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Center for Computational Systems Medicine level1
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Fusion Gene Summary

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Fusion Gene Sample Information

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Fusion ORF Analysis

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Fusion Amino Acid Sequences

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Fusion Protein Functional Features

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Fusion Protein-Protein Interaction

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Related drugs with this fusion protein

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Related disease with this fusion protein

Fusion Protein:VAT1-CTNND1

Fusion Protein Summary

check button Fusion gene summary
Fusion partner gene informationFusion gene name: VAT1-CTNND1
FusionPDB ID: 97918
FusionGDB2.0 ID: 97918
HgeneTgene
Gene symbol

VAT1

CTNND1

Gene ID

10493

100528016

Gene namevesicle amine transport 1TMX2-CTNND1 readthrough (NMD candidate)
SynonymsVATICAS|CTNND1|p120(cas)|p120(ctn)
Cytomap

17q21.31

11q12.1

Type of geneprotein-codingncRNA
Descriptionsynaptic vesicle membrane protein VAT-1 homologmembrane protein of cholinergic synaptic vesiclesvesicle amine transport protein 1 homolog (T. californica)Cadherin-associated Src substrateCatenin delta-1TMX2-CTNND1 readthrough (non-protein coding)p120 catenin
Modification date2020031320200313
UniProtAcc.

O60716

Ensembl transtripts involved in fusion geneENST idsENST00000355653, ENST00000420567, 
ENST00000587173, 		ENST00000358694, 
ENST00000360682, ENST00000361332, 
ENST00000361391, ENST00000361796, 
ENST00000399039, ENST00000399050, 
ENST00000415361, ENST00000426142, 
ENST00000428599, ENST00000524630, 
ENST00000525902, ENST00000526357, 
ENST00000526772, ENST00000526938, 
ENST00000527467, ENST00000528232, 
ENST00000528621, ENST00000529526, 
ENST00000529873, ENST00000529919, 
ENST00000529986, ENST00000530094, 
ENST00000530748, ENST00000531014, 
ENST00000532245, ENST00000532463, 
ENST00000532649, ENST00000532787, 
ENST00000532844, ENST00000533667, 
ENST00000534579, 
Fusion gene scores for assessment (based on all fusion genes of FusionGDB 2.0)* DoF score11 X 7 X 2=15417 X 21 X 10=3570
# samples 1225
** MAII scorelog2(12/154*10)=-0.359895945086383
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(25/3570*10)=-3.83592407425437
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context (manual curation of fusion genes in FusionPDB)

PubMed: VAT1 [Title/Abstract] AND CTNND1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpoint (based on all fusion genes of FusionGDB 2.0)VAT1(41166624)-CTNND1(57574387), # samples:1
Anticipated loss of major functional domain due to fusion event.VAT1-CTNND1 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
VAT1-CTNND1 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across VAT1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across CTNND1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


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Fusion Gene Sample Information

check buttonFusion gene information from FusionGDB2.0.
check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4SKCMTCGA-ER-A2NE-06AVAT1chr17

41166624

-CTNND1chr11

57574387

+


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Fusion ORF Analysis


check buttonFusion information from ORFfinder translation from full-length transcript sequence from FusionPDB.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000355653VAT1chr1741166624-ENST00000524630CTNND1chr1157574387+68982734961277393
ENST00000355653VAT1chr1741166624-ENST00000529919CTNND1chr1157574387+52892734961277393
ENST00000355653VAT1chr1741166624-ENST00000399039CTNND1chr1157574387+56972734961277393
ENST00000355653VAT1chr1741166624-ENST00000360682CTNND1chr1157574387+65552734961277393
ENST00000355653VAT1chr1741166624-ENST00000361796CTNND1chr1157574387+65312734961277393
ENST00000355653VAT1chr1741166624-ENST00000361391CTNND1chr1157574387+65542734961277393
ENST00000355653VAT1chr1741166624-ENST00000530094CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000428599CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000361332CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000527467CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000415361CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000532245CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000532463CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000528232CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000529986CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000531014CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000358694CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000526772CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000532787CTNND1chr1157574387+65542734961277393
ENST00000355653VAT1chr1741166624-ENST00000533667CTNND1chr1157574387+65542734961277393
ENST00000355653VAT1chr1741166624-ENST00000529873CTNND1chr1157574387+65542734961277393
ENST00000355653VAT1chr1741166624-ENST00000525902CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000529526CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000532649CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000426142CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000532844CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000528621CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000399050CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000526357CTNND1chr1157574387+66172734961277393
ENST00000355653VAT1chr1741166624-ENST00000530748CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000534579CTNND1chr1157574387+65302734961277393
ENST00000355653VAT1chr1741166624-ENST00000526938CTNND1chr1157574387+40062734961277393

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000355653ENST00000524630VAT1chr1741166624-CTNND1chr1157574387+0.0028584740.99714154
ENST00000355653ENST00000529919VAT1chr1741166624-CTNND1chr1157574387+0.0062609990.993739
ENST00000355653ENST00000399039VAT1chr1741166624-CTNND1chr1157574387+0.0042529670.995747
ENST00000355653ENST00000360682VAT1chr1741166624-CTNND1chr1157574387+0.0029675120.9970325
ENST00000355653ENST00000361796VAT1chr1741166624-CTNND1chr1157574387+0.0030631330.9969369
ENST00000355653ENST00000361391VAT1chr1741166624-CTNND1chr1157574387+0.0029891530.9970108
ENST00000355653ENST00000530094VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000428599VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000361332VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000527467VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000415361VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000532245VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000532463VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000528232VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000529986VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000531014VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000358694VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000526772VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000532787VAT1chr1741166624-CTNND1chr1157574387+0.0029891530.9970108
ENST00000355653ENST00000533667VAT1chr1741166624-CTNND1chr1157574387+0.0029891530.9970108
ENST00000355653ENST00000529873VAT1chr1741166624-CTNND1chr1157574387+0.0029891530.9970108
ENST00000355653ENST00000525902VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000529526VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000532649VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000426142VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000532844VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000528621VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000399050VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000526357VAT1chr1741166624-CTNND1chr1157574387+0.0030495320.99695045
ENST00000355653ENST00000530748VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000534579VAT1chr1741166624-CTNND1chr1157574387+0.0030807210.9969193
ENST00000355653ENST00000526938VAT1chr1741166624-CTNND1chr1157574387+0.0069233920.99307656

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Fusion Amino Acid Sequences


check button For individual full-length fusion transcript sequence from FusionPDB, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>FusionGDB ID_FusionGDB isoform ID_FGname_Hgene_Hchr_Hbp_Henst_Tgene_Tchr_Tbp_Tenst_length(fusion AA) seq_BP

>97918_97918_1_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000358694_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_2_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000360682_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_3_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000361332_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_4_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000361391_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_5_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000361796_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_6_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000399039_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_7_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000399050_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_8_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000415361_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_9_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000426142_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_10_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000428599_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_11_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000524630_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_12_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000525902_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_13_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000526357_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_14_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000526772_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_15_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000526938_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_16_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000527467_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_17_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000528232_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_18_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000528621_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_19_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000529526_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_20_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000529873_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_21_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000529919_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_22_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000529986_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_23_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000530094_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_24_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000530748_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_25_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000531014_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_26_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000532245_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_27_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000532463_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_28_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000532649_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_29_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000532787_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_30_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000532844_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_31_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000533667_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

>97918_97918_32_VAT1-CTNND1_VAT1_chr17_41166624_ENST00000355653_CTNND1_chr11_57574387_ENST00000534579_length(amino acids)=393AA_BP=
MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNF
ADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVL
FDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTA
KGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDS

--------------------------------------------------------------

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Fusion Protein Functional Features


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr17:41166624/chr11:57574387)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CTNND1

O60716

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Key regulator of cell-cell adhesion that associates with and regulates the cell adhesion properties of both C-, E- and N-cadherins, being critical for their surface stability (PubMed:14610055, PubMed:20371349). Beside cell-cell adhesion, regulates gene transcription through several transcription factors including ZBTB33/Kaiso2 and GLIS2, and the activity of Rho family GTPases and downstream cytoskeletal dynamics (PubMed:10207085, PubMed:20371349). Implicated both in cell transformation by SRC and in ligand-induced receptor signaling through the EGF, PDGF, CSF-1 and ERBB2 receptors (PubMed:17344476). {ECO:0000269|PubMed:10207085, ECO:0000269|PubMed:14610055, ECO:0000269|PubMed:17344476, ECO:0000269|PubMed:20371349}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919653_693625.3333333333334934.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919700_739625.3333333333334934.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919740_780625.3333333333334934.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919781_826625.3333333333334934.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020653_693631.3333333333334948.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020700_739631.3333333333334948.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020740_780631.3333333333334948.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020781_826631.3333333333334948.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920653_693625.3333333333334963.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920700_739625.3333333333334963.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920740_780625.3333333333334963.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920781_826625.3333333333334963.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919653_693625.3333333333334942.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919700_739625.3333333333334942.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919740_780625.3333333333334942.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919781_826625.3333333333334942.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919653_693625.3333333333334934.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919700_739625.3333333333334934.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919740_780625.3333333333334934.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919781_826625.3333333333334934.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021653_693631.3333333333334969.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021700_739631.3333333333334969.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021740_780631.3333333333334969.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021781_826631.3333333333334969.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819534_573530.3333333333334868.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819583_624530.3333333333334868.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819653_693530.3333333333334868.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819700_739530.3333333333334868.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819740_780530.3333333333334868.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819781_826530.3333333333334868.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717534_573524.3333333333334833.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717583_624524.3333333333334833.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717653_693524.3333333333334833.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717700_739524.3333333333334833.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717740_780524.3333333333334833.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717781_826524.3333333333334833.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818653_693625.3333333333334934.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818700_739625.3333333333334934.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818740_780625.3333333333334934.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818781_826625.3333333333334934.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919653_693625.3333333333334934.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919700_739625.3333333333334934.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919740_780625.3333333333334934.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919781_826625.3333333333334934.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515358_395308.3333333333333617.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515398_437308.3333333333333617.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515441_475308.3333333333333617.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515476_516308.3333333333333617.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515534_573308.3333333333333617.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515583_624308.3333333333333617.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515653_693308.3333333333333617.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515700_739308.3333333333333617.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515740_780308.3333333333333617.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000525902515781_826308.3333333333333617.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819583_624571.3333333333334909.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819653_693571.3333333333334909.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819700_739571.3333333333334909.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819740_780571.3333333333334909.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819781_826571.3333333333334909.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414358_395302.3333333333333611.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414398_437302.3333333333333611.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414441_475302.3333333333333611.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414476_516302.3333333333333611.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414534_573302.3333333333333611.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414583_624302.3333333333333611.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414653_693302.3333333333333611.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414700_739302.3333333333333611.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414740_780302.3333333333333611.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526772414781_826302.3333333333333611.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918653_693631.3333333333334919.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918700_739631.3333333333334919.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918740_780631.3333333333334919.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918781_826631.3333333333334919.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516358_395308.3333333333333646.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516398_437308.3333333333333646.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516441_475308.3333333333333646.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516476_516308.3333333333333646.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516534_573308.3333333333333646.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516583_624308.3333333333333646.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516653_693308.3333333333333646.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516700_739308.3333333333333646.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516740_780308.3333333333333646.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000527467516781_826308.3333333333333646.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818534_573530.3333333333334839.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818583_624530.3333333333334839.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818653_693530.3333333333334839.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818700_739530.3333333333334839.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818740_780530.3333333333334839.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818781_826530.3333333333334839.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818583_624571.3333333333334880.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818653_693571.3333333333334880.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818700_739571.3333333333334880.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818740_780571.3333333333334880.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818781_826571.3333333333334880.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919583_624571.3333333333334880.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919653_693571.3333333333334880.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919700_739571.3333333333334880.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919740_780571.3333333333334880.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919781_826571.3333333333334880.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818583_624571.3333333333334888.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818653_693571.3333333333334888.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818700_739571.3333333333334888.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818740_780571.3333333333334888.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818781_826571.3333333333334888.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717534_573524.3333333333334833.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717583_624524.3333333333334833.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717653_693524.3333333333334833.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717700_739524.3333333333334833.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717740_780524.3333333333334833.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717781_826524.3333333333334833.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718534_573524.3333333333334862.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718583_624524.3333333333334862.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718653_693524.3333333333334862.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718700_739524.3333333333334862.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718740_780524.3333333333334862.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718781_826524.3333333333334862.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919583_624577.3333333333334886.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919653_693577.3333333333334886.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919700_739577.3333333333334886.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919740_780577.3333333333334886.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919781_826577.3333333333334886.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415358_395302.3333333333333640.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415398_437302.3333333333333640.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415441_475302.3333333333333640.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415476_516302.3333333333333640.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415534_573302.3333333333333640.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415583_624302.3333333333333640.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415653_693302.3333333333333640.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415700_739302.3333333333333640.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415740_780302.3333333333333640.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000531014415781_826302.3333333333333640.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616534_573524.3333333333334833.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616583_624524.3333333333334833.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616653_693524.3333333333334833.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616700_739524.3333333333334833.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616740_780524.3333333333334833.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616781_826524.3333333333334833.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717534_573524.3333333333334833.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717583_624524.3333333333334833.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717653_693524.3333333333334833.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717700_739524.3333333333334833.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717740_780524.3333333333334833.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717781_826524.3333333333334833.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919583_624571.3333333333334880.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919653_693571.3333333333334880.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919700_739571.3333333333334880.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919740_780571.3333333333334880.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919781_826571.3333333333334880.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717534_573524.3333333333334841.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717583_624524.3333333333334841.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717653_693524.3333333333334841.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717700_739524.3333333333334841.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717740_780524.3333333333334841.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717781_826524.3333333333334841.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920583_624577.3333333333334915.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920653_693577.3333333333334915.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920700_739577.3333333333334915.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920740_780577.3333333333334915.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920781_826577.3333333333334915.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414358_395302.3333333333333619.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414398_437302.3333333333333619.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414441_475302.3333333333333619.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414476_516302.3333333333333619.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414534_573302.3333333333333619.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414583_624302.3333333333333619.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414653_693302.3333333333333619.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414700_739302.3333333333333619.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414740_780302.3333333333333619.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000533667414781_826302.3333333333333619.0RepeatNote=ARM 10
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919583_624571.3333333333334880.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919653_693571.3333333333334880.0RepeatNote=ARM 7
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919700_739571.3333333333334880.0RepeatNote=ARM 8
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919740_780571.3333333333334880.0RepeatNote=ARM 9
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919781_826571.3333333333334880.0RepeatNote=ARM 10

- Not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneCTNND1chr17:41166624chr11:57574387ENST0000035869491910_46625.3333333333334934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST00000360682102010_46631.3333333333334948.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000036133292010_46625.3333333333334963.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000036139191910_46625.3333333333334942.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000036179691910_46625.3333333333334934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST00000399050102110_46631.3333333333334969.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000041536181910_46530.3333333333334868.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000042614271710_46524.3333333333334833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000042859981810_46625.3333333333334934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052463091910_46625.3333333333334934.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052590251510_46308.3333333333333617.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052635781910_46571.3333333333334909.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052677241410_46302.3333333333333611.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052693891810_46631.3333333333334919.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052746751610_46308.3333333333333646.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052823281810_46530.3333333333334839.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052862181810_46571.3333333333334880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052952691910_46571.3333333333334880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052987381810_46571.3333333333334888.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000052998671710_46524.3333333333334833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053009471810_46524.3333333333334862.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053074891910_46577.3333333333334886.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053101441510_46302.3333333333333640.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053224561610_46524.3333333333334833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053246371710_46524.3333333333334833.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053264991910_46571.3333333333334880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053278771710_46524.3333333333334841.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053284492010_46577.3333333333334915.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053366741410_46302.3333333333333619.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST0000053457991910_46571.3333333333334880.0Coiled coilOntology_term=ECO:0000255
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919358_395625.3333333333334934.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919398_437625.3333333333334934.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919441_475625.3333333333334934.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919476_516625.3333333333334934.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919534_573625.3333333333334934.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000358694919583_624625.3333333333334934.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020358_395631.3333333333334948.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020398_437631.3333333333334948.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020441_475631.3333333333334948.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020476_516631.3333333333334948.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020534_573631.3333333333334948.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST000003606821020583_624631.3333333333334948.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920358_395625.3333333333334963.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920398_437625.3333333333334963.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920441_475625.3333333333334963.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920476_516625.3333333333334963.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920534_573625.3333333333334963.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361332920583_624625.3333333333334963.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919358_395625.3333333333334942.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919398_437625.3333333333334942.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919441_475625.3333333333334942.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919476_516625.3333333333334942.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919534_573625.3333333333334942.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361391919583_624625.3333333333334942.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919358_395625.3333333333334934.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919398_437625.3333333333334934.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919441_475625.3333333333334934.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919476_516625.3333333333334934.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919534_573625.3333333333334934.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000361796919583_624625.3333333333334934.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021358_395631.3333333333334969.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021398_437631.3333333333334969.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021441_475631.3333333333334969.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021476_516631.3333333333334969.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021534_573631.3333333333334969.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST000003990501021583_624631.3333333333334969.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819358_395530.3333333333334868.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819398_437530.3333333333334868.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819441_475530.3333333333334868.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000415361819476_516530.3333333333334868.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717358_395524.3333333333334833.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717398_437524.3333333333334833.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717441_475524.3333333333334833.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000426142717476_516524.3333333333334833.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818358_395625.3333333333334934.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818398_437625.3333333333334934.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818441_475625.3333333333334934.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818476_516625.3333333333334934.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818534_573625.3333333333334934.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000428599818583_624625.3333333333334934.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919358_395625.3333333333334934.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919398_437625.3333333333334934.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919441_475625.3333333333334934.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919476_516625.3333333333334934.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919534_573625.3333333333334934.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000524630919583_624625.3333333333334934.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819358_395571.3333333333334909.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819398_437571.3333333333334909.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819441_475571.3333333333334909.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819476_516571.3333333333334909.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526357819534_573571.3333333333334909.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918358_395631.3333333333334919.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918398_437631.3333333333334919.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918441_475631.3333333333334919.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918476_516631.3333333333334919.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918534_573631.3333333333334919.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000526938918583_624631.3333333333334919.0RepeatNote=ARM 6
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818358_395530.3333333333334839.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818398_437530.3333333333334839.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818441_475530.3333333333334839.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528232818476_516530.3333333333334839.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818358_395571.3333333333334880.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818398_437571.3333333333334880.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818441_475571.3333333333334880.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818476_516571.3333333333334880.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000528621818534_573571.3333333333334880.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919358_395571.3333333333334880.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919398_437571.3333333333334880.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919441_475571.3333333333334880.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919476_516571.3333333333334880.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529526919534_573571.3333333333334880.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818358_395571.3333333333334888.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818398_437571.3333333333334888.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818441_475571.3333333333334888.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818476_516571.3333333333334888.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529873818534_573571.3333333333334888.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717358_395524.3333333333334833.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717398_437524.3333333333334833.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717441_475524.3333333333334833.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000529986717476_516524.3333333333334833.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718358_395524.3333333333334862.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718398_437524.3333333333334862.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718441_475524.3333333333334862.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530094718476_516524.3333333333334862.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919358_395577.3333333333334886.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919398_437577.3333333333334886.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919441_475577.3333333333334886.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919476_516577.3333333333334886.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000530748919534_573577.3333333333334886.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616358_395524.3333333333334833.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616398_437524.3333333333334833.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616441_475524.3333333333334833.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532245616476_516524.3333333333334833.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717358_395524.3333333333334833.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717398_437524.3333333333334833.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717441_475524.3333333333334833.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532463717476_516524.3333333333334833.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919358_395571.3333333333334880.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919398_437571.3333333333334880.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919441_475571.3333333333334880.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919476_516571.3333333333334880.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532649919534_573571.3333333333334880.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717358_395524.3333333333334841.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717398_437524.3333333333334841.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717441_475524.3333333333334841.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532787717476_516524.3333333333334841.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920358_395577.3333333333334915.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920398_437577.3333333333334915.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920441_475577.3333333333334915.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920476_516577.3333333333334915.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000532844920534_573577.3333333333334915.0RepeatNote=ARM 5
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919358_395571.3333333333334880.0RepeatNote=ARM 1
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919398_437571.3333333333334880.0RepeatNote=ARM 2
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919441_475571.3333333333334880.0RepeatNote=ARM 3
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919476_516571.3333333333334880.0RepeatNote=ARM 4
TgeneCTNND1chr17:41166624chr11:57574387ENST00000534579919534_573571.3333333333334880.0RepeatNote=ARM 5


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Fusion Protein-Protein Interaction


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type from validated records (BIOGRID-3.4.160)
GenePPI interactors


check button Protein-protein interactors based on sequence similarity (STRING)
GeneSTRING network
VAT1
CTNND1


check button - Retained interactions in fusion protein (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost interactions due to fusion (protein functional feature from UniProt).
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs to VAT1-CTNND1


check button Drugs used for this fusion-positive patient.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDrugSourcePMID

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Related Diseases to VAT1-CTNND1


check button Diseases that have this fusion gene.
(Manual curation of PubMed, 04-30-2022 + MyCancerGenome)
HgeneTgeneDiseaseSourcePMID

check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource