 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 2411_2437 | 3056.0 | 5939.0 | Repeat | Note=Plectin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 2501_2543 | 3056.0 | 5939.0 | Repeat | Note=Plectin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 2581_2612 | 3056.0 | 5939.0 | Repeat | Note=Plectin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 2686_2730 | 3056.0 | 5939.0 | Repeat | Note=Plectin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 377_399 | 3056.0 | 5939.0 | Repeat | Note=LRR 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 441_464 | 3056.0 | 5939.0 | Repeat | Note=LRR 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1050_1073 | 2554.0 | 5431.0 | Repeat | Note=LRR 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1128_1154 | 2554.0 | 5431.0 | Repeat | Note=LRR 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1187_1210 | 2554.0 | 5431.0 | Repeat | Note=LRR 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1257_1282 | 2554.0 | 5431.0 | Repeat | Note=LRR 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 148_171 | 2554.0 | 5431.0 | Repeat | Note=LRR 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1577_1621 | 2554.0 | 5431.0 | Repeat | Note=Plectin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1654_1696 | 2554.0 | 5431.0 | Repeat | Note=Plectin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1769_1809 | 2554.0 | 5431.0 | Repeat | Note=Plectin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1811_1848 | 2554.0 | 5431.0 | Repeat | Note=Plectin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 1855_1886 | 2554.0 | 5431.0 | Repeat | Note=Plectin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 2290_2332 | 2554.0 | 5431.0 | Repeat | Note=Plectin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 2367_2410 | 2554.0 | 5431.0 | Repeat | Note=Plectin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 240_264 | 2554.0 | 5431.0 | Repeat | Note=LRR 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 2411_2437 | 2554.0 | 5431.0 | Repeat | Note=Plectin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 2501_2543 | 2554.0 | 5431.0 | Repeat | Note=Plectin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 377_399 | 2554.0 | 5431.0 | Repeat | Note=LRR 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 441_464 | 2554.0 | 5431.0 | Repeat | Note=LRR 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1050_1073 | 4621.0 | 7389.0 | Repeat | Note=LRR 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1128_1154 | 4621.0 | 7389.0 | Repeat | Note=LRR 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1187_1210 | 4621.0 | 7389.0 | Repeat | Note=LRR 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1257_1282 | 4621.0 | 7389.0 | Repeat | Note=LRR 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 148_171 | 4621.0 | 7389.0 | Repeat | Note=LRR 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1577_1621 | 4621.0 | 7389.0 | Repeat | Note=Plectin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1654_1696 | 4621.0 | 7389.0 | Repeat | Note=Plectin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1769_1809 | 4621.0 | 7389.0 | Repeat | Note=Plectin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1811_1848 | 4621.0 | 7389.0 | Repeat | Note=Plectin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 1855_1886 | 4621.0 | 7389.0 | Repeat | Note=Plectin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 2290_2332 | 4621.0 | 7389.0 | Repeat | Note=Plectin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 2367_2410 | 4621.0 | 7389.0 | Repeat | Note=Plectin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 240_264 | 4621.0 | 7389.0 | Repeat | Note=LRR 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 2411_2437 | 4621.0 | 7389.0 | Repeat | Note=Plectin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 2501_2543 | 4621.0 | 7389.0 | Repeat | Note=Plectin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 2581_2612 | 4621.0 | 7389.0 | Repeat | Note=Plectin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 2686_2730 | 4621.0 | 7389.0 | Repeat | Note=Plectin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 3239_3262 | 4621.0 | 7389.0 | Repeat | Note=LRR 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 3264_3283 | 4621.0 | 7389.0 | Repeat | Note=LRR 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 3646_3669 | 4621.0 | 7389.0 | Repeat | Note=LRR 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 3696_3720 | 4621.0 | 7389.0 | Repeat | Note=LRR 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 377_399 | 4621.0 | 7389.0 | Repeat | Note=LRR 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 3883_3957 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 3936_3958 | 4621.0 | 7389.0 | Repeat | Note=LRR 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4000_4108 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4125_4150 | 4621.0 | 7389.0 | Repeat | Note=LRR 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4261_4287 | 4621.0 | 7389.0 | Repeat | Note=LRR 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 441_464 | 4621.0 | 7389.0 | Repeat | Note=LRR 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4466_4574 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4511_4534 | 4621.0 | 7389.0 | Repeat | Note=LRR 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4601_4624 | 4621.0 | 7389.0 | Repeat | Note=LRR 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1050_1073 | 2554.0 | 5431.0 | Repeat | Note=LRR 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1128_1154 | 2554.0 | 5431.0 | Repeat | Note=LRR 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1187_1210 | 2554.0 | 5431.0 | Repeat | Note=LRR 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1257_1282 | 2554.0 | 5431.0 | Repeat | Note=LRR 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 148_171 | 2554.0 | 5431.0 | Repeat | Note=LRR 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1577_1621 | 2554.0 | 5431.0 | Repeat | Note=Plectin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1654_1696 | 2554.0 | 5431.0 | Repeat | Note=Plectin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1769_1809 | 2554.0 | 5431.0 | Repeat | Note=Plectin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1811_1848 | 2554.0 | 5431.0 | Repeat | Note=Plectin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 1855_1886 | 2554.0 | 5431.0 | Repeat | Note=Plectin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 2290_2332 | 2554.0 | 5431.0 | Repeat | Note=Plectin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 2367_2410 | 2554.0 | 5431.0 | Repeat | Note=Plectin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 240_264 | 2554.0 | 5431.0 | Repeat | Note=LRR 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 2411_2437 | 2554.0 | 5431.0 | Repeat | Note=Plectin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 2501_2543 | 2554.0 | 5431.0 | Repeat | Note=Plectin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 377_399 | 2554.0 | 5431.0 | Repeat | Note=LRR 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 441_464 | 2554.0 | 5431.0 | Repeat | Note=LRR 4 |
Tgene | LSAMP | chr1:39847824 | chr3:116163802 | ENST00000490035 | 0 | 7 | 132_214 | 0 | 339.0 | Domain | Note=Ig-like C2-type 2 | |
Tgene | LSAMP | chr1:39847824 | chr3:116163802 | ENST00000490035 | 0 | 7 | 219_304 | 0 | 339.0 | Domain | Note=Ig-like C2-type 3 | |
Tgene | LSAMP | chr1:39847824 | chr3:116163802 | ENST00000490035 | 0 | 7 | 29_122 | 0 | 339.0 | Domain | Note=Ig-like C2-type 1 |
- Not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7054_7065 | 3056.0 | 5939.0 | Calcium binding | 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7090_7101 | 3056.0 | 5939.0 | Calcium binding | 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7054_7065 | 2554.0 | 5431.0 | Calcium binding | 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7090_7101 | 2554.0 | 5431.0 | Calcium binding | 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7054_7065 | 4621.0 | 7389.0 | Calcium binding | 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7090_7101 | 4621.0 | 7389.0 | Calcium binding | 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7054_7065 | 2554.0 | 5431.0 | Calcium binding | 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7090_7101 | 2554.0 | 5431.0 | Calcium binding | 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7222_7351 | 3056.0 | 5939.0 | Compositional bias | Note=Ser-rich |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7222_7351 | 2554.0 | 5431.0 | Compositional bias | Note=Ser-rich |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7222_7351 | 4621.0 | 7389.0 | Compositional bias | Note=Ser-rich |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7222_7351 | 2554.0 | 5431.0 | Compositional bias | Note=Ser-rich |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7041_7076 | 3056.0 | 5939.0 | Domain | EF-hand 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7077_7112 | 3056.0 | 5939.0 | Domain | EF-hand 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7117_7189 | 3056.0 | 5939.0 | Domain | GAR |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7041_7076 | 2554.0 | 5431.0 | Domain | EF-hand 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7077_7112 | 2554.0 | 5431.0 | Domain | EF-hand 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7117_7189 | 2554.0 | 5431.0 | Domain | GAR |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7041_7076 | 4621.0 | 7389.0 | Domain | EF-hand 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7077_7112 | 4621.0 | 7389.0 | Domain | EF-hand 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7117_7189 | 4621.0 | 7389.0 | Domain | GAR |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7041_7076 | 2554.0 | 5431.0 | Domain | EF-hand 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7077_7112 | 2554.0 | 5431.0 | Domain | EF-hand 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7117_7189 | 2554.0 | 5431.0 | Domain | GAR |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7117_7388 | 3056.0 | 5939.0 | Region | C-terminal tail |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 7313_7328 | 3056.0 | 5939.0 | Region | Note=4 X 4 AA tandem repeats of [GS]-S-R-[AR] |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7117_7388 | 2554.0 | 5431.0 | Region | C-terminal tail |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 7313_7328 | 2554.0 | 5431.0 | Region | Note=4 X 4 AA tandem repeats of [GS]-S-R-[AR] |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7117_7388 | 4621.0 | 7389.0 | Region | C-terminal tail |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 7313_7328 | 4621.0 | 7389.0 | Region | Note=4 X 4 AA tandem repeats of [GS]-S-R-[AR] |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7117_7388 | 2554.0 | 5431.0 | Region | C-terminal tail |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 7313_7328 | 2554.0 | 5431.0 | Region | Note=4 X 4 AA tandem repeats of [GS]-S-R-[AR] |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 3239_3262 | 3056.0 | 5939.0 | Repeat | Note=LRR 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 3264_3283 | 3056.0 | 5939.0 | Repeat | Note=LRR 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 3646_3669 | 3056.0 | 5939.0 | Repeat | Note=LRR 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 3696_3720 | 3056.0 | 5939.0 | Repeat | Note=LRR 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 3883_3957 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 3936_3958 | 3056.0 | 5939.0 | Repeat | Note=LRR 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4000_4108 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4125_4150 | 3056.0 | 5939.0 | Repeat | Note=LRR 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4261_4287 | 3056.0 | 5939.0 | Repeat | Note=LRR 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4466_4574 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4511_4534 | 3056.0 | 5939.0 | Repeat | Note=LRR 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4601_4624 | 3056.0 | 5939.0 | Repeat | Note=LRR 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4769_4792 | 3056.0 | 5939.0 | Repeat | Note=LRR 18 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4800_4904 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 4909_5012 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5051_5076 | 3056.0 | 5939.0 | Repeat | Note=LRR 19 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5172_5194 | 3056.0 | 5939.0 | Repeat | Note=LRR 20 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5236_5341 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5281_5304 | 3056.0 | 5939.0 | Repeat | Note=LRR 21 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5348_5450 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5455_5557 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5695_5719 | 3056.0 | 5939.0 | Repeat | Note=LRR 22 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5783_5885 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 5804_5828 | 3056.0 | 5939.0 | Repeat | Note=LRR 23 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6005_6110 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6115_6219 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6225_6328 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6333_6439 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6443_6547 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6496_6519 | 3056.0 | 5939.0 | Repeat | Note=LRR 24 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6552_6658 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6665_6766 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000289893 | + | 20 | 64 | 6771_6874 | 3056.0 | 5939.0 | Repeat | Note=Spectrin 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 2581_2612 | 2554.0 | 5431.0 | Repeat | Note=Plectin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 2686_2730 | 2554.0 | 5431.0 | Repeat | Note=Plectin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 3239_3262 | 2554.0 | 5431.0 | Repeat | Note=LRR 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 3264_3283 | 2554.0 | 5431.0 | Repeat | Note=LRR 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 3646_3669 | 2554.0 | 5431.0 | Repeat | Note=LRR 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 3696_3720 | 2554.0 | 5431.0 | Repeat | Note=LRR 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 3883_3957 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 3936_3958 | 2554.0 | 5431.0 | Repeat | Note=LRR 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4000_4108 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4125_4150 | 2554.0 | 5431.0 | Repeat | Note=LRR 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4261_4287 | 2554.0 | 5431.0 | Repeat | Note=LRR 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4466_4574 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4511_4534 | 2554.0 | 5431.0 | Repeat | Note=LRR 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4601_4624 | 2554.0 | 5431.0 | Repeat | Note=LRR 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4769_4792 | 2554.0 | 5431.0 | Repeat | Note=LRR 18 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4800_4904 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 4909_5012 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5051_5076 | 2554.0 | 5431.0 | Repeat | Note=LRR 19 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5172_5194 | 2554.0 | 5431.0 | Repeat | Note=LRR 20 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5236_5341 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5281_5304 | 2554.0 | 5431.0 | Repeat | Note=LRR 21 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5348_5450 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5455_5557 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5695_5719 | 2554.0 | 5431.0 | Repeat | Note=LRR 22 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5783_5885 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 5804_5828 | 2554.0 | 5431.0 | Repeat | Note=LRR 23 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6005_6110 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6115_6219 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6225_6328 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6333_6439 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6443_6547 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6496_6519 | 2554.0 | 5431.0 | Repeat | Note=LRR 24 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6552_6658 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6665_6766 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000361689 | + | 50 | 93 | 6771_6874 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4769_4792 | 4621.0 | 7389.0 | Repeat | Note=LRR 18 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4800_4904 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 4909_5012 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5051_5076 | 4621.0 | 7389.0 | Repeat | Note=LRR 19 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5172_5194 | 4621.0 | 7389.0 | Repeat | Note=LRR 20 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5236_5341 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5281_5304 | 4621.0 | 7389.0 | Repeat | Note=LRR 21 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5348_5450 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5455_5557 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5695_5719 | 4621.0 | 7389.0 | Repeat | Note=LRR 22 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5783_5885 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 5804_5828 | 4621.0 | 7389.0 | Repeat | Note=LRR 23 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6005_6110 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6115_6219 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6225_6328 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6333_6439 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6443_6547 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6496_6519 | 4621.0 | 7389.0 | Repeat | Note=LRR 24 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6552_6658 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6665_6766 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000372915 | + | 55 | 97 | 6771_6874 | 4621.0 | 7389.0 | Repeat | Note=Spectrin 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 2581_2612 | 2554.0 | 5431.0 | Repeat | Note=Plectin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 2686_2730 | 2554.0 | 5431.0 | Repeat | Note=Plectin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 3239_3262 | 2554.0 | 5431.0 | Repeat | Note=LRR 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 3264_3283 | 2554.0 | 5431.0 | Repeat | Note=LRR 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 3646_3669 | 2554.0 | 5431.0 | Repeat | Note=LRR 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 3696_3720 | 2554.0 | 5431.0 | Repeat | Note=LRR 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 3883_3957 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 1 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 3936_3958 | 2554.0 | 5431.0 | Repeat | Note=LRR 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4000_4108 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 2 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4125_4150 | 2554.0 | 5431.0 | Repeat | Note=LRR 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4261_4287 | 2554.0 | 5431.0 | Repeat | Note=LRR 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4466_4574 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 3 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4511_4534 | 2554.0 | 5431.0 | Repeat | Note=LRR 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4601_4624 | 2554.0 | 5431.0 | Repeat | Note=LRR 17 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4769_4792 | 2554.0 | 5431.0 | Repeat | Note=LRR 18 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4800_4904 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 4 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 4909_5012 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 5 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5051_5076 | 2554.0 | 5431.0 | Repeat | Note=LRR 19 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5172_5194 | 2554.0 | 5431.0 | Repeat | Note=LRR 20 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5236_5341 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 6 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5281_5304 | 2554.0 | 5431.0 | Repeat | Note=LRR 21 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5348_5450 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 7 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5455_5557 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 8 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5695_5719 | 2554.0 | 5431.0 | Repeat | Note=LRR 22 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5783_5885 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 9 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 5804_5828 | 2554.0 | 5431.0 | Repeat | Note=LRR 23 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6005_6110 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 10 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6115_6219 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 11 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6225_6328 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 12 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6333_6439 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 13 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6443_6547 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 14 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6496_6519 | 2554.0 | 5431.0 | Repeat | Note=LRR 24 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6552_6658 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 15 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6665_6766 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 16 |
Hgene | MACF1 | chr1:39847824 | chr3:116163802 | ENST00000545844 | + | 51 | 94 | 6771_6874 | 2554.0 | 5431.0 | Repeat | Note=Spectrin 17 |
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Fusion Protein-Protein Interaction |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
Gene | PPI interactors |
Protein-protein interactors based on sequence similarity (STRING) |
Gene | STRING network |
MACF1 | |
LSAMP |
- Retained interactions in fusion protein (protein functional feature from UniProt). |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost interactions due to fusion (protein functional feature from UniProt). |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs to MACF1-LSAMP |
Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to MACF1-LSAMP |
Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
Hgene | Tgene | Disease | Source | PMID |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |