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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:TNC-GABBR2

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: TNC-GABBR2
FusionPDB ID: 92583
FusionGDB2.0 ID: 92583
HgeneTgene
Gene symbol

TNC

GABBR2

Gene ID

7134

9568

Gene nametroponin C1, slow skeletal and cardiac typegamma-aminobutyric acid type B receptor subunit 2
SynonymsCMD1Z|CMH13|TN-C|TNC|TNNCEIEE59|GABABR2|GPR51|GPRC3B|HG20|HRIHFB2099|NDPLHS
Cytomap

3p21.1

9q22.33

Type of geneprotein-codingprotein-coding
Descriptiontroponin C, slow skeletal and cardiac musclescardiac troponin Cslow twitch skeletal/cardiac muscle troponin Ctroponin C type 1 (slow)gamma-aminobutyric acid type B receptor subunit 2G-protein coupled receptor 51GABA-B receptor 2GABA-B receptor, R2 subunitGABA-B-R2GABA-BR2gamma-aminobutyric acid (GABA) B receptor, 2gamma-aminobutyric acid B receptor 2gb2
Modification date2020031320200313
UniProtAcc.

O75899

Ensembl transtripts involved in fusion geneENST idsENST00000340094, ENST00000341037, 
ENST00000345230, ENST00000346706, 
ENST00000350763, ENST00000423613, 
ENST00000535648, ENST00000537320, 
ENST00000542877, ENST00000481475, 
ENST00000477471, ENST00000259455, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score6 X 9 X 3=1628 X 8 X 5=320
# samples 88
** MAII scorelog2(8/162*10)=-1.01792190799726
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(8/320*10)=-2
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: TNC [Title/Abstract] AND GABBR2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)TNC(117819432)-GABBR2(101340354), # samples:2
Anticipated loss of major functional domain due to fusion event.TNC-GABBR2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
TNC-GABBR2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
TNC-GABBR2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
TNC-GABBR2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
TNC-GABBR2 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF.
TNC-GABBR2 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
TNC-GABBR2 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneTNC

GO:0006937

regulation of muscle contraction

18092822

HgeneTNC

GO:0060048

cardiac muscle contraction

25771144

TgeneGABBR2

GO:0007214

gamma-aminobutyric acid signaling pathway

9872316


check buttonFusion gene breakpoints across TNC (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across GABBR2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-D8-A1J9-01ATNCchr9

117819432

-GABBR2chr9

101340354

-
ChimerDB4BRCATCGA-D8-A1J9-01ATNCchr9

117835882

-GABBR2chr9

101340354

-


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000535648TNCchr9117819432-ENST00000259455GABBR2chr9101340354-8829384929639041202
ENST00000340094TNCchr9117819432-ENST00000259455GABBR2chr9101340354-8829384929639041202
ENST00000350763TNCchr9117819432-ENST00000259455GABBR2chr9101340354-9971499134650461566
ENST00000535648TNCchr9117835882-ENST00000259455GABBR2chr9101340354-8556357629636311111
ENST00000346706TNCchr9117835882-ENST00000259455GABBR2chr9101340354-8556357629636311111
ENST00000340094TNCchr9117835882-ENST00000259455GABBR2chr9101340354-8556357629636311111
ENST00000345230TNCchr9117835882-ENST00000259455GABBR2chr9101340354-8556357629636311111
ENST00000350763TNCchr9117835882-ENST00000259455GABBR2chr9101340354-8606362634636811111

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000535648ENST00000259455TNCchr9117819432-GABBR2chr9101340354-0.0007202050.9992798
ENST00000340094ENST00000259455TNCchr9117819432-GABBR2chr9101340354-0.0007202050.9992798
ENST00000350763ENST00000259455TNCchr9117819432-GABBR2chr9101340354-0.0019110110.998089
ENST00000535648ENST00000259455TNCchr9117835882-GABBR2chr9101340354-0.0009824490.9990176
ENST00000346706ENST00000259455TNCchr9117835882-GABBR2chr9101340354-0.0009824490.9990176
ENST00000340094ENST00000259455TNCchr9117835882-GABBR2chr9101340354-0.0009824490.9990176
ENST00000345230ENST00000259455TNCchr9117835882-GABBR2chr9101340354-0.0009824490.9990176
ENST00000350763ENST00000259455TNCchr9117835882-GABBR2chr9101340354-0.0010234890.9989766

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>92583_92583_1_TNC-GABBR2_TNC_chr9_117819432_ENST00000340094_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1202AA_BP=1184
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG
RHKSKPARVKASTAKEPEIGNLNVSDITPESFNLSWMATDGIFETFTIEIIDSNRLLETVEYNISGAERTAHISGLPPSTDFIVYLSGLA

--------------------------------------------------------------

>92583_92583_2_TNC-GABBR2_TNC_chr9_117819432_ENST00000350763_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1566AA_BP=1548
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG
RHKSKPARVKASTEQAPELENLTVTEVGWDGLRLNWTAADQAYEHFIIQVQEANKVEAARNLTVPGSLRAVDIPGLKAATPYTVSIYGVI
QGYRTPVLSAEASTGETPNLGEVVVAEVGWDALKLNWTAPEGAYEYFFIQVQEADTVEAAQNLTVPGGLRSTDLPGLKAATHYTITIRGV
TQDFSTTPLSVEVLTEEVPDMGNLTVTEVSWDALRLNWTTPDGTYDQFTIQVQEADQVEEAHNLTVPGSLRSMEIPGLRAGTPYTVTLHG
EVRGHSTRPLAVEVVTEDLPQLGDLAVSEVGWDGLRLNWTAADNAYEHFVIQVQEVNKVEAAQNLTLPGSLRAVDIPGLEAATPYRVSIY
GVIRGYRTPVLSAEASTAKEPEIGNLNVSDITPESFNLSWMATDGIFETFTIEIIDSNRLLETVEYNISGAERTAHISGLPPSTDFIVYL

--------------------------------------------------------------

>92583_92583_3_TNC-GABBR2_TNC_chr9_117819432_ENST00000535648_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1202AA_BP=1184
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG
RHKSKPARVKASTAKEPEIGNLNVSDITPESFNLSWMATDGIFETFTIEIIDSNRLLETVEYNISGAERTAHISGLPPSTDFIVYLSGLA

--------------------------------------------------------------

>92583_92583_4_TNC-GABBR2_TNC_chr9_117835882_ENST00000340094_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1111AA_BP=1093
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG

--------------------------------------------------------------

>92583_92583_5_TNC-GABBR2_TNC_chr9_117835882_ENST00000345230_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1111AA_BP=1093
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG

--------------------------------------------------------------

>92583_92583_6_TNC-GABBR2_TNC_chr9_117835882_ENST00000346706_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1111AA_BP=1093
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG

--------------------------------------------------------------

>92583_92583_7_TNC-GABBR2_TNC_chr9_117835882_ENST00000350763_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1111AA_BP=1093
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG

--------------------------------------------------------------

>92583_92583_8_TNC-GABBR2_TNC_chr9_117835882_ENST00000535648_GABBR2_chr9_101340354_ENST00000259455_length(amino acids)=1111AA_BP=1093
MLKVRYPRALEPQQHPAKPTSTMGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPVGSQCSVDL
ESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTR
PFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCS
REICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTG
EDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEG
YTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVC
EDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGR
CICNEGYSGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQELEPGVEYFIRVFAILEN
KKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKN
NTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG
DMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAV
KEDKESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQLPRNTTSYVLRGLEPGQEYNVLLTAEKG

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr9:117819432/chr9:101340354)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.GABBR2

O75899

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Component of a heterodimeric G-protein coupled receptor for GABA, formed by GABBR1 and GABBR2 (PubMed:9872316, PubMed:9872744, PubMed:15617512, PubMed:18165688, PubMed:22660477, PubMed:24305054). Within the heterodimeric GABA receptor, only GABBR1 seems to bind agonists, while GABBR2 mediates coupling to G proteins (PubMed:18165688). Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase (PubMed:10075644, PubMed:10773016, PubMed:24305054). Signaling inhibits adenylate cyclase, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipid hydrolysis (PubMed:10075644, PubMed:9872744, PubMed:10906333, PubMed:10773016). Plays a critical role in the fine-tuning of inhibitory synaptic transmission (PubMed:9872744, PubMed:22660477). Pre-synaptic GABA receptor inhibits neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA receptor decreases neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials (PubMed:9872316, PubMed:10075644, PubMed:9872744, PubMed:22660477). Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception (Probable). {ECO:0000269|PubMed:10075644, ECO:0000269|PubMed:10328880, ECO:0000269|PubMed:15617512, ECO:0000269|PubMed:18165688, ECO:0000269|PubMed:22660477, ECO:0000269|PubMed:24305054, ECO:0000269|PubMed:9872316, ECO:0000269|PubMed:9872744, ECO:0000305}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124118_1451162.33333333333331838.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528118_1451526.33333333333332202.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123118_1451162.33333333333331747.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024118_1451071.33333333333331838.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021118_1451071.33333333333331565.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022118_1451071.33333333333331656.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028118_1451071.33333333333332202.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023118_1451071.33333333333331747.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920118_1451071.33333333333331565.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241076_11651162.33333333333331838.0DomainFibronectin type-III 6
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124174_1861162.33333333333331838.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124186_2171162.33333333333331838.0DomainEGF-like 2
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124217_2481162.33333333333331838.0DomainEGF-like 3
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124248_2801162.33333333333331838.0DomainEGF-like 4
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124280_3111162.33333333333331838.0DomainEGF-like 5
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124311_3421162.33333333333331838.0DomainEGF-like 6
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124342_3731162.33333333333331838.0DomainEGF-like 7
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124373_4041162.33333333333331838.0DomainEGF-like 8
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124404_4351162.33333333333331838.0DomainEGF-like 9
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124435_4661162.33333333333331838.0DomainEGF-like 10
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124466_4971162.33333333333331838.0DomainEGF-like 11
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124497_5281162.33333333333331838.0DomainEGF-like 12
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124528_5591162.33333333333331838.0DomainEGF-like 13
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124559_5901162.33333333333331838.0DomainEGF-like 14
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124590_6211162.33333333333331838.0DomainEGF-like 15
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124625_7151162.33333333333331838.0DomainFibronectin type-III 1
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124716_8041162.33333333333331838.0DomainFibronectin type-III 2
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124805_8941162.33333333333331838.0DomainFibronectin type-III 3
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124895_9901162.33333333333331838.0DomainFibronectin type-III 4
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-1124991_10751162.33333333333331838.0DomainFibronectin type-III 5
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281076_11651526.33333333333332202.0DomainFibronectin type-III 6
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281167_12561526.33333333333332202.0DomainFibronectin type-III 7
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281258_13501526.33333333333332202.0DomainFibronectin type-III 8
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281351_14391526.33333333333332202.0DomainFibronectin type-III 9
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528174_1861526.33333333333332202.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528186_2171526.33333333333332202.0DomainEGF-like 2
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528217_2481526.33333333333332202.0DomainEGF-like 3
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528248_2801526.33333333333332202.0DomainEGF-like 4
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528280_3111526.33333333333332202.0DomainEGF-like 5
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528311_3421526.33333333333332202.0DomainEGF-like 6
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528342_3731526.33333333333332202.0DomainEGF-like 7
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528373_4041526.33333333333332202.0DomainEGF-like 8
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528404_4351526.33333333333332202.0DomainEGF-like 9
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528435_4661526.33333333333332202.0DomainEGF-like 10
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528466_4971526.33333333333332202.0DomainEGF-like 11
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528497_5281526.33333333333332202.0DomainEGF-like 12
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528528_5591526.33333333333332202.0DomainEGF-like 13
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528559_5901526.33333333333332202.0DomainEGF-like 14
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528590_6211526.33333333333332202.0DomainEGF-like 15
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528625_7151526.33333333333332202.0DomainFibronectin type-III 1
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528716_8041526.33333333333332202.0DomainFibronectin type-III 2
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528805_8941526.33333333333332202.0DomainFibronectin type-III 3
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528895_9901526.33333333333332202.0DomainFibronectin type-III 4
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-1528991_10751526.33333333333332202.0DomainFibronectin type-III 5
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231076_11651162.33333333333331747.0DomainFibronectin type-III 6
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123174_1861162.33333333333331747.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123186_2171162.33333333333331747.0DomainEGF-like 2
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123217_2481162.33333333333331747.0DomainEGF-like 3
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123248_2801162.33333333333331747.0DomainEGF-like 4
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123280_3111162.33333333333331747.0DomainEGF-like 5
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123311_3421162.33333333333331747.0DomainEGF-like 6
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123342_3731162.33333333333331747.0DomainEGF-like 7
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123373_4041162.33333333333331747.0DomainEGF-like 8
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123404_4351162.33333333333331747.0DomainEGF-like 9
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123435_4661162.33333333333331747.0DomainEGF-like 10
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123466_4971162.33333333333331747.0DomainEGF-like 11
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123497_5281162.33333333333331747.0DomainEGF-like 12
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123528_5591162.33333333333331747.0DomainEGF-like 13
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123559_5901162.33333333333331747.0DomainEGF-like 14
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123590_6211162.33333333333331747.0DomainEGF-like 15
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123625_7151162.33333333333331747.0DomainFibronectin type-III 1
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123716_8041162.33333333333331747.0DomainFibronectin type-III 2
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123805_8941162.33333333333331747.0DomainFibronectin type-III 3
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123895_9901162.33333333333331747.0DomainFibronectin type-III 4
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-1123991_10751162.33333333333331747.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024174_1861071.33333333333331838.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024186_2171071.33333333333331838.0DomainEGF-like 2
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024217_2481071.33333333333331838.0DomainEGF-like 3
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024248_2801071.33333333333331838.0DomainEGF-like 4
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024280_3111071.33333333333331838.0DomainEGF-like 5
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024311_3421071.33333333333331838.0DomainEGF-like 6
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024342_3731071.33333333333331838.0DomainEGF-like 7
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024373_4041071.33333333333331838.0DomainEGF-like 8
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024404_4351071.33333333333331838.0DomainEGF-like 9
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024435_4661071.33333333333331838.0DomainEGF-like 10
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024466_4971071.33333333333331838.0DomainEGF-like 11
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024497_5281071.33333333333331838.0DomainEGF-like 12
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024528_5591071.33333333333331838.0DomainEGF-like 13
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024559_5901071.33333333333331838.0DomainEGF-like 14
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024590_6211071.33333333333331838.0DomainEGF-like 15
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024625_7151071.33333333333331838.0DomainFibronectin type-III 1
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024716_8041071.33333333333331838.0DomainFibronectin type-III 2
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024805_8941071.33333333333331838.0DomainFibronectin type-III 3
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024895_9901071.33333333333331838.0DomainFibronectin type-III 4
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021174_1861071.33333333333331565.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021186_2171071.33333333333331565.0DomainEGF-like 2
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021217_2481071.33333333333331565.0DomainEGF-like 3
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021248_2801071.33333333333331565.0DomainEGF-like 4
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021280_3111071.33333333333331565.0DomainEGF-like 5
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021311_3421071.33333333333331565.0DomainEGF-like 6
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021342_3731071.33333333333331565.0DomainEGF-like 7
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021373_4041071.33333333333331565.0DomainEGF-like 8
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021404_4351071.33333333333331565.0DomainEGF-like 9
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021435_4661071.33333333333331565.0DomainEGF-like 10
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021466_4971071.33333333333331565.0DomainEGF-like 11
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021497_5281071.33333333333331565.0DomainEGF-like 12
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021528_5591071.33333333333331565.0DomainEGF-like 13
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021559_5901071.33333333333331565.0DomainEGF-like 14
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021590_6211071.33333333333331565.0DomainEGF-like 15
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021625_7151071.33333333333331565.0DomainFibronectin type-III 1
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021716_8041071.33333333333331565.0DomainFibronectin type-III 2
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021805_8941071.33333333333331565.0DomainFibronectin type-III 3
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021895_9901071.33333333333331565.0DomainFibronectin type-III 4
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022174_1861071.33333333333331656.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022186_2171071.33333333333331656.0DomainEGF-like 2
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022217_2481071.33333333333331656.0DomainEGF-like 3
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022248_2801071.33333333333331656.0DomainEGF-like 4
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022280_3111071.33333333333331656.0DomainEGF-like 5
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022311_3421071.33333333333331656.0DomainEGF-like 6
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022342_3731071.33333333333331656.0DomainEGF-like 7
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022373_4041071.33333333333331656.0DomainEGF-like 8
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022404_4351071.33333333333331656.0DomainEGF-like 9
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022435_4661071.33333333333331656.0DomainEGF-like 10
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022466_4971071.33333333333331656.0DomainEGF-like 11
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022497_5281071.33333333333331656.0DomainEGF-like 12
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022528_5591071.33333333333331656.0DomainEGF-like 13
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022559_5901071.33333333333331656.0DomainEGF-like 14
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022590_6211071.33333333333331656.0DomainEGF-like 15
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022625_7151071.33333333333331656.0DomainFibronectin type-III 1
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022716_8041071.33333333333331656.0DomainFibronectin type-III 2
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022805_8941071.33333333333331656.0DomainFibronectin type-III 3
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022895_9901071.33333333333331656.0DomainFibronectin type-III 4
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028174_1861071.33333333333332202.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028186_2171071.33333333333332202.0DomainEGF-like 2
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028217_2481071.33333333333332202.0DomainEGF-like 3
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028248_2801071.33333333333332202.0DomainEGF-like 4
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028280_3111071.33333333333332202.0DomainEGF-like 5
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028311_3421071.33333333333332202.0DomainEGF-like 6
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028342_3731071.33333333333332202.0DomainEGF-like 7
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028373_4041071.33333333333332202.0DomainEGF-like 8
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028404_4351071.33333333333332202.0DomainEGF-like 9
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028435_4661071.33333333333332202.0DomainEGF-like 10
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028466_4971071.33333333333332202.0DomainEGF-like 11
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028497_5281071.33333333333332202.0DomainEGF-like 12
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028528_5591071.33333333333332202.0DomainEGF-like 13
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028559_5901071.33333333333332202.0DomainEGF-like 14
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028590_6211071.33333333333332202.0DomainEGF-like 15
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028625_7151071.33333333333332202.0DomainFibronectin type-III 1
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028716_8041071.33333333333332202.0DomainFibronectin type-III 2
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028805_8941071.33333333333332202.0DomainFibronectin type-III 3
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028895_9901071.33333333333332202.0DomainFibronectin type-III 4
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023174_1861071.33333333333331747.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023186_2171071.33333333333331747.0DomainEGF-like 2
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023217_2481071.33333333333331747.0DomainEGF-like 3
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023248_2801071.33333333333331747.0DomainEGF-like 4
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023280_3111071.33333333333331747.0DomainEGF-like 5
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023311_3421071.33333333333331747.0DomainEGF-like 6
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023342_3731071.33333333333331747.0DomainEGF-like 7
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023373_4041071.33333333333331747.0DomainEGF-like 8
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023404_4351071.33333333333331747.0DomainEGF-like 9
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023435_4661071.33333333333331747.0DomainEGF-like 10
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023466_4971071.33333333333331747.0DomainEGF-like 11
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023497_5281071.33333333333331747.0DomainEGF-like 12
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023528_5591071.33333333333331747.0DomainEGF-like 13
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023559_5901071.33333333333331747.0DomainEGF-like 14
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023590_6211071.33333333333331747.0DomainEGF-like 15
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023625_7151071.33333333333331747.0DomainFibronectin type-III 1
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023716_8041071.33333333333331747.0DomainFibronectin type-III 2
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023805_8941071.33333333333331747.0DomainFibronectin type-III 3
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023895_9901071.33333333333331747.0DomainFibronectin type-III 4
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920174_1861071.33333333333331565.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920186_2171071.33333333333331565.0DomainEGF-like 2
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920217_2481071.33333333333331565.0DomainEGF-like 3
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920248_2801071.33333333333331565.0DomainEGF-like 4
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920280_3111071.33333333333331565.0DomainEGF-like 5
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920311_3421071.33333333333331565.0DomainEGF-like 6
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920342_3731071.33333333333331565.0DomainEGF-like 7
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920373_4041071.33333333333331565.0DomainEGF-like 8
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920404_4351071.33333333333331565.0DomainEGF-like 9
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920435_4661071.33333333333331565.0DomainEGF-like 10
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920466_4971071.33333333333331565.0DomainEGF-like 11
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920497_5281071.33333333333331565.0DomainEGF-like 12
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920528_5591071.33333333333331565.0DomainEGF-like 13
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920559_5901071.33333333333331565.0DomainEGF-like 14
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920590_6211071.33333333333331565.0DomainEGF-like 15
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920625_7151071.33333333333331565.0DomainFibronectin type-III 1
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920716_8041071.33333333333331565.0DomainFibronectin type-III 2
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920805_8941071.33333333333331565.0DomainFibronectin type-III 3
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920895_9901071.33333333333331565.0DomainFibronectin type-III 4
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019781_819107.0942.0Coiled coilOntology_term=ECO:0000255
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019781_819107.0942.0Coiled coilOntology_term=ECO:0000255
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019505_522107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019544_551107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019573_597107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019619_654107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019676_691107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019713_720107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019742_941107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019505_522107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019544_551107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019573_597107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019619_654107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019676_691107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019713_720107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019742_941107.0942.0Topological domainCytoplasmic
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019484_504107.0942.0TransmembraneHelical%3B Name%3D1
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019523_543107.0942.0TransmembraneHelical%3B Name%3D2
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019552_572107.0942.0TransmembraneHelical%3B Name%3D3
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019598_618107.0942.0TransmembraneHelical%3B Name%3D4
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019655_675107.0942.0TransmembraneHelical%3B Name%3D5
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019692_712107.0942.0TransmembraneHelical%3B Name%3D6
TgeneGABBR2chr9:117819432chr9:101340354ENST00000259455019721_741107.0942.0TransmembraneHelical%3B Name%3D7
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019484_504107.0942.0TransmembraneHelical%3B Name%3D1
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019523_543107.0942.0TransmembraneHelical%3B Name%3D2
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019552_572107.0942.0TransmembraneHelical%3B Name%3D3
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019598_618107.0942.0TransmembraneHelical%3B Name%3D4
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019655_675107.0942.0TransmembraneHelical%3B Name%3D5
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019692_712107.0942.0TransmembraneHelical%3B Name%3D6
TgeneGABBR2chr9:117835882chr9:101340354ENST00000259455019721_741107.0942.0TransmembraneHelical%3B Name%3D7

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121118_14501565.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122118_14501656.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120118_14501565.0Coiled coilOntology_term=ECO:0000255
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241167_12561162.33333333333331838.0DomainFibronectin type-III 7
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241258_13501162.33333333333331838.0DomainFibronectin type-III 8
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241351_14391162.33333333333331838.0DomainFibronectin type-III 9
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241440_15311162.33333333333331838.0DomainFibronectin type-III 10
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241533_16211162.33333333333331838.0DomainFibronectin type-III 11
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241622_17111162.33333333333331838.0DomainFibronectin type-III 12
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241712_18011162.33333333333331838.0DomainFibronectin type-III 13
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241802_18881162.33333333333331838.0DomainFibronectin type-III 14
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241889_19771162.33333333333331838.0DomainFibronectin type-III 15
HgeneTNCchr9:117819432chr9:101340354ENST00000340094-11241975_21901162.33333333333331838.0DomainFibrinogen C-terminal
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211076_116501565.0DomainFibronectin type-III 6
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211167_125601565.0DomainFibronectin type-III 7
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211258_135001565.0DomainFibronectin type-III 8
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211351_143901565.0DomainFibronectin type-III 9
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211440_153101565.0DomainFibronectin type-III 10
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211533_162101565.0DomainFibronectin type-III 11
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211622_171101565.0DomainFibronectin type-III 12
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211712_180101565.0DomainFibronectin type-III 13
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121174_18601565.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211802_188801565.0DomainFibronectin type-III 14
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121186_21701565.0DomainEGF-like 2
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211889_197701565.0DomainFibronectin type-III 15
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-1211975_219001565.0DomainFibrinogen C-terminal
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121217_24801565.0DomainEGF-like 3
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121248_28001565.0DomainEGF-like 4
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121280_31101565.0DomainEGF-like 5
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121311_34201565.0DomainEGF-like 6
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121342_37301565.0DomainEGF-like 7
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121373_40401565.0DomainEGF-like 8
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121404_43501565.0DomainEGF-like 9
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121435_46601565.0DomainEGF-like 10
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121466_49701565.0DomainEGF-like 11
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121497_52801565.0DomainEGF-like 12
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121528_55901565.0DomainEGF-like 13
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121559_59001565.0DomainEGF-like 14
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121590_62101565.0DomainEGF-like 15
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121625_71501565.0DomainFibronectin type-III 1
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121716_80401565.0DomainFibronectin type-III 2
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121805_89401565.0DomainFibronectin type-III 3
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121895_99001565.0DomainFibronectin type-III 4
HgeneTNCchr9:117819432chr9:101340354ENST00000345230-121991_107501565.0DomainFibronectin type-III 5
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221076_116501656.0DomainFibronectin type-III 6
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221167_125601656.0DomainFibronectin type-III 7
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221258_135001656.0DomainFibronectin type-III 8
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221351_143901656.0DomainFibronectin type-III 9
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221440_153101656.0DomainFibronectin type-III 10
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221533_162101656.0DomainFibronectin type-III 11
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221622_171101656.0DomainFibronectin type-III 12
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221712_180101656.0DomainFibronectin type-III 13
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122174_18601656.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221802_188801656.0DomainFibronectin type-III 14
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122186_21701656.0DomainEGF-like 2
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221889_197701656.0DomainFibronectin type-III 15
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-1221975_219001656.0DomainFibrinogen C-terminal
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122217_24801656.0DomainEGF-like 3
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122248_28001656.0DomainEGF-like 4
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122280_31101656.0DomainEGF-like 5
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122311_34201656.0DomainEGF-like 6
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122342_37301656.0DomainEGF-like 7
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122373_40401656.0DomainEGF-like 8
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122404_43501656.0DomainEGF-like 9
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122435_46601656.0DomainEGF-like 10
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122466_49701656.0DomainEGF-like 11
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122497_52801656.0DomainEGF-like 12
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122528_55901656.0DomainEGF-like 13
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122559_59001656.0DomainEGF-like 14
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122590_62101656.0DomainEGF-like 15
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122625_71501656.0DomainFibronectin type-III 1
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122716_80401656.0DomainFibronectin type-III 2
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122805_89401656.0DomainFibronectin type-III 3
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122895_99001656.0DomainFibronectin type-III 4
HgeneTNCchr9:117819432chr9:101340354ENST00000346706-122991_107501656.0DomainFibronectin type-III 5
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281440_15311526.33333333333332202.0DomainFibronectin type-III 10
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281533_16211526.33333333333332202.0DomainFibronectin type-III 11
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281622_17111526.33333333333332202.0DomainFibronectin type-III 12
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281712_18011526.33333333333332202.0DomainFibronectin type-III 13
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281802_18881526.33333333333332202.0DomainFibronectin type-III 14
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281889_19771526.33333333333332202.0DomainFibronectin type-III 15
HgeneTNCchr9:117819432chr9:101340354ENST00000350763-15281975_21901526.33333333333332202.0DomainFibrinogen C-terminal
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231167_12561162.33333333333331747.0DomainFibronectin type-III 7
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231258_13501162.33333333333331747.0DomainFibronectin type-III 8
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231351_14391162.33333333333331747.0DomainFibronectin type-III 9
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231440_15311162.33333333333331747.0DomainFibronectin type-III 10
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231533_16211162.33333333333331747.0DomainFibronectin type-III 11
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231622_17111162.33333333333331747.0DomainFibronectin type-III 12
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231712_18011162.33333333333331747.0DomainFibronectin type-III 13
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231802_18881162.33333333333331747.0DomainFibronectin type-III 14
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231889_19771162.33333333333331747.0DomainFibronectin type-III 15
HgeneTNCchr9:117819432chr9:101340354ENST00000535648-11231975_21901162.33333333333331747.0DomainFibrinogen C-terminal
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201076_116501565.0DomainFibronectin type-III 6
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201167_125601565.0DomainFibronectin type-III 7
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201258_135001565.0DomainFibronectin type-III 8
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201351_143901565.0DomainFibronectin type-III 9
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201440_153101565.0DomainFibronectin type-III 10
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201533_162101565.0DomainFibronectin type-III 11
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201622_171101565.0DomainFibronectin type-III 12
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201712_180101565.0DomainFibronectin type-III 13
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120174_18601565.0DomainEGF-like 1%3B incomplete
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201802_188801565.0DomainFibronectin type-III 14
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120186_21701565.0DomainEGF-like 2
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201889_197701565.0DomainFibronectin type-III 15
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-1201975_219001565.0DomainFibrinogen C-terminal
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120217_24801565.0DomainEGF-like 3
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120248_28001565.0DomainEGF-like 4
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120280_31101565.0DomainEGF-like 5
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120311_34201565.0DomainEGF-like 6
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120342_37301565.0DomainEGF-like 7
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120373_40401565.0DomainEGF-like 8
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120404_43501565.0DomainEGF-like 9
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120435_46601565.0DomainEGF-like 10
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120466_49701565.0DomainEGF-like 11
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120497_52801565.0DomainEGF-like 12
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120528_55901565.0DomainEGF-like 13
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120559_59001565.0DomainEGF-like 14
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120590_62101565.0DomainEGF-like 15
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120625_71501565.0DomainFibronectin type-III 1
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120716_80401565.0DomainFibronectin type-III 2
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120805_89401565.0DomainFibronectin type-III 3
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120895_99001565.0DomainFibronectin type-III 4
HgeneTNCchr9:117819432chr9:101340354ENST00000537320-120991_107501565.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241076_11651071.33333333333331838.0DomainFibronectin type-III 6
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241167_12561071.33333333333331838.0DomainFibronectin type-III 7
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241258_13501071.33333333333331838.0DomainFibronectin type-III 8
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241351_14391071.33333333333331838.0DomainFibronectin type-III 9
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241440_15311071.33333333333331838.0DomainFibronectin type-III 10
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241533_16211071.33333333333331838.0DomainFibronectin type-III 11
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241622_17111071.33333333333331838.0DomainFibronectin type-III 12
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241712_18011071.33333333333331838.0DomainFibronectin type-III 13
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241802_18881071.33333333333331838.0DomainFibronectin type-III 14
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241889_19771071.33333333333331838.0DomainFibronectin type-III 15
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-10241975_21901071.33333333333331838.0DomainFibrinogen C-terminal
HgeneTNCchr9:117835882chr9:101340354ENST00000340094-1024991_10751071.33333333333331838.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211076_11651071.33333333333331565.0DomainFibronectin type-III 6
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211167_12561071.33333333333331565.0DomainFibronectin type-III 7
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211258_13501071.33333333333331565.0DomainFibronectin type-III 8
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211351_14391071.33333333333331565.0DomainFibronectin type-III 9
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211440_15311071.33333333333331565.0DomainFibronectin type-III 10
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211533_16211071.33333333333331565.0DomainFibronectin type-III 11
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211622_17111071.33333333333331565.0DomainFibronectin type-III 12
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211712_18011071.33333333333331565.0DomainFibronectin type-III 13
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211802_18881071.33333333333331565.0DomainFibronectin type-III 14
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211889_19771071.33333333333331565.0DomainFibronectin type-III 15
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-10211975_21901071.33333333333331565.0DomainFibrinogen C-terminal
HgeneTNCchr9:117835882chr9:101340354ENST00000345230-1021991_10751071.33333333333331565.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221076_11651071.33333333333331656.0DomainFibronectin type-III 6
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221167_12561071.33333333333331656.0DomainFibronectin type-III 7
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221258_13501071.33333333333331656.0DomainFibronectin type-III 8
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221351_14391071.33333333333331656.0DomainFibronectin type-III 9
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221440_15311071.33333333333331656.0DomainFibronectin type-III 10
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221533_16211071.33333333333331656.0DomainFibronectin type-III 11
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221622_17111071.33333333333331656.0DomainFibronectin type-III 12
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221712_18011071.33333333333331656.0DomainFibronectin type-III 13
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221802_18881071.33333333333331656.0DomainFibronectin type-III 14
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221889_19771071.33333333333331656.0DomainFibronectin type-III 15
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-10221975_21901071.33333333333331656.0DomainFibrinogen C-terminal
HgeneTNCchr9:117835882chr9:101340354ENST00000346706-1022991_10751071.33333333333331656.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281076_11651071.33333333333332202.0DomainFibronectin type-III 6
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281167_12561071.33333333333332202.0DomainFibronectin type-III 7
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281258_13501071.33333333333332202.0DomainFibronectin type-III 8
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281351_14391071.33333333333332202.0DomainFibronectin type-III 9
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281440_15311071.33333333333332202.0DomainFibronectin type-III 10
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281533_16211071.33333333333332202.0DomainFibronectin type-III 11
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281622_17111071.33333333333332202.0DomainFibronectin type-III 12
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281712_18011071.33333333333332202.0DomainFibronectin type-III 13
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281802_18881071.33333333333332202.0DomainFibronectin type-III 14
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281889_19771071.33333333333332202.0DomainFibronectin type-III 15
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-10281975_21901071.33333333333332202.0DomainFibrinogen C-terminal
HgeneTNCchr9:117835882chr9:101340354ENST00000350763-1028991_10751071.33333333333332202.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231076_11651071.33333333333331747.0DomainFibronectin type-III 6
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231167_12561071.33333333333331747.0DomainFibronectin type-III 7
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231258_13501071.33333333333331747.0DomainFibronectin type-III 8
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231351_14391071.33333333333331747.0DomainFibronectin type-III 9
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231440_15311071.33333333333331747.0DomainFibronectin type-III 10
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231533_16211071.33333333333331747.0DomainFibronectin type-III 11
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231622_17111071.33333333333331747.0DomainFibronectin type-III 12
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231712_18011071.33333333333331747.0DomainFibronectin type-III 13
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231802_18881071.33333333333331747.0DomainFibronectin type-III 14
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231889_19771071.33333333333331747.0DomainFibronectin type-III 15
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-10231975_21901071.33333333333331747.0DomainFibrinogen C-terminal
HgeneTNCchr9:117835882chr9:101340354ENST00000535648-1023991_10751071.33333333333331747.0DomainFibronectin type-III 5
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201076_11651071.33333333333331565.0DomainFibronectin type-III 6
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201167_12561071.33333333333331565.0DomainFibronectin type-III 7
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201258_13501071.33333333333331565.0DomainFibronectin type-III 8
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201351_14391071.33333333333331565.0DomainFibronectin type-III 9
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201440_15311071.33333333333331565.0DomainFibronectin type-III 10
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201533_16211071.33333333333331565.0DomainFibronectin type-III 11
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201622_17111071.33333333333331565.0DomainFibronectin type-III 12
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201712_18011071.33333333333331565.0DomainFibronectin type-III 13
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201802_18881071.33333333333331565.0DomainFibronectin type-III 14
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201889_19771071.33333333333331565.0DomainFibronectin type-III 15
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-9201975_21901071.33333333333331565.0DomainFibrinogen C-terminal
HgeneTNCchr9:117835882chr9:101340354ENST00000537320-920991_10751071.33333333333331565.0DomainFibronectin type-III 5
TgeneGABBR2chr9:117819432chr9:101340354ENST0000025945501942_483107.0942.0Topological domainExtracellular
TgeneGABBR2chr9:117835882chr9:101340354ENST0000025945501942_483107.0942.0Topological domainExtracellular


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
TNC
GABBR2


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to TNC-GABBR2


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to TNC-GABBR2


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource