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Fusion Protein:ATXN10-FBLN1 |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: ATXN10-FBLN1 | FusionPDB ID: 8370 | FusionGDB2.0 ID: 8370 | Hgene | Tgene | Gene symbol | ATXN10 | FBLN1 | Gene ID | 25814 | 2192 |
| Gene name | ataxin 10 | fibulin 1 | |
| Synonyms | E46L|HUMEEP|SCA10 | FBLN|FIBL1 | |
| Cytomap | 22q13.31 | 22q13.31 | |
| Type of gene | protein-coding | protein-coding | |
| Description | ataxin-10brain protein E46 homologspinocerebellar ataxia type 10 protein | fibulin-1 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | Q9UBB4 | P23142 | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000498009, ENST00000252934, ENST00000381061, ENST00000402380, | ENST00000262722, ENST00000327858, ENST00000340923, ENST00000348697, ENST00000402984, ENST00000442170, ENST00000476366, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 16 X 12 X 11=2112 | 22 X 22 X 9=4356 |
| # samples | 19 | 27 | |
| ** MAII score | log2(19/2112*10)=-3.47453851102751 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(27/4356*10)=-4.01197264166608 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: ATXN10 [Title/Abstract] AND FBLN1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | ATXN10(46088958)-FBLN1(45996187), # samples:2 FBLN1(45914667)-ATXN10(46134611), # samples:1 FBLN1(45931217)-ATXN10(46202839), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | ATXN10-FBLN1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATXN10-FBLN1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATXN10-FBLN1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ATXN10-FBLN1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ATXN10-FBLN1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. ATXN10-FBLN1 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. FBLN1-ATXN10 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. FBLN1-ATXN10 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | ATXN10 | GO:0031175 | neuron projection development | 16498633 |
| Tgene | FBLN1 | GO:0001933 | negative regulation of protein phosphorylation | 11792823 |
| Tgene | FBLN1 | GO:0007162 | negative regulation of cell adhesion | 11792823 |
| Tgene | FBLN1 | GO:0007229 | integrin-mediated signaling pathway | 11792823 |
| Tgene | FBLN1 | GO:0070373 | negative regulation of ERK1 and ERK2 cascade | 11792823 |
| Tgene | FBLN1 | GO:0072378 | blood coagulation, fibrin clot formation | 7642629 |
| Tgene | FBLN1 | GO:1900025 | negative regulation of substrate adhesion-dependent cell spreading | 11792823 |
| Tgene | FBLN1 | GO:2000146 | negative regulation of cell motility | 11792823 |
| Tgene | FBLN1 | GO:2000647 | negative regulation of stem cell proliferation | 11238726 |
| Fusion gene breakpoints across ATXN10 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across FBLN1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | OV | TCGA-13-0795-01A | ATXN10 | chr22 | 46085783 | + | FBLN1 | chr22 | 45996187 | + |
| ChimerDB4 | OV | TCGA-13-0795-01A | ATXN10 | chr22 | 46088958 | - | FBLN1 | chr22 | 45996187 | + |
| ChimerDB4 | OV | TCGA-13-0795-01A | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45996187 | + |
| ChimerDB4 | UCEC | TCGA-AX-A1CC-01A | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + |
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Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000381061 | ATXN10 | chr22 | 46088958 | + | ENST00000348697 | FBLN1 | chr22 | 45914562 | + | 3186 | 465 | 266 | 2497 | 743 |
| ENST00000381061 | ATXN10 | chr22 | 46088958 | + | ENST00000402984 | FBLN1 | chr22 | 45914562 | + | 2638 | 465 | 266 | 2551 | 761 |
| ENST00000381061 | ATXN10 | chr22 | 46088958 | + | ENST00000262722 | FBLN1 | chr22 | 45914562 | + | 2534 | 465 | 266 | 2437 | 723 |
| ENST00000381061 | ATXN10 | chr22 | 46088958 | + | ENST00000327858 | FBLN1 | chr22 | 45914562 | + | 3187 | 465 | 266 | 2497 | 743 |
| ENST00000381061 | ATXN10 | chr22 | 46088958 | + | ENST00000442170 | FBLN1 | chr22 | 45914562 | + | 2901 | 465 | 266 | 2191 | 641 |
| ENST00000381061 | ATXN10 | chr22 | 46088958 | + | ENST00000340923 | FBLN1 | chr22 | 45914562 | + | 2724 | 465 | 266 | 2086 | 606 |
| ENST00000252934 | ATXN10 | chr22 | 46088958 | + | ENST00000348697 | FBLN1 | chr22 | 45914562 | + | 3377 | 656 | 265 | 2688 | 807 |
| ENST00000252934 | ATXN10 | chr22 | 46088958 | + | ENST00000402984 | FBLN1 | chr22 | 45914562 | + | 2829 | 656 | 265 | 2742 | 825 |
| ENST00000252934 | ATXN10 | chr22 | 46088958 | + | ENST00000262722 | FBLN1 | chr22 | 45914562 | + | 2725 | 656 | 265 | 2628 | 787 |
| ENST00000252934 | ATXN10 | chr22 | 46088958 | + | ENST00000327858 | FBLN1 | chr22 | 45914562 | + | 3378 | 656 | 265 | 2688 | 807 |
| ENST00000252934 | ATXN10 | chr22 | 46088958 | + | ENST00000442170 | FBLN1 | chr22 | 45914562 | + | 3092 | 656 | 265 | 2382 | 705 |
| ENST00000252934 | ATXN10 | chr22 | 46088958 | + | ENST00000340923 | FBLN1 | chr22 | 45914562 | + | 2915 | 656 | 265 | 2277 | 670 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000381061 | ENST00000348697 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.008751115 | 0.99124885 |
| ENST00000381061 | ENST00000402984 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.012989094 | 0.98701096 |
| ENST00000381061 | ENST00000262722 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.016154366 | 0.9838456 |
| ENST00000381061 | ENST00000327858 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.009039113 | 0.9909609 |
| ENST00000381061 | ENST00000442170 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.018976394 | 0.98102355 |
| ENST00000381061 | ENST00000340923 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.018633857 | 0.98136616 |
| ENST00000252934 | ENST00000348697 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.007049251 | 0.9929508 |
| ENST00000252934 | ENST00000402984 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.007884854 | 0.9921151 |
| ENST00000252934 | ENST00000262722 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.012414482 | 0.98758554 |
| ENST00000252934 | ENST00000327858 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.00733078 | 0.9926692 |
| ENST00000252934 | ENST00000442170 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.016162122 | 0.98383784 |
| ENST00000252934 | ENST00000340923 | ATXN10 | chr22 | 46088958 | + | FBLN1 | chr22 | 45914562 | + | 0.017211815 | 0.98278815 |
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Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >8370_8370_1_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000252934_FBLN1_chr22_45914562_ENST00000262722_length(amino acids)=787AA_BP=129 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPRTIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRN ACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEEL HCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIE VEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTE DNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYH LNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDG RSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDI DECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATRCERLPCHENRECSKLPLRITYYHLSFPTNIQAPAVVFRMGPSSAVPGDS -------------------------------------------------------------- >8370_8370_2_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000252934_FBLN1_chr22_45914562_ENST00000327858_length(amino acids)=807AA_BP=129 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPRTIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRN ACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEEL HCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIE VEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTE DNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYH LNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDG RSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDI DECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATLQQEKTDTVRCIKSCRPNDVTCVFDPVHTISHTVISLPTFREFTRPEEII -------------------------------------------------------------- >8370_8370_3_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000252934_FBLN1_chr22_45914562_ENST00000340923_length(amino acids)=670AA_BP=129 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPRTIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRN ACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEEL HCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIE VEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTE DNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYH LNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDG RSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDI -------------------------------------------------------------- >8370_8370_4_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000252934_FBLN1_chr22_45914562_ENST00000348697_length(amino acids)=807AA_BP=129 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPRTIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRN ACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEEL HCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIE VEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTE DNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYH LNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDG RSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDI DECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATQKSKKGRQNTPAGSSKEDCRVLPWKQGLEDTHLDAYLPCCRRFTRPEEII -------------------------------------------------------------- >8370_8370_5_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000252934_FBLN1_chr22_45914562_ENST00000402984_length(amino acids)=825AA_BP=129 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPRTIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRN ACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDCSLPYATESKECRAVGLASLCQDLNGA WAVWKVGRASQAEGTASARAQRRGMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEY SLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVN ECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCID INECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCV DVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALP TGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATRCERLPCHENRE CSKLPLRITYYHLSFPTNIQAPAVVFRMGPSSAVPGDSMQLAITGGNEEGFFTTRKVSPHSGVVALTKPVPEPRDLLLTVKMDLSRHGTV -------------------------------------------------------------- >8370_8370_6_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000252934_FBLN1_chr22_45914562_ENST00000442170_length(amino acids)=705AA_BP=129 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRETAPRTIFQRVLDILKKSSHAVELACRDPSQVENLASSLQLITECFRCLRN ACIECSVNQNSIRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEEL HCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIE VEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTE DNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYH LNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDG RSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDI -------------------------------------------------------------- >8370_8370_7_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000381061_FBLN1_chr22_45914562_ENST00000262722_length(amino acids)=723AA_BP=65 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDC SLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVF QACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLG ESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCP IGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRL CGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCIN IPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATRCERLPCHENRECSKLPLRITYYH LSFPTNIQAPAVVFRMGPSSAVPGDSMQLAITGGNEEGFFTTRKVSPHSGVVALTKPVPEPRDLLLTVKMDLSRHGTVSSFVAKLFIFVS -------------------------------------------------------------- >8370_8370_8_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000381061_FBLN1_chr22_45914562_ENST00000327858_length(amino acids)=743AA_BP=65 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDC SLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVF QACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLG ESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCP IGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRL CGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCIN IPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATLQQEKTDTVRCIKSCRPNDVTCVF DPVHTISHTVISLPTFREFTRPEEIIFLRAITPPHPASQANIIFDITEGNLRDSFDIIKRYMDGMTVGVVRQVRPIVGPFHAVLKLEMNY -------------------------------------------------------------- >8370_8370_9_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000381061_FBLN1_chr22_45914562_ENST00000340923_length(amino acids)=606AA_BP=65 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDC SLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVF QACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLG ESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCP IGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRL CGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCIN -------------------------------------------------------------- >8370_8370_10_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000381061_FBLN1_chr22_45914562_ENST00000348697_length(amino acids)=743AA_BP=65 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDC SLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVF QACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLG ESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCP IGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRL CGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCIN IPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATQKSKKGRQNTPAGSSKEDCRVLPW KQGLEDTHLDAYLPCCRRFTRPEEIIFLRAITPPHPASQANIIFDITEGNLRDSFDIIKRYMDGMTVGVVRQVRPIVGPFHAVLKLEMNY -------------------------------------------------------------- >8370_8370_11_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000381061_FBLN1_chr22_45914562_ENST00000402984_length(amino acids)=761AA_BP=65 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDC SLPYATESKECRAVGLASLCQDLNGAWAVWKVGRASQAEGTASARAQRRGMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLE ATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRD TGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNT LGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPIGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHR CVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQ CYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCL AFECPENYRRSAATRCERLPCHENRECSKLPLRITYYHLSFPTNIQAPAVVFRMGPSSAVPGDSMQLAITGGNEEGFFTTRKVSPHSGVV -------------------------------------------------------------- >8370_8370_12_ATXN10-FBLN1_ATXN10_chr22_46088958_ENST00000381061_FBLN1_chr22_45914562_ENST00000442170_length(amino acids)=641AA_BP=65 MAAPRPPPARLSGVMVPAPIQDLEALRALTALFKEQRNRNLDTIGVAVDLILLFRELRVEQESLLTVDADVLLEACCADGHRMATHQKDC SLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVF QACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLG ESCINTVGSFRCQRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCP IGHTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRL CGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCIN IPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGGFRCLAFECPENYRRSAATQKSKKGRQNTPAGSSKEDCRVLPW -------------------------------------------------------------- |
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Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr22:46088958/chr22:45996187) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ATXN10 | FBLN1 |
| FUNCTION: Necessary for the survival of cerebellar neurons. Induces neuritogenesis by activating the Ras-MAP kinase pathway. May play a role in the maintenance of a critical intracellular glycosylation level and homeostasis. {ECO:0000250}. | FUNCTION: Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. Has been implicated in a role in cellular transformation and tumor invasion, it appears to be a tumor suppressor. May play a role in haemostasis and thrombosis owing to its ability to bind fibrinogen and incorporate into clots. Could play a significant role in modulating the neurotrophic activities of APP, particularly soluble APP. {ECO:0000269|PubMed:11792823, ECO:0000269|PubMed:9393974, ECO:0000269|PubMed:9466671}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 112_144 | 0 | 684.0 | Domain | Anaphylatoxin-like 3 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 176_215 | 0 | 684.0 | Domain | EGF-like 1 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 216_261 | 0 | 684.0 | Domain | EGF-like 2%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 262_307 | 0 | 684.0 | Domain | EGF-like 3%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 308_355 | 0 | 684.0 | Domain | EGF-like 4%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 356_398 | 0 | 684.0 | Domain | EGF-like 5%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 36_76 | 0 | 684.0 | Domain | Anaphylatoxin-like 1 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 399_440 | 0 | 684.0 | Domain | EGF-like 6%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 441_480 | 0 | 684.0 | Domain | EGF-like 7%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 481_524 | 0 | 684.0 | Domain | EGF-like 8%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 525_578 | 0 | 684.0 | Domain | EGF-like 9%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 77_111 | 0 | 684.0 | Domain | Anaphylatoxin-like 2 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 112_144 | 0 | 567.0 | Domain | Anaphylatoxin-like 3 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 176_215 | 0 | 567.0 | Domain | EGF-like 1 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 216_261 | 0 | 567.0 | Domain | EGF-like 2%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 262_307 | 0 | 567.0 | Domain | EGF-like 3%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 308_355 | 0 | 567.0 | Domain | EGF-like 4%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 356_398 | 0 | 567.0 | Domain | EGF-like 5%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 36_76 | 0 | 567.0 | Domain | Anaphylatoxin-like 1 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 399_440 | 0 | 567.0 | Domain | EGF-like 6%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 441_480 | 0 | 567.0 | Domain | EGF-like 7%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 481_524 | 0 | 567.0 | Domain | EGF-like 8%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 525_578 | 0 | 567.0 | Domain | EGF-like 9%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 77_111 | 0 | 567.0 | Domain | Anaphylatoxin-like 2 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 112_144 | 26.333333333333332 | 684.0 | Domain | Anaphylatoxin-like 3 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 176_215 | 26.333333333333332 | 684.0 | Domain | EGF-like 1 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 216_261 | 26.333333333333332 | 684.0 | Domain | EGF-like 2%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 262_307 | 26.333333333333332 | 684.0 | Domain | EGF-like 3%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 308_355 | 26.333333333333332 | 684.0 | Domain | EGF-like 4%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 356_398 | 26.333333333333332 | 684.0 | Domain | EGF-like 5%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 36_76 | 26.333333333333332 | 684.0 | Domain | Anaphylatoxin-like 1 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 399_440 | 26.333333333333332 | 684.0 | Domain | EGF-like 6%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 441_480 | 26.333333333333332 | 684.0 | Domain | EGF-like 7%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 481_524 | 26.333333333333332 | 684.0 | Domain | EGF-like 8%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 525_578 | 26.333333333333332 | 684.0 | Domain | EGF-like 9%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 77_111 | 26.333333333333332 | 684.0 | Domain | Anaphylatoxin-like 2 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 112_144 | 26.333333333333332 | 704.0 | Domain | Anaphylatoxin-like 3 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 176_215 | 26.333333333333332 | 704.0 | Domain | EGF-like 1 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 216_261 | 26.333333333333332 | 704.0 | Domain | EGF-like 2%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 262_307 | 26.333333333333332 | 704.0 | Domain | EGF-like 3%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 308_355 | 26.333333333333332 | 704.0 | Domain | EGF-like 4%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 356_398 | 26.333333333333332 | 704.0 | Domain | EGF-like 5%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 36_76 | 26.333333333333332 | 704.0 | Domain | Anaphylatoxin-like 1 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 399_440 | 26.333333333333332 | 704.0 | Domain | EGF-like 6%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 441_480 | 26.333333333333332 | 704.0 | Domain | EGF-like 7%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 481_524 | 26.333333333333332 | 704.0 | Domain | EGF-like 8%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 525_578 | 26.333333333333332 | 704.0 | Domain | EGF-like 9%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 77_111 | 26.333333333333332 | 704.0 | Domain | Anaphylatoxin-like 2 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 112_144 | 26.333333333333332 | 567.0 | Domain | Anaphylatoxin-like 3 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 176_215 | 26.333333333333332 | 567.0 | Domain | EGF-like 1 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 216_261 | 26.333333333333332 | 567.0 | Domain | EGF-like 2%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 262_307 | 26.333333333333332 | 567.0 | Domain | EGF-like 3%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 308_355 | 26.333333333333332 | 567.0 | Domain | EGF-like 4%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 356_398 | 26.333333333333332 | 567.0 | Domain | EGF-like 5%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 36_76 | 26.333333333333332 | 567.0 | Domain | Anaphylatoxin-like 1 | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 399_440 | 26.333333333333332 | 567.0 | Domain | EGF-like 6%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 441_480 | 26.333333333333332 | 567.0 | Domain | EGF-like 7%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 481_524 | 26.333333333333332 | 567.0 | Domain | EGF-like 8%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 525_578 | 26.333333333333332 | 567.0 | Domain | EGF-like 9%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 77_111 | 26.333333333333332 | 567.0 | Domain | Anaphylatoxin-like 2 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000262722 | 0 | 15 | 356_440 | 0 | 684.0 | Region | Note=Self-association and FN1-binding%3B calcium is necessary for homotypic binding%2C but not for heterotypic binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000340923 | 0 | 15 | 356_440 | 0 | 567.0 | Region | Note=Self-association and FN1-binding%3B calcium is necessary for homotypic binding%2C but not for heterotypic binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000262722 | 0 | 15 | 356_440 | 26.333333333333332 | 684.0 | Region | Note=Self-association and FN1-binding%3B calcium is necessary for homotypic binding%2C but not for heterotypic binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000327858 | 0 | 17 | 356_440 | 26.333333333333332 | 704.0 | Region | Note=Self-association and FN1-binding%3B calcium is necessary for homotypic binding%2C but not for heterotypic binding | |
| Tgene | FBLN1 | chr22:46088958 | chr22:45914562 | ENST00000340923 | 0 | 15 | 356_440 | 26.333333333333332 | 567.0 | Region | Note=Self-association and FN1-binding%3B calcium is necessary for homotypic binding%2C but not for heterotypic binding |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 112_144 | 657.3333333333334 | 704.0 | Domain | Anaphylatoxin-like 3 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 176_215 | 657.3333333333334 | 704.0 | Domain | EGF-like 1 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 216_261 | 657.3333333333334 | 704.0 | Domain | EGF-like 2%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 262_307 | 657.3333333333334 | 704.0 | Domain | EGF-like 3%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 308_355 | 657.3333333333334 | 704.0 | Domain | EGF-like 4%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 356_398 | 657.3333333333334 | 704.0 | Domain | EGF-like 5%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 36_76 | 657.3333333333334 | 704.0 | Domain | Anaphylatoxin-like 1 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 399_440 | 657.3333333333334 | 704.0 | Domain | EGF-like 6%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 441_480 | 657.3333333333334 | 704.0 | Domain | EGF-like 7%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 481_524 | 657.3333333333334 | 704.0 | Domain | EGF-like 8%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 525_578 | 657.3333333333334 | 704.0 | Domain | EGF-like 9%3B calcium-binding | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 77_111 | 657.3333333333334 | 704.0 | Domain | Anaphylatoxin-like 2 | |
| Tgene | FBLN1 | chr22:46085783 | chr22:45996187 | ENST00000327858 | 15 | 17 | 356_440 | 657.3333333333334 | 704.0 | Region | Note=Self-association and FN1-binding%3B calcium is necessary for homotypic binding%2C but not for heterotypic binding |
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Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| ATXN10 | |
| FBLN1 |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs to ATXN10-FBLN1 |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to ATXN10-FBLN1 |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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