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Fusion Protein:PARK2-SOS2 |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: PARK2-SOS2 | FusionPDB ID: 62762 | FusionGDB2.0 ID: 62762 | Hgene | Tgene | Gene symbol | PARK2 | SOS2 | Gene ID | 5071 | 6655 |
| Gene name | parkin RBR E3 ubiquitin protein ligase | SOS Ras/Rho guanine nucleotide exchange factor 2 | |
| Synonyms | AR-JP|LPRS2|PARK2|PDJ | NS9|SOS-2 | |
| Cytomap | 6q26 | 14q21.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | E3 ubiquitin-protein ligase parkinParkinson disease (autosomal recessive, juvenile) 2, parkinparkinson juvenile disease protein 2parkinson protein 2 E3 ubiquitin protein ligaseparkinson protein 2, E3 ubiquitin protein ligase (parkin) | son of sevenless homolog 2guanine nucleotide releasing factor | |
| Modification date | 20200329 | 20200327 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000338468, ENST00000366892, ENST00000366894, ENST00000366896, ENST00000366897, ENST00000366898, | ENST00000555794, ENST00000216373, ENST00000543680, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 20 X 15 X 7=2100 | 13 X 13 X 9=1521 |
| # samples | 21 | 17 | |
| ** MAII score | log2(21/2100*10)=-3.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(17/1521*10)=-3.16141350158679 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: PARK2 [Title/Abstract] AND SOS2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | PARK2(162394333)-SOS2(50587102), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | PARK2-SOS2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PARK2-SOS2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PARK2-SOS2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PARK2-SOS2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PARK2-SOS2 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. PARK2-SOS2 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PARK2 | GO:0000209 | protein polyubiquitination | 12150907|16227987|18541373|19880420 |
| Hgene | PARK2 | GO:0000422 | autophagy of mitochondrion | 25621951 |
| Hgene | PARK2 | GO:0001933 | negative regulation of protein phosphorylation | 17512523 |
| Hgene | PARK2 | GO:0006511 | ubiquitin-dependent protein catabolic process | 12925569|17097639 |
| Hgene | PARK2 | GO:0006513 | protein monoubiquitination | 20889974 |
| Hgene | PARK2 | GO:0010506 | regulation of autophagy | 20889974 |
| Hgene | PARK2 | GO:0010821 | regulation of mitochondrion organization | 21113145 |
| Hgene | PARK2 | GO:0016567 | protein ubiquitination | 10973942|11439185|12628165|17314283 |
| Hgene | PARK2 | GO:0031648 | protein destabilization | 19591802|29311685 |
| Hgene | PARK2 | GO:0032232 | negative regulation of actin filament bundle assembly | 17512523 |
| Hgene | PARK2 | GO:0033132 | negative regulation of glucokinase activity | 24187134 |
| Hgene | PARK2 | GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling | 17314283|19880420 |
| Hgene | PARK2 | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 11439185|21376232 |
| Hgene | PARK2 | GO:0043388 | positive regulation of DNA binding | 17314283 |
| Hgene | PARK2 | GO:0043524 | negative regulation of neuron apoptotic process | 12628165|22511790|23985028 |
| Hgene | PARK2 | GO:0044828 | negative regulation by host of viral genome replication | 25244949 |
| Hgene | PARK2 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 23453807 |
| Hgene | PARK2 | GO:0046676 | negative regulation of insulin secretion | 24187134 |
| Hgene | PARK2 | GO:0051865 | protein autoubiquitination | 12628165|15728840|16352719|17512523 |
| Hgene | PARK2 | GO:0060548 | negative regulation of cell death | 15603737 |
| Hgene | PARK2 | GO:0061734 | parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization | 19029340 |
| Hgene | PARK2 | GO:0070534 | protein K63-linked ubiquitination | 15728840|17314283|19880420|25621951 |
| Hgene | PARK2 | GO:0070936 | protein K48-linked ubiquitination | 21376232|23858059 |
| Hgene | PARK2 | GO:0070979 | protein K11-linked ubiquitination | 25621951 |
| Hgene | PARK2 | GO:0085020 | protein K6-linked ubiquitination | 25621951 |
| Hgene | PARK2 | GO:0090090 | negative regulation of canonical Wnt signaling pathway | 19591802 |
| Hgene | PARK2 | GO:0090201 | negative regulation of release of cytochrome c from mitochondria | 19880420|23453807 |
| Hgene | PARK2 | GO:0098779 | positive regulation of mitophagy in response to mitochondrial depolarization | 20457763 |
| Hgene | PARK2 | GO:0099074 | mitochondrion to lysosome transport | 24446486 |
| Hgene | PARK2 | GO:1900407 | regulation of cellular response to oxidative stress | 24446486 |
| Hgene | PARK2 | GO:1902236 | negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway | 11439185|12150907|23453807 |
| Hgene | PARK2 | GO:1903265 | positive regulation of tumor necrosis factor-mediated signaling pathway | 23453807 |
| Hgene | PARK2 | GO:1903377 | negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway | 17314283 |
| Hgene | PARK2 | GO:1903599 | positive regulation of autophagy of mitochondrion | 26310625 |
| Fusion gene breakpoints across PARK2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across SOS2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | STAD | TCGA-BR-7851 | PARK2 | chr6 | 162394333 | - | SOS2 | chr14 | 50587102 | - |
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Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000366894 | PARK2 | chr6 | 162394333 | - | ENST00000216373 | SOS2 | chr14 | 50587102 | - | 2328 | 493 | 543 | 1112 | 189 |
| ENST00000366894 | PARK2 | chr6 | 162394333 | - | ENST00000543680 | SOS2 | chr14 | 50587102 | - | 1147 | 493 | 543 | 1112 | 189 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000366894 | ENST00000216373 | PARK2 | chr6 | 162394333 | - | SOS2 | chr14 | 50587102 | - | 0.026686063 | 0.97331387 |
| ENST00000366894 | ENST00000543680 | PARK2 | chr6 | 162394333 | - | SOS2 | chr14 | 50587102 | - | 0.013804334 | 0.9861957 |
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Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >62762_62762_1_PARK2-SOS2_PARK2_chr6_162394333_ENST00000366894_SOS2_chr14_50587102_ENST00000216373_length(amino acids)=189AA_BP= MIPPPLPPRKKFDHDASNSKGNMKSDDDPPAIPPRQPPPPKVKPRVPVPTGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFN LQPPPLGHLHRDSDWLRDISTCPNSPSTPPSTPSPRVPRRCYVLSSSQNNLAHPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLP -------------------------------------------------------------- >62762_62762_2_PARK2-SOS2_PARK2_chr6_162394333_ENST00000366894_SOS2_chr14_50587102_ENST00000543680_length(amino acids)=189AA_BP= MIPPPLPPRKKFDHDASNSKGNMKSDDDPPAIPPRQPPPPKVKPRVPVPTGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFN LQPPPLGHLHRDSDWLRDISTCPNSPSTPPSTPSPRVPRRCYVLSSSQNNLAHPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLP -------------------------------------------------------------- |
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Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:162394333/chr14:50587102) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 1_76 | 95.66666666666667 | 317.0 | Domain | Ubiquitin-like |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 1_76 | 216.66666666666666 | 438.0 | Domain | Ubiquitin-like |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 1_76 | 244.66666666666666 | 466.0 | Domain | Ubiquitin-like |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 204_238 | 244.66666666666666 | 466.0 | Region | SYT11 binding 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 77_237 | 244.66666666666666 | 466.0 | Region | Necessary for PINK1-dependent localization to mitochondria |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 141_225 | 244.66666666666666 | 466.0 | Zinc finger | Note=RING-type 0%3B atypical |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 1180_1183 | 1126.3333333333333 | 1333.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 1203_1208 | 1126.3333333333333 | 1333.0 | Compositional bias | Note=Poly-Pro |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 1_76 | 53.666666666666664 | 275.0 | Domain | Ubiquitin-like |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 1_76 | 53.666666666666664 | 275.0 | Domain | Ubiquitin-like |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 204_238 | 53.666666666666664 | 275.0 | Region | SYT11 binding 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 234_465 | 53.666666666666664 | 275.0 | Region | TRIAD supradomain |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 257_293 | 53.666666666666664 | 275.0 | Region | SYT11 binding 2 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 378_410 | 53.666666666666664 | 275.0 | Region | REP |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 77_237 | 53.666666666666664 | 275.0 | Region | Necessary for PINK1-dependent localization to mitochondria |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 204_238 | 53.666666666666664 | 275.0 | Region | SYT11 binding 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 234_465 | 53.666666666666664 | 275.0 | Region | TRIAD supradomain |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 257_293 | 53.666666666666664 | 275.0 | Region | SYT11 binding 2 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 378_410 | 53.666666666666664 | 275.0 | Region | REP |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 77_237 | 53.666666666666664 | 275.0 | Region | Necessary for PINK1-dependent localization to mitochondria |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 204_238 | 95.66666666666667 | 317.0 | Region | SYT11 binding 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 234_465 | 95.66666666666667 | 317.0 | Region | TRIAD supradomain |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 257_293 | 95.66666666666667 | 317.0 | Region | SYT11 binding 2 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 378_410 | 95.66666666666667 | 317.0 | Region | REP |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 77_237 | 95.66666666666667 | 317.0 | Region | Necessary for PINK1-dependent localization to mitochondria |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 204_238 | 216.66666666666666 | 438.0 | Region | SYT11 binding 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 234_465 | 216.66666666666666 | 438.0 | Region | TRIAD supradomain |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 257_293 | 216.66666666666666 | 438.0 | Region | SYT11 binding 2 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 378_410 | 216.66666666666666 | 438.0 | Region | REP |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 77_237 | 216.66666666666666 | 438.0 | Region | Necessary for PINK1-dependent localization to mitochondria |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 234_465 | 244.66666666666666 | 466.0 | Region | TRIAD supradomain |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 257_293 | 244.66666666666666 | 466.0 | Region | SYT11 binding 2 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 378_410 | 244.66666666666666 | 466.0 | Region | REP |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 141_225 | 53.666666666666664 | 275.0 | Zinc finger | Note=RING-type 0%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 238_293 | 53.666666666666664 | 275.0 | Zinc finger | RING-type 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 313_377 | 53.666666666666664 | 275.0 | Zinc finger | IBR-type |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000338468 | - | 5 | 11 | 418_449 | 53.666666666666664 | 275.0 | Zinc finger | RING-type 2%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 141_225 | 53.666666666666664 | 275.0 | Zinc finger | Note=RING-type 0%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 238_293 | 53.666666666666664 | 275.0 | Zinc finger | RING-type 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 313_377 | 53.666666666666664 | 275.0 | Zinc finger | IBR-type |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366894 | - | 5 | 11 | 418_449 | 53.666666666666664 | 275.0 | Zinc finger | RING-type 2%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 141_225 | 95.66666666666667 | 317.0 | Zinc finger | Note=RING-type 0%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 238_293 | 95.66666666666667 | 317.0 | Zinc finger | RING-type 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 313_377 | 95.66666666666667 | 317.0 | Zinc finger | IBR-type |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366896 | - | 3 | 9 | 418_449 | 95.66666666666667 | 317.0 | Zinc finger | RING-type 2%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 141_225 | 216.66666666666666 | 438.0 | Zinc finger | Note=RING-type 0%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 238_293 | 216.66666666666666 | 438.0 | Zinc finger | RING-type 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 313_377 | 216.66666666666666 | 438.0 | Zinc finger | IBR-type |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366897 | - | 5 | 11 | 418_449 | 216.66666666666666 | 438.0 | Zinc finger | RING-type 2%3B atypical |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 238_293 | 244.66666666666666 | 466.0 | Zinc finger | RING-type 1 |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 313_377 | 244.66666666666666 | 466.0 | Zinc finger | IBR-type |
| Hgene | PARK2 | chr6:162394333 | chr14:50587102 | ENST00000366898 | - | 6 | 12 | 418_449 | 244.66666666666666 | 466.0 | Zinc finger | RING-type 2%3B atypical |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 755_758 | 1126.3333333333333 | 1333.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 198_388 | 1126.3333333333333 | 1333.0 | Domain | DH | |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 442_546 | 1126.3333333333333 | 1333.0 | Domain | PH | |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 595_739 | 1126.3333333333333 | 1333.0 | Domain | N-terminal Ras-GEF | |
| Tgene | SOS2 | chr6:162394333 | chr14:50587102 | ENST00000216373 | 20 | 23 | 778_1017 | 1126.3333333333333 | 1333.0 | Domain | Ras-GEF |
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Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| PARK2 | |
| SOS2 |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs to PARK2-SOS2 |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to PARK2-SOS2 |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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