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Center for Computational Systems Medicine level2
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein Structure

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pLDDT scores

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Ramachandran Plot of Fusion Protein Structure

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:NTRK2-AFAP1

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: NTRK2-AFAP1
FusionPDB ID: 60695
FusionGDB2.0 ID: 60695
HgeneTgene
Gene symbol

NTRK2

AFAP1

Gene ID

4915

60312

Gene nameneurotrophic receptor tyrosine kinase 2actin filament associated protein 1
SynonymsEIEE58|GP145-TrkB|OBHD|TRKB|trk-BAFAP|AFAP-110|AFAP110
Cytomap

9q21.33

4p16.1

Type of geneprotein-codingprotein-coding
DescriptionBDNF/NT-3 growth factors receptorBDNF-tropomyosine receptor kinase Bneurotrophic tyrosine kinase receptor type 2tropomyosin-related kinase Btyrosine kinase receptor Bactin filament-associated protein 1110 kDa actin filament-associated proteinactin filament-associated protein, 110 kDa
Modification date2020031320200313
UniProtAcc

Q16620

Q8N4X5

Ensembl transtripts involved in fusion geneENST idsENST00000277120, ENST00000304053, 
ENST00000323115, ENST00000359847, 
ENST00000376208, ENST00000376213, 
ENST00000376214, ENST00000395866, 
ENST00000395882, 
ENST00000513842, 
ENST00000358461, ENST00000360265, 
ENST00000382543, ENST00000420658, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score8 X 8 X 5=3204 X 4 X 3=48
# samples 84
** MAII scorelog2(8/320*10)=-2
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: NTRK2 [Title/Abstract] AND AFAP1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)AFAP1(7780489)-NTRK2(87356807), # samples:3
NTRK2(87342874)-AFAP1(7776630), # samples:2
Anticipated loss of major functional domain due to fusion event.AFAP1-NTRK2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
AFAP1-NTRK2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
NTRK2-AFAP1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
NTRK2-AFAP1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
NTRK2-AFAP1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
NTRK2-AFAP1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across NTRK2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across AFAP1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LGGTCGA-HT-7680-01ANTRK2chr9

87342874

+AFAP1chr4

7776630

-
ChimerDB4LGGTCGA-HT-7680NTRK2chr9

87342874

+AFAP1chr4

7776630

-


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000376214NTRK2chr987342874+ENST00000360265AFAP1chr47776630-769620979292644571
ENST00000376214NTRK2chr987342874+ENST00000358461AFAP1chr47776630-769520979292644571
ENST00000376214NTRK2chr987342874+ENST00000420658AFAP1chr47776630-769520979292644571
ENST00000376214NTRK2chr987342874+ENST00000382543AFAP1chr47776630-278620979292644571
ENST00000376213NTRK2chr987342874+ENST00000360265AFAP1chr47776630-769620979292644571
ENST00000376213NTRK2chr987342874+ENST00000358461AFAP1chr47776630-769520979292644571
ENST00000376213NTRK2chr987342874+ENST00000420658AFAP1chr47776630-769520979292644571
ENST00000376213NTRK2chr987342874+ENST00000382543AFAP1chr47776630-278620979292644571
ENST00000395882NTRK2chr987342874+ENST00000360265AFAP1chr47776630-730817095412256571
ENST00000395882NTRK2chr987342874+ENST00000358461AFAP1chr47776630-730717095412256571
ENST00000395882NTRK2chr987342874+ENST00000420658AFAP1chr47776630-730717095412256571
ENST00000395882NTRK2chr987342874+ENST00000382543AFAP1chr47776630-239817095412256571
ENST00000304053NTRK2chr987342874+ENST00000360265AFAP1chr47776630-724116424742189571
ENST00000304053NTRK2chr987342874+ENST00000358461AFAP1chr47776630-724016424742189571
ENST00000304053NTRK2chr987342874+ENST00000420658AFAP1chr47776630-724016424742189571
ENST00000304053NTRK2chr987342874+ENST00000382543AFAP1chr47776630-233116424742189571
ENST00000376208NTRK2chr987342874+ENST00000360265AFAP1chr47776630-724116424742189571
ENST00000376208NTRK2chr987342874+ENST00000358461AFAP1chr47776630-724016424742189571
ENST00000376208NTRK2chr987342874+ENST00000420658AFAP1chr47776630-724016424742189571
ENST00000376208NTRK2chr987342874+ENST00000382543AFAP1chr47776630-233116424742189571
ENST00000277120NTRK2chr987342874+ENST00000360265AFAP1chr47776630-724116424742189571
ENST00000277120NTRK2chr987342874+ENST00000358461AFAP1chr47776630-724016424742189571
ENST00000277120NTRK2chr987342874+ENST00000420658AFAP1chr47776630-724016424742189571
ENST00000277120NTRK2chr987342874+ENST00000382543AFAP1chr47776630-233116424742189571
ENST00000323115NTRK2chr987342874+ENST00000360265AFAP1chr47776630-711115123442059571
ENST00000323115NTRK2chr987342874+ENST00000358461AFAP1chr47776630-711015123442059571
ENST00000323115NTRK2chr987342874+ENST00000420658AFAP1chr47776630-711015123442059571
ENST00000323115NTRK2chr987342874+ENST00000382543AFAP1chr47776630-220115123442059571
ENST00000359847NTRK2chr987342874+ENST00000360265AFAP1chr47776630-68471248801795571
ENST00000359847NTRK2chr987342874+ENST00000358461AFAP1chr47776630-68461248801795571
ENST00000359847NTRK2chr987342874+ENST00000420658AFAP1chr47776630-68461248801795571
ENST00000359847NTRK2chr987342874+ENST00000382543AFAP1chr47776630-19371248801795571
ENST00000395866NTRK2chr987342874+ENST00000360265AFAP1chr47776630-66311032591579506
ENST00000395866NTRK2chr987342874+ENST00000358461AFAP1chr47776630-66301032591579506
ENST00000395866NTRK2chr987342874+ENST00000420658AFAP1chr47776630-66301032591579506
ENST00000395866NTRK2chr987342874+ENST00000382543AFAP1chr47776630-17211032591579506

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000376214ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0008303990.9991696
ENST00000376214ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0008356820.99916434
ENST00000376214ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0008356820.99916434
ENST00000376214ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0127780910.9872219
ENST00000376213ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0008303990.9991696
ENST00000376213ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0008356820.99916434
ENST00000376213ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0008356820.99916434
ENST00000376213ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0127780910.9872219
ENST00000395882ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0007302550.9992698
ENST00000395882ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0007342260.99926573
ENST00000395882ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0007342260.99926573
ENST00000395882ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0127437960.98725617
ENST00000304053ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0006941370.99930584
ENST00000304053ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0006970480.999303
ENST00000304053ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0006970480.999303
ENST00000304053ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0121394190.9878606
ENST00000376208ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0006941370.99930584
ENST00000376208ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0006970480.999303
ENST00000376208ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0006970480.999303
ENST00000376208ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0121394190.9878606
ENST00000277120ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0006941370.99930584
ENST00000277120ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0006970480.999303
ENST00000277120ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0006970480.999303
ENST00000277120ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0121394190.9878606
ENST00000323115ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0006379490.99936205
ENST00000323115ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0006409950.99935895
ENST00000323115ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0006409950.99935895
ENST00000323115ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0110756960.9889243
ENST00000359847ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.000541830.99945813
ENST00000359847ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0005452090.9994548
ENST00000359847ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0005452090.9994548
ENST00000359847ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.008743490.9912565
ENST00000395866ENST00000360265NTRK2chr987342874+AFAP1chr47776630-0.0007219010.9992781
ENST00000395866ENST00000358461NTRK2chr987342874+AFAP1chr47776630-0.0007235170.99927646
ENST00000395866ENST00000420658NTRK2chr987342874+AFAP1chr47776630-0.0007235170.99927646
ENST00000395866ENST00000382543NTRK2chr987342874+AFAP1chr47776630-0.0059893730.9940106

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>60695_60695_1_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000277120_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_2_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000277120_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_3_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000277120_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_4_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000277120_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_5_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000304053_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_6_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000304053_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_7_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000304053_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_8_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000304053_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_9_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000323115_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_10_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000323115_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_11_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000323115_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_12_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000323115_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_13_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000359847_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_14_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000359847_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_15_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000359847_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_16_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000359847_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_17_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376208_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_18_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376208_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_19_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376208_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_20_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376208_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_21_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376213_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_22_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376213_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_23_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376213_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_24_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376213_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_25_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376214_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_26_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376214_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_27_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376214_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_28_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000376214_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_29_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395866_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=506AA_BP=324
MTKITCFLIFIANQKRLEIINEDDVEAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTC
SCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNE
TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICT
KIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNR
LAQLRKERKDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHR

--------------------------------------------------------------

>60695_60695_30_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395866_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=506AA_BP=324
MTKITCFLIFIANQKRLEIINEDDVEAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTC
SCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNE
TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICT
KIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNR
LAQLRKERKDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHR

--------------------------------------------------------------

>60695_60695_31_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395866_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=506AA_BP=324
MTKITCFLIFIANQKRLEIINEDDVEAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTC
SCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNE
TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICT
KIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNR
LAQLRKERKDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHR

--------------------------------------------------------------

>60695_60695_32_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395866_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=506AA_BP=324
MTKITCFLIFIANQKRLEIINEDDVEAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTC
SCDIMWIKTLQEAKSSPDTQDLYCLNESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNE
TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICT
KIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNR
LAQLRKERKDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHR

--------------------------------------------------------------

>60695_60695_33_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395882_AFAP1_chr4_7776630_ENST00000358461_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_34_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395882_AFAP1_chr4_7776630_ENST00000360265_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_35_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395882_AFAP1_chr4_7776630_ENST00000382543_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

>60695_60695_36_NTRK2-AFAP1_NTRK2_chr9_87342874_ENST00000395882_AFAP1_chr4_7776630_ENST00000420658_length(amino acids)=571AA_BP=389
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA

--------------------------------------------------------------

Top

Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:7780489/chr4:87356807)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NTRK2

Q16620

AFAP1

Q8N4X5

FUNCTION: Receptor tyrosine kinase involved in the development and the maturation of the central and the peripheral nervous systems through regulation of neuron survival, proliferation, migration, differentiation, and synapse formation and plasticity (By similarity). Receptor for BDNF/brain-derived neurotrophic factor and NTF4/neurotrophin-4. Alternatively can also bind NTF3/neurotrophin-3 which is less efficient in activating the receptor but regulates neuron survival through NTRK2 (PubMed:7574684, PubMed:15494731). Upon ligand-binding, undergoes homodimerization, autophosphorylation and activation (PubMed:15494731). Recruits, phosphorylates and/or activates several downstream effectors including SHC1, FRS2, SH2B1, SH2B2 and PLCG1 that regulate distinct overlapping signaling cascades. Through SHC1, FRS2, SH2B1, SH2B2 activates the GRB2-Ras-MAPK cascade that regulates for instance neuronal differentiation including neurite outgrowth. Through the same effectors controls the Ras-PI3 kinase-AKT1 signaling cascade that mainly regulates growth and survival. Through PLCG1 and the downstream protein kinase C-regulated pathways controls synaptic plasticity. Thereby, plays a role in learning and memory by regulating both short term synaptic function and long-term potentiation. PLCG1 also leads to NF-Kappa-B activation and the transcription of genes involved in cell survival. Hence, it is able to suppress anoikis, the apoptosis resulting from loss of cell-matrix interactions. May also play a role in neutrophin-dependent calcium signaling in glial cells and mediate communication between neurons and glia. {ECO:0000250|UniProtKB:P15209, ECO:0000269|PubMed:15494731, ECO:0000269|PubMed:7574684}.FUNCTION: May play a role in a signaling cascade by enhancing the kinase activity of SRC. Contributes to SRC-regulated transcription activation. {ECO:0000269|PubMed:17412687}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919148_196386.3333333333333839.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919197_282386.3333333333333839.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919295_365386.3333333333333839.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+91932_61386.3333333333333839.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915148_196386.3333333333333554.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915197_282386.3333333333333554.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915295_365386.3333333333333554.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+91532_61386.3333333333333554.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817148_196386.3333333333333823.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817197_282386.3333333333333823.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817295_365386.3333333333333823.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+81732_61386.3333333333333823.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812148_196386.3333333333333478.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812197_282386.3333333333333478.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812295_365386.3333333333333478.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+81232_61386.3333333333333478.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914148_196386.3333333333333538.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914197_282386.3333333333333538.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914295_365386.3333333333333538.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+91432_61386.3333333333333538.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120148_196386.3333333333333823.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120197_282386.3333333333333823.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120295_365386.3333333333333823.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+112032_61386.3333333333333823.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121148_196386.3333333333333839.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121197_282386.3333333333333839.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121295_365386.3333333333333839.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+112132_61386.3333333333333839.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812148_196230.33333333333334322.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+81232_61230.33333333333334322.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913148_196386.3333333333333478.0DomainNote=LRRCT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913197_282386.3333333333333478.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913295_365386.3333333333333478.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+91332_61386.3333333333333478.0DomainNote=LRRNT
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919116_137386.3333333333333839.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+91992_113386.3333333333333839.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915116_137386.3333333333333554.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+91592_113386.3333333333333554.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817116_137386.3333333333333823.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+81792_113386.3333333333333823.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812116_137386.3333333333333478.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+81292_113386.3333333333333478.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914116_137386.3333333333333538.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+91492_113386.3333333333333538.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120116_137386.3333333333333823.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+112092_113386.3333333333333823.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121116_137386.3333333333333839.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+112192_113386.3333333333333839.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812116_137230.33333333333334322.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+81292_113230.33333333333334322.0RepeatNote=LRR 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913116_137386.3333333333333478.0RepeatNote=LRR 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+91392_113386.3333333333333478.0RepeatNote=LRR 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000003584611217557_648548.3333333333334731.0Coiled coilOntology_term=ECO:0000255
TgeneAFAP1chr9:87342874chr4:7776630ENST000003602651116557_648548.3333333333334731.0Coiled coilOntology_term=ECO:0000255

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919538_807386.3333333333333839.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915538_807386.3333333333333554.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817538_807386.3333333333333823.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812538_807386.3333333333333478.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914538_807386.3333333333333538.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120538_807386.3333333333333823.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121538_807386.3333333333333839.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812197_282230.33333333333334322.0DomainNote=Ig-like C2-type 1
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812295_365230.33333333333334322.0DomainNote=Ig-like C2-type 2
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812538_807230.33333333333334322.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913538_807386.3333333333333478.0DomainProtein kinase
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919544_552386.3333333333333839.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915544_552386.3333333333333554.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817544_552386.3333333333333823.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812544_552386.3333333333333478.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914544_552386.3333333333333538.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120544_552386.3333333333333823.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121544_552386.3333333333333839.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812544_552230.33333333333334322.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913544_552386.3333333333333478.0Nucleotide bindingATP
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+91932_430386.3333333333333839.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919455_822386.3333333333333839.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+91532_430386.3333333333333554.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915455_822386.3333333333333554.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+81732_430386.3333333333333823.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817455_822386.3333333333333823.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+81232_430386.3333333333333478.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812455_822386.3333333333333478.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+91432_430386.3333333333333538.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914455_822386.3333333333333538.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+112032_430386.3333333333333823.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120455_822386.3333333333333823.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+112132_430386.3333333333333839.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121455_822386.3333333333333839.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+81232_430230.33333333333334322.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812455_822230.33333333333334322.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+91332_430386.3333333333333478.0Topological domainExtracellular
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913455_822386.3333333333333478.0Topological domainCytoplasmic
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919431_454386.3333333333333839.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915431_454386.3333333333333554.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817431_454386.3333333333333823.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812431_454386.3333333333333478.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914431_454386.3333333333333538.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120431_454386.3333333333333823.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121431_454386.3333333333333839.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812431_454230.33333333333334322.0TransmembraneHelical
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913431_454386.3333333333333478.0TransmembraneHelical
TgeneAFAP1chr9:87342874chr4:7776630ENST000003825431217557_648632.3333333333334815.0Coiled coilOntology_term=ECO:0000255
TgeneAFAP1chr9:87342874chr4:7776630ENST000004206581318557_648632.3333333333334815.0Coiled coilOntology_term=ECO:0000255
TgeneAFAP1chr9:87342874chr4:7776630ENST00000358461121760_106548.3333333333334731.0Compositional biasNote=Pro-rich
TgeneAFAP1chr9:87342874chr4:7776630ENST00000360265111660_106548.3333333333334731.0Compositional biasNote=Pro-rich
TgeneAFAP1chr9:87342874chr4:7776630ENST00000382543121760_106632.3333333333334815.0Compositional biasNote=Pro-rich
TgeneAFAP1chr9:87342874chr4:7776630ENST00000420658131860_106632.3333333333334815.0Compositional biasNote=Pro-rich
TgeneAFAP1chr9:87342874chr4:7776630ENST000003584611217153_249548.3333333333334731.0DomainPH 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000003584611217347_441548.3333333333334731.0DomainPH 2
TgeneAFAP1chr9:87342874chr4:7776630ENST000003602651116153_249548.3333333333334731.0DomainPH 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000003602651116347_441548.3333333333334731.0DomainPH 2
TgeneAFAP1chr9:87342874chr4:7776630ENST000003825431217153_249632.3333333333334815.0DomainPH 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000003825431217347_441632.3333333333334815.0DomainPH 2
TgeneAFAP1chr9:87342874chr4:7776630ENST000004206581318153_249632.3333333333334815.0DomainPH 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000004206581318347_441632.3333333333334815.0DomainPH 2
TgeneAFAP1chr9:87342874chr4:7776630ENST000003584611217451_456548.3333333333334731.0MotifSH2-binding 2
TgeneAFAP1chr9:87342874chr4:7776630ENST00000358461121771_74548.3333333333334731.0MotifSH3-binding
TgeneAFAP1chr9:87342874chr4:7776630ENST00000358461121794_97548.3333333333334731.0MotifSH2-binding 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000003602651116451_456548.3333333333334731.0MotifSH2-binding 2
TgeneAFAP1chr9:87342874chr4:7776630ENST00000360265111671_74548.3333333333334731.0MotifSH3-binding
TgeneAFAP1chr9:87342874chr4:7776630ENST00000360265111694_97548.3333333333334731.0MotifSH2-binding 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000003825431217451_456632.3333333333334815.0MotifSH2-binding 2
TgeneAFAP1chr9:87342874chr4:7776630ENST00000382543121771_74632.3333333333334815.0MotifSH3-binding
TgeneAFAP1chr9:87342874chr4:7776630ENST00000382543121794_97632.3333333333334815.0MotifSH2-binding 1
TgeneAFAP1chr9:87342874chr4:7776630ENST000004206581318451_456632.3333333333334815.0MotifSH2-binding 2
TgeneAFAP1chr9:87342874chr4:7776630ENST00000420658131871_74632.3333333333334815.0MotifSH3-binding
TgeneAFAP1chr9:87342874chr4:7776630ENST00000420658131894_97632.3333333333334815.0MotifSH2-binding 1


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Fusion Protein Structures

check button PDB and CIF files of the predicted fusion proteins
* Here we show the 3D structure of the fusion proteins using Mol*. AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Model confidence is shown from the pLDDT values per residue. pLDDT corresponds to the model’s prediction of its score on the local Distance Difference Test. It is a measure of local accuracy (from AlphfaFold website). To color code individual residues, we transformed individual PDB files into CIF format.
Fusion protein PDB link (fusion AA seq ID in FusionPDB)HgeneHchrHbpHstrandTgeneTchrTbpTstrandAA seqLen(AA seq)
PDB file >>>1225_NTRK2_87342874_AFAP1_7776630_1225_NTRK2_87342874_AFAP1_7776630_ranked_0.pdbNTRK28734287487342874ENST00000382543AFAP1chr47776630-
MLGMSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIWCSDPSPGIVAFPRLEPNSVDPENITEIFIANQKRLEIINEDDV
EAYVGLRNLTIVDSGLKFVAHKAFLKNSNLQHINFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQEAKSSPDTQDLYCL
NESSKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWDVGNLVSKHMNETSHTQGSLRITNISSDDSGKQISCV
AENLVGEDQDSVNLTVHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG
DYTLIAKNEYGKDEKQISAHFMGWPGIDDDAAQYKYGKNRVEADAKRLQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQA
ILEEKLKQLEEECRQKEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPISSCDTSDTEGPVPVNSAA
571


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pLDDT score distribution

check button pLDDT score distribution of the predicted wild-type structures of two partner proteins from AlphaFold2
* AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100.
NTRK2_pLDDT.png
all structure
all structure
AFAP1_pLDDT.png
all structure
all structure

check button pLDDT score distribution of the predicted fusion protein structures from AlphaFold2
* AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100.
all structure


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Ramachandran Plot of Fusion Protein Structure


check button Ramachandran plot of the torsional angles - phi (φ)and psi (ψ) - of the residues (amino acids) contained in this fusion protein peptide.
Fusion AA seq ID in FusionPDB and their Ramachandran plots

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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
NTRK2all structure
AFAP1


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
HgeneNTRK2chr9:87342874chr4:7776630ENST00000277120+919455_466386.3333333333333839.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000304053+915455_466386.3333333333333554.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000323115+817455_466386.3333333333333823.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000359847+812455_466386.3333333333333478.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376208+914455_466386.3333333333333538.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376213+1120455_466386.3333333333333823.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000376214+1121455_466386.3333333333333839.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395866+812455_466230.33333333333334322.0MAPK8IP3/JIP3
HgeneNTRK2chr9:87342874chr4:7776630ENST00000395882+913455_466386.3333333333333478.0MAPK8IP3/JIP3
TgeneAFAP1chr9:87342874chr4:7776630ENST000003825431217594_637632.3333333333334815.0F-actin
TgeneAFAP1chr9:87342874chr4:7776630ENST000004206581318594_637632.3333333333334815.0F-actin


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Related Drugs to NTRK2-AFAP1


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to NTRK2-AFAP1


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneNTRK2C0011570Mental Depression5PSYGENET
HgeneNTRK2C0011581Depressive disorder5PSYGENET
HgeneNTRK2C0041696Unipolar Depression5PSYGENET
HgeneNTRK2C0525045Mood Disorders5PSYGENET
HgeneNTRK2C1269683Major Depressive Disorder5PSYGENET
HgeneNTRK2C3151303Obesity, Hyperphagia, and Developmental Delay4CTD_human;GENOMICS_ENGLAND;UNIPROT
HgeneNTRK2C0005586Bipolar Disorder3CTD_human;PSYGENET
HgeneNTRK2C4693367EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 583GENOMICS_ENGLAND;UNIPROT
HgeneNTRK2C0009171Cocaine Abuse2CTD_human
HgeneNTRK2C0036341Schizophrenia2PSYGENET
HgeneNTRK2C0038220Status Epilepticus2CTD_human
HgeneNTRK2C0236736Cocaine-Related Disorders2CTD_human
HgeneNTRK2C0270823Petit mal status2CTD_human
HgeneNTRK2C0311335Grand Mal Status Epilepticus2CTD_human
HgeneNTRK2C0393734Complex Partial Status Epilepticus2CTD_human
HgeneNTRK2C0600427Cocaine Dependence2CTD_human
HgeneNTRK2C0751217Hyperkinesia, Generalized2CTD_human
HgeneNTRK2C0751522Status Epilepticus, Subclinical2CTD_human
HgeneNTRK2C0751523Non-Convulsive Status Epilepticus2CTD_human
HgeneNTRK2C0751524Simple Partial Status Epilepticus2CTD_human
HgeneNTRK2C3887506Hyperkinesia2CTD_human
HgeneNTRK2C0001973Alcoholic Intoxication, Chronic1PSYGENET
HgeneNTRK2C0004114Astrocytoma1CTD_human
HgeneNTRK2C0004352Autistic Disorder1CTD_human
HgeneNTRK2C0005587Depression, Bipolar1CTD_human
HgeneNTRK2C0008073Developmental Disabilities1CTD_human
HgeneNTRK2C0013415Dysthymic Disorder1PSYGENET
HgeneNTRK2C0017638Glioma1CTD_human
HgeneNTRK2C0020505Hyperphagia1CTD_human
HgeneNTRK2C0024713Manic Disorder1CTD_human
HgeneNTRK2C0027819Neuroblastoma1CTD_human
HgeneNTRK2C0028754Obesity1CTD_human
HgeneNTRK2C0036349Paranoid Schizophrenia1PSYGENET
HgeneNTRK2C0037769West Syndrome1ORPHANET
HgeneNTRK2C0085996Child Development Deviations1CTD_human
HgeneNTRK2C0085997Child Development Disorders, Specific1CTD_human
HgeneNTRK2C0205768Subependymal Giant Cell Astrocytoma1CTD_human
HgeneNTRK2C0259783mixed gliomas1CTD_human
HgeneNTRK2C0280783Juvenile Pilocytic Astrocytoma1CTD_human
HgeneNTRK2C0280785Diffuse Astrocytoma1CTD_human
HgeneNTRK2C0334579Anaplastic astrocytoma1CTD_human
HgeneNTRK2C0334580Protoplasmic astrocytoma1CTD_human
HgeneNTRK2C0334581Gemistocytic astrocytoma1CTD_human
HgeneNTRK2C0334582Fibrillary Astrocytoma1CTD_human
HgeneNTRK2C0334583Pilocytic Astrocytoma1CTD_human
HgeneNTRK2C0338070Childhood Cerebral Astrocytoma1CTD_human
HgeneNTRK2C0338831Manic1CTD_human
HgeneNTRK2C0547065Mixed oligoastrocytoma1CTD_human
HgeneNTRK2C0555198Malignant Glioma1CTD_human
HgeneNTRK2C0678807prenatal alcohol exposure1PSYGENET
HgeneNTRK2C0750935Cerebral Astrocytoma1CTD_human
HgeneNTRK2C0750936Intracranial Astrocytoma1CTD_human
HgeneNTRK2C0752347Lewy Body Disease1CTD_human
HgeneNTRK2C1519086Pilomyxoid astrocytoma1ORPHANET
HgeneNTRK2C1704230Grade I Astrocytoma1CTD_human
HgeneNTRK2C3146244Alcohol Related Birth Defect1PSYGENET