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Fusion Protein:BANP-JPH3 |
Fusion Protein Summary |
 Fusion gene summary |
| Fusion partner gene information | Fusion gene name: BANP-JPH3 | FusionPDB ID: 8958 | FusionGDB2.0 ID: 8958 | Hgene | Tgene | Gene symbol | BANP | JPH3 | Gene ID | 54971 | 57338 |
| Gene name | BTG3 associated nuclear protein | junctophilin 3 | |
| Synonyms | BEND1|SMAR1|SMARBP1 | CAGL237|HDL2|JP-3|JP3|TNRC22 | |
| Cytomap | 16q24.2 | 16q24.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | protein BANPBEN domain-containing protein 1scaffold/matrix-associated region-1-binding protein | junctophilin-3junctophilin type 3trinucleotide repeat containing 22 | |
| Modification date | 20200315 | 20200314 | |
| UniProtAcc | Q8N9N5 | Q8WXH2 | |
| Ensembl transtripts involved in fusion gene | ENST ids | ENST00000286122, ENST00000355022, ENST00000355163, ENST00000393207, ENST00000393208, ENST00000479780, ENST00000538234, ENST00000481948, | ENST00000563609, ENST00000284262, |
| Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0) | * DoF score | 8 X 7 X 8=448 | 4 X 3 X 4=48 |
| # samples | 8 | 4 | |
| ** MAII score | log2(8/448*10)=-2.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context (manual curation of fusion genes in FusionPDB) | PubMed: BANP [Title/Abstract] AND JPH3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0) | BANP(88052273)-JPH3(87677864), # samples:3 | ||
| Anticipated loss of major functional domain due to fusion event. | BANP-JPH3 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. BANP-JPH3 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. BANP-JPH3 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. BANP-JPH3 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene breakpoints across BANP (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across JPH3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion Gene Sample Information |
| Fusion gene information from FusionGDB2.0. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | SKCM | TCGA-ER-A1A1-06A | BANP | chr16 | 88052273 | - | JPH3 | chr16 | 87677864 | + |
| ChimerDB4 | SKCM | TCGA-ER-A1A1-06A | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + |
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Fusion ORF Analysis |
| Fusion information from ORFfinder translation from full-length transcript sequence from FusionPDB. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000286122 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4384 | 1023 | 152 | 2887 | 911 |
| ENST00000355163 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4309 | 948 | 152 | 2812 | 886 |
| ENST00000479780 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4289 | 928 | 150 | 2792 | 880 |
| ENST00000393208 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4289 | 928 | 150 | 2792 | 880 |
| ENST00000355022 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4236 | 875 | 97 | 2739 | 880 |
| ENST00000538234 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4447 | 1086 | 191 | 2950 | 919 |
| ENST00000393207 | BANP | chr16 | 88052273 | + | ENST00000284262 | JPH3 | chr16 | 87677864 | + | 4453 | 1092 | 221 | 2956 | 911 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000286122 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.004904692 | 0.9950954 |
| ENST00000355163 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.007808432 | 0.9921916 |
| ENST00000479780 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.007165356 | 0.9928347 |
| ENST00000393208 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.007165356 | 0.9928347 |
| ENST00000355022 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.007139639 | 0.9928604 |
| ENST00000538234 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.00502544 | 0.9949746 |
| ENST00000393207 | ENST00000284262 | BANP | chr16 | 88052273 | + | JPH3 | chr16 | 87677864 | + | 0.004559794 | 0.9954401 |
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Fusion Amino Acid Sequences |
| For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP >8958_8958_1_BANP-JPH3_BANP_chr16_88052273_ENST00000286122_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=911AA_BP=291 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHS PIQVPMVAGSPLGATQTCNKVRCVVPQTTVILNNDRQNAIVAKMEDPLSNRAPDSLENVISNAVPGRRQNTIVVKVPGQEDSHHEDGESG SEASDSVSSCGQAGSQSIGSNVTLITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNL SGQGKHGKKQLDPLTIYGIRWTYQGQWVGGMRQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFV LVAHSDSEILKSKKKGLFRRSLLSGLKLRKSESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDIDATTTET YVGEWKNDKRSGFGVSQRSDGLKYEGEWASNRRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEAAERAATIA KQKAEIAASRTSHSRAKAEAALTAAQKAQEEARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTP SDLTPDDSPLQSFPTSPAATPPPAPAARNKVAHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFR TRGSGRKQPGNPKPRERRTESPPVFTWTSHHRASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPED RGFGVQRLRSKAQNKENFRPASSAEPAVQKLASLRLGGAEPRLLRWDLTFSPPQKSLPVALESDEENGDELKSSTGSAPILVVMVILLNI -------------------------------------------------------------- >8958_8958_2_BANP-JPH3_BANP_chr16_88052273_ENST00000355022_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=880AA_BP=260 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDSIEAKLQALEATCKSLEEKLD LVTNKQHSPIQVPMVAGSPLGATQTCNKVRCAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRWTYQGQWVGGM RQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFVLVAHSDSEILKSKKKGLFRRSLLSGLKLRKS ESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDIDATTTETYVGEWKNDKRSGFGVSQRSDGLKYEGEWASN RRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEAAERAATIAKQKAEIAASRTSHSRAKAEAALTAAQKAQEE ARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTPSDLTPDDSPLQSFPTSPAATPPPAPAARNKV AHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFRTRGSGRKQPGNPKPRERRTESPPVFTWTSHH RASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPEDRGFGVQRLRSKAQNKENFRPASSAEPAVQKL -------------------------------------------------------------- >8958_8958_3_BANP-JPH3_BANP_chr16_88052273_ENST00000355163_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=886AA_BP=266 MMSEHDLADVVQIAVEDLSPDHPGTELWDIVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDSIEAKLQALEATCKS LEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVRCAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLI TLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRWTYQG QWVGGMRQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFVLVAHSDSEILKSKKKGLFRRSLLSG LKLRKSESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDIDATTTETYVGEWKNDKRSGFGVSQRSDGLKYE GEWASNRRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEAAERAATIAKQKAEIAASRTSHSRAKAEAALTAA QKAQEEARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTPSDLTPDDSPLQSFPTSPAATPPPAP AARNKVAHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFRTRGSGRKQPGNPKPRERRTESPPVF TWTSHHRASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPEDRGFGVQRLRSKAQNKENFRPASSAE -------------------------------------------------------------- >8958_8958_4_BANP-JPH3_BANP_chr16_88052273_ENST00000393207_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=911AA_BP=291 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHS PIQVPMVAGSPLGATQTCNKVRCVVPQTTVILNNDRQNAIVAKMEDPLSNRAPDSLENVISNAVPGRRQNTIVVKVPGQEDSHHEDGESG SEASDSVSSCGQAGSQSIGSNVTLITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNL SGQGKHGKKQLDPLTIYGIRWTYQGQWVGGMRQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFV LVAHSDSEILKSKKKGLFRRSLLSGLKLRKSESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDIDATTTET YVGEWKNDKRSGFGVSQRSDGLKYEGEWASNRRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEAAERAATIA KQKAEIAASRTSHSRAKAEAALTAAQKAQEEARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTP SDLTPDDSPLQSFPTSPAATPPPAPAARNKVAHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFR TRGSGRKQPGNPKPRERRTESPPVFTWTSHHRASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPED RGFGVQRLRSKAQNKENFRPASSAEPAVQKLASLRLGGAEPRLLRWDLTFSPPQKSLPVALESDEENGDELKSSTGSAPILVVMVILLNI -------------------------------------------------------------- >8958_8958_5_BANP-JPH3_BANP_chr16_88052273_ENST00000393208_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=880AA_BP=260 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDSIEAKLQALEATCKSLEEKLD LVTNKQHSPIQVPMVAGSPLGATQTCNKVRCAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRWTYQGQWVGGM RQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFVLVAHSDSEILKSKKKGLFRRSLLSGLKLRKS ESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDIDATTTETYVGEWKNDKRSGFGVSQRSDGLKYEGEWASN RRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEAAERAATIAKQKAEIAASRTSHSRAKAEAALTAAQKAQEE ARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTPSDLTPDDSPLQSFPTSPAATPPPAPAARNKV AHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFRTRGSGRKQPGNPKPRERRTESPPVFTWTSHH RASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPEDRGFGVQRLRSKAQNKENFRPASSAEPAVQKL -------------------------------------------------------------- >8958_8958_6_BANP-JPH3_BANP_chr16_88052273_ENST00000479780_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=880AA_BP=260 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDSIEAKLQALEATCKSLEEKLD LVTNKQHSPIQVPMVAGSPLGATQTCNKVRCAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEE DYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRWTYQGQWVGGM RQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSPAVSRGGFVLVAHSDSEILKSKKKGLFRRSLLSGLKLRKS ESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDDIDATTTETYVGEWKNDKRSGFGVSQRSDGLKYEGEWASN RRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEAAERAATIAKQKAEIAASRTSHSRAKAEAALTAAQKAQEE ARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPELYRKGTTPSDLTPDDSPLQSFPTSPAATPPPAPAARNKV AHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRGGLLVDDFRTRGSGRKQPGNPKPRERRTESPPVFTWTSHH RASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGLGDDHRPEDRGFGVQRLRSKAQNKENFRPASSAEPAVQKL -------------------------------------------------------------- >8958_8958_7_BANP-JPH3_BANP_chr16_88052273_ENST00000538234_JPH3_chr16_87677864_ENST00000284262_length(amino acids)=919AA_BP=299 MMSEHDLADVVQIAVEDLSPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKSFLYSINQTICLRLDSIEAKLQALEATCKSLEEKLD LVTNKQHSPIQVPMVAGSPLGATQTCNKVRCVVPQTTVILNNDRQNAIVAKMEDPLSNRAPDSLENVISNAVPGRRQNTIVVKVPGQEDS HHEDGESGSEASDSVSSCGQAGSQSIGSNVTLITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEKMALTLLDYLFHR EVQAVSNLSGQGKHGKKQLDPLTIYGIRWTYQGQWVGGMRQGYGVRQSVPYGMAAVIRSPLRTSINSLRSEHTNGTALHPDASPAVAGSP AVSRGGFVLVAHSDSEILKSKKKGLFRRSLLSGLKLRKSESKSSLASQRSKQSSFRSEAGMSTVSSTASDIHSTISLGEAEAELAVIEDD IDATTTETYVGEWKNDKRSGFGVSQRSDGLKYEGEWASNRRHGYGCMTFPDGTKEEGKYKQNILVGGKRKNLIPLRASKIREKVDRAVEA AERAATIAKQKAEIAASRTSHSRAKAEAALTAAQKAQEEARIARITAKEFSPSFQHRENGLEYQRPKRQTSCDDIEVLSTGTPLQQESPE LYRKGTTPSDLTPDDSPLQSFPTSPAATPPPAPAARNKVAHFSRQVSVDEERGGDIQMLLEGRAGDCARSSWGEEQAGGSRGVRSGALRG GLLVDDFRTRGSGRKQPGNPKPRERRTESPPVFTWTSHHRASNHSPGGSRLLELQEEKLSNYRMEMKPLLRMETHPQKRRYSKGGACRGL GDDHRPEDRGFGVQRLRSKAQNKENFRPASSAEPAVQKLASLRLGGAEPRLLRWDLTFSPPQKSLPVALESDEENGDELKSSTGSAPILV -------------------------------------------------------------- |
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Fusion Protein Functional Features |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr16:88052273/chr16:87677864) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| BANP | JPH3 |
| FUNCTION: Controls V(D)J recombination during T-cell development by repressing T-cell receptor (TCR) beta enhancer function. Binds to scaffold/matrix attachment region beta (S/MARbeta), an ATC-rich DNA sequence located upstream of the TCR beta enhancer. Represses cyclin D1 transcription by recruiting HDAC1 to its promoter, thereby diminishing H3K9ac, H3S10ph and H4K8ac levels. Promotes TP53 'Ser-15' phosphorylation and nuclear accumulation, which causes cell cycle arrest (By similarity). {ECO:0000250, ECO:0000269|PubMed:16166625}. | FUNCTION: Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH3 is brain-specific and appears to have an active role in certain neurons involved in motor coordination and memory. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - Retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000286122 | + | 7 | 14 | 53_90 | 290.3333333333333 | 520.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355022 | + | 6 | 12 | 53_90 | 259.3333333333333 | 470.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355163 | + | 6 | 13 | 53_90 | 265.3333333333333 | 498.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393207 | + | 7 | 14 | 53_90 | 290.3333333333333 | 520.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393208 | + | 6 | 13 | 53_90 | 259.3333333333333 | 492.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000479780 | + | 6 | 12 | 53_90 | 259.3333333333333 | 467.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000538234 | + | 7 | 13 | 53_90 | 298.3333333333333 | 509.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 366_416 | 127.33333333333333 | 749.0 | Compositional bias | Note=Ala-rich | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 130_152 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 6 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 288_310 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 7 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 311_333 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 8 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 728_748 | 127.33333333333333 | 749.0 | Transmembrane | Helical%3B Anchor for type IV membrane protein |
| - Not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000286122 | + | 7 | 14 | 361_426 | 290.3333333333333 | 520.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355022 | + | 6 | 12 | 361_426 | 259.3333333333333 | 470.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355163 | + | 6 | 13 | 361_426 | 265.3333333333333 | 498.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393207 | + | 7 | 14 | 361_426 | 290.3333333333333 | 520.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393208 | + | 6 | 13 | 361_426 | 259.3333333333333 | 492.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000479780 | + | 6 | 12 | 361_426 | 259.3333333333333 | 467.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000538234 | + | 7 | 13 | 361_426 | 298.3333333333333 | 509.0 | Compositional bias | Note=Gln-rich |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000286122 | + | 7 | 14 | 226_322 | 290.3333333333333 | 520.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355022 | + | 6 | 12 | 226_322 | 259.3333333333333 | 470.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355163 | + | 6 | 13 | 226_322 | 265.3333333333333 | 498.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393207 | + | 7 | 14 | 226_322 | 290.3333333333333 | 520.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393208 | + | 6 | 13 | 226_322 | 259.3333333333333 | 492.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000479780 | + | 6 | 12 | 226_322 | 259.3333333333333 | 467.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000538234 | + | 7 | 13 | 226_322 | 298.3333333333333 | 509.0 | Domain | BEN |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000286122 | + | 7 | 14 | 320_349 | 290.3333333333333 | 520.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000286122 | + | 7 | 14 | 342_393 | 290.3333333333333 | 520.0 | Region | DNA-binding |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355022 | + | 6 | 12 | 320_349 | 259.3333333333333 | 470.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355022 | + | 6 | 12 | 342_393 | 259.3333333333333 | 470.0 | Region | DNA-binding |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355163 | + | 6 | 13 | 320_349 | 265.3333333333333 | 498.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355163 | + | 6 | 13 | 342_393 | 265.3333333333333 | 498.0 | Region | DNA-binding |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393207 | + | 7 | 14 | 320_349 | 290.3333333333333 | 520.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393207 | + | 7 | 14 | 342_393 | 290.3333333333333 | 520.0 | Region | DNA-binding |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393208 | + | 6 | 13 | 320_349 | 259.3333333333333 | 492.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393208 | + | 6 | 13 | 342_393 | 259.3333333333333 | 492.0 | Region | DNA-binding |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000479780 | + | 6 | 12 | 320_349 | 259.3333333333333 | 467.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000479780 | + | 6 | 12 | 342_393 | 259.3333333333333 | 467.0 | Region | DNA-binding |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000538234 | + | 7 | 13 | 320_349 | 298.3333333333333 | 509.0 | Region | Necessary and sufficient for TP53 activation |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000538234 | + | 7 | 13 | 342_393 | 298.3333333333333 | 509.0 | Region | DNA-binding |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 4_143 | 127.33333333333333 | 749.0 | Compositional bias | Note=Gly-rich | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 107_129 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 5 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 15_37 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 1 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 39_60 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 2 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 61_82 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 3 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 83_105 | 127.33333333333333 | 749.0 | Repeat | Note=MORN 4 | |
| Tgene | JPH3 | chr16:88052273 | chr16:87677864 | ENST00000284262 | 0 | 5 | 1_727 | 127.33333333333333 | 749.0 | Topological domain | Cytoplasmic |
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Fusion Protein-Protein Interaction |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160) |
| Gene | PPI interactors |
| Protein-protein interactors based on sequence similarity (STRING) |
| Gene | STRING network |
| BANP | |
| JPH3 |
| - Retained interactions in fusion protein (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost interactions due to fusion (protein functional feature from UniProt). |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000286122 | + | 7 | 14 | 152_342 | 290.3333333333333 | 520.0 | CUX1 and HDAC1 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355022 | + | 6 | 12 | 152_342 | 259.3333333333333 | 470.0 | CUX1 and HDAC1 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000355163 | + | 6 | 13 | 152_342 | 265.3333333333333 | 498.0 | CUX1 and HDAC1 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393207 | + | 7 | 14 | 152_342 | 290.3333333333333 | 520.0 | CUX1 and HDAC1 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000393208 | + | 6 | 13 | 152_342 | 259.3333333333333 | 492.0 | CUX1 and HDAC1 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000479780 | + | 6 | 12 | 152_342 | 259.3333333333333 | 467.0 | CUX1 and HDAC1 |
| Hgene | BANP | chr16:88052273 | chr16:87677864 | ENST00000538234 | + | 7 | 13 | 152_342 | 298.3333333333333 | 509.0 | CUX1 and HDAC1 |
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Related Drugs to BANP-JPH3 |
| Drugs used for this fusion-positive patient. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Drug | Source | PMID |
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Related Diseases to BANP-JPH3 |
| Diseases that have this fusion gene. (Manual curation of PubMed, 04-30-2022 + MyCancerGenome) |
| Hgene | Tgene | Disease | Source | PMID |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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