![]() |
||||||
|
Translation Factor: SYNCRIP (NCBI Gene ID:10492) |
|
![]() |
Gene Information | Gene Name: SYNCRIP | Gene ID: 10492 | Gene Symbol | SYNCRIP | Gene ID | 10492 |
Gene Name | synaptotagmin binding cytoplasmic RNA interacting protein | |
Synonyms | GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q | |
Cytomap | 6q14.3 | |
Type of Gene | protein-coding | |
Description | heterogeneous nuclear ribonucleoprotein QNS1-associated protein 1glycine- and tyrosine-rich RNA-binding protein | |
Modification date | 20200327 | |
UniProtAcc | O60506 |
![]() |
GO ID | GO term |
GO:0017148 | Negative regulation of translation |
GO:0006417 | Regulation of translation |
GO:0045727 | Positive regulation of translation |
GO:0002181 | Cytoplasmic translation |
GO:0006412 | Translation |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SYNCRIP | GO:0017148 | negative regulation of translation | 23071094 |
Hgene | SYNCRIP | GO:0071346 | cellular response to interferon-gamma | 15479637 |
![]() |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
SYNCRIP | (733 - 1119.25] |
Top |
|
![]() |
Gene | Title | PMID |
SYNCRIP | SYNCRIP, a component of dendritically localized mRNPs, binds to the translation regulator BC200 RNA | 18045242 |
Top |
|
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
![]() |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000369622 | 86328985 | 86329135 | In-frame |
ENST00000369622 | 86333694 | 86333830 | Frame-shift |
ENST00000369622 | 86346684 | 86346861 | In-frame |
ENST00000369622 | 86346960 | 86347074 | In-frame |
ENST00000369622 | 86351009 | 86351169 | 3UTR-3CDS |
![]() |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
ENST00000369622 | 86328985 | 86329135 | 3040 | 1510 | 1659 | 623 | 336 | 386 |
ENST00000369622 | 86346684 | 86346861 | 3040 | 991 | 1167 | 623 | 163 | 222 |
ENST00000369622 | 86346960 | 86347074 | 3040 | 877 | 990 | 623 | 125 | 163 |
![]() |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
Top |
|
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
![]() |
Cancer type | Translation factor | FC | adj.pval |
STAD | SYNCRIP | -3.24695040489934 | 0.00222697434946895 |
THCA | SYNCRIP | -3.15946429809988 | 2.46790521879123e-10 |
Top |
|
![]() |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
BRCA | SYNCRIP | hsa-miR-196b-5p | 88 | 0.307546251217137 | 0.00601593831679952 |
![]() |
![]() |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
![]() |
![]() |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
![]() |
![]() |
Cancer type | Gene | Coefficient | Pvalue |
KIRC | SYNCRIP | 0.036176445 | 0.017847429 |
LIHC | SYNCRIP | 0.07895802 | 0.037502156 |
MESO | SYNCRIP | -0.074594402 | 0.047141413 |
Top |
|
![]() |
![]() |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
CHOL | IUPHAR | SYNCRIP | SENP6 | 0.801124691 | 3.87E-11 |
KICH | Cell metabolism gene | SYNCRIP | NUP153 | 0.82960136 | 3.02E-24 |
KICH | CGC | SYNCRIP | CDK12 | 0.811730097 | 1.69E-22 |
KICH | IUPHAR | SYNCRIP | CDK12 | 0.811730097 | 1.69E-22 |
KICH | Kinase | SYNCRIP | CDK12 | 0.811730097 | 1.69E-22 |
PRAD | CGC | SYNCRIP | GOPC | 0.819356501 | 1.60E-134 |
PRAD | CGC | SYNCRIP | BCLAF1 | 0.836132497 | 4.90E-145 |
PRAD | Epifactor | SYNCRIP | HDAC2 | 0.801884866 | 1.13E-124 |
PRAD | Epifactor | SYNCRIP | MAP3K7 | 0.837866862 | 3.43E-146 |
PRAD | IUPHAR | SYNCRIP | HDAC2 | 0.801884866 | 1.13E-124 |
PRAD | IUPHAR | SYNCRIP | TMEM30A | 0.81232519 | 1.96E-130 |
PRAD | IUPHAR | SYNCRIP | SENP6 | 0.812692903 | 1.21E-130 |
PRAD | IUPHAR | SYNCRIP | MAP3K7 | 0.837866862 | 3.43E-146 |
PRAD | Kinase | SYNCRIP | MAP3K7 | 0.837866862 | 3.43E-146 |
PRAD | TF | SYNCRIP | CDC5L | 0.805857765 | 7.98E-127 |
THYM | Cell metabolism gene | SYNCRIP | CCNC | 0.804664968 | 6.09E-29 |
THYM | Cell metabolism gene | SYNCRIP | AGPS | 0.830929879 | 2.42E-32 |
THYM | Cell metabolism gene | SYNCRIP | NFYA | 0.871615598 | 5.80E-39 |
THYM | CGC | SYNCRIP | GOPC | 0.800635929 | 1.82E-28 |
THYM | CGC | SYNCRIP | CCNC | 0.804664968 | 6.09E-29 |
THYM | CGC | SYNCRIP | CREB1 | 0.808550274 | 2.07E-29 |
THYM | CGC | SYNCRIP | RAD21 | 0.80891123 | 1.87E-29 |
THYM | CGC | SYNCRIP | SUZ12 | 0.81453594 | 3.72E-30 |
THYM | CGC | SYNCRIP | FANCF | 0.818382888 | 1.19E-30 |
THYM | CGC | SYNCRIP | FGFR1OP | 0.826606521 | 9.62E-32 |
THYM | CGC | SYNCRIP | MSH2 | 0.83909927 | 1.61E-33 |
THYM | CGC | SYNCRIP | DEK | 0.844971119 | 2.08E-34 |
THYM | CGC | SYNCRIP | CBL | 0.850651844 | 2.64E-35 |
THYM | Epifactor | SYNCRIP | ATAD2B | 0.803791912 | 7.74E-29 |
THYM | Epifactor | SYNCRIP | SENP1 | 0.808870336 | 1.89E-29 |
THYM | Epifactor | SYNCRIP | RCOR1 | 0.813002279 | 5.80E-30 |
THYM | Epifactor | SYNCRIP | SUZ12 | 0.81453594 | 3.72E-30 |
THYM | Epifactor | SYNCRIP | ZNF711 | 0.820023056 | 7.30E-31 |
THYM | Epifactor | SYNCRIP | ING3 | 0.830970389 | 2.39E-32 |
THYM | Epifactor | SYNCRIP | DR1 | 0.838771269 | 1.80E-33 |
THYM | Epifactor | SYNCRIP | DEK | 0.844971119 | 2.08E-34 |
THYM | Epifactor | SYNCRIP | MBTD1 | 0.848525376 | 5.77E-35 |
THYM | IUPHAR | SYNCRIP | ATAD2B | 0.803791912 | 7.74E-29 |
THYM | IUPHAR | SYNCRIP | CRY1 | 0.804313469 | 6.71E-29 |
THYM | IUPHAR | SYNCRIP | SENP1 | 0.808870336 | 1.89E-29 |
THYM | IUPHAR | SYNCRIP | SRPK2 | 0.81683234 | 1.89E-30 |
THYM | IUPHAR | SYNCRIP | OXSR1 | 0.817663111 | 1.48E-30 |
THYM | IUPHAR | SYNCRIP | HIPK1 | 0.827460218 | 7.35E-32 |
THYM | Kinase | SYNCRIP | SRPK2 | 0.81683234 | 1.89E-30 |
THYM | Kinase | SYNCRIP | OXSR1 | 0.817663111 | 1.48E-30 |
THYM | Kinase | SYNCRIP | HIPK1 | 0.827460218 | 7.35E-32 |
THYM | TF | SYNCRIP | ZNF143 | 0.807744636 | 2.59E-29 |
THYM | TF | SYNCRIP | CREB1 | 0.808550274 | 2.07E-29 |
THYM | TF | SYNCRIP | E2F7 | 0.810732168 | 1.11E-29 |
THYM | TF | SYNCRIP | ZNF280D | 0.815081693 | 3.17E-30 |
THYM | TF | SYNCRIP | ZKSCAN4 | 0.819619356 | 8.25E-31 |
THYM | TF | SYNCRIP | ZNF711 | 0.820023056 | 7.30E-31 |
THYM | TF | SYNCRIP | ZBTB2 | 0.826784116 | 9.10E-32 |
THYM | TF | SYNCRIP | CGGBP1 | 0.827445801 | 7.38E-32 |
THYM | TF | SYNCRIP | ZNF184 | 0.837293107 | 2.97E-33 |
THYM | TF | SYNCRIP | DR1 | 0.838771269 | 1.80E-33 |
THYM | TF | SYNCRIP | ZNF519 | 0.854027047 | 7.45E-36 |
THYM | TF | SYNCRIP | NFYA | 0.871615598 | 5.80E-39 |
THYM | TF | SYNCRIP | CDC5L | 0.874288415 | 1.78E-39 |
THYM | TF | SYNCRIP | HSF2 | 0.876319735 | 7.15E-40 |
THYM | TSG | SYNCRIP | CCNC | 0.804664968 | 6.09E-29 |
THYM | TSG | SYNCRIP | SUZ12 | 0.81453594 | 3.72E-30 |
THYM | TSG | SYNCRIP | ING3 | 0.830970389 | 2.39E-32 |
THYM | TSG | SYNCRIP | MSH2 | 0.83909927 | 1.61E-33 |
THYM | TSG | SYNCRIP | CBL | 0.850651844 | 2.64E-35 |
THYM | TSG | SYNCRIP | LIN9 | 0.860736978 | 5.45E-37 |
UCS | Cell metabolism gene | SYNCRIP | CCNC | 0.804664968 | 6.09E-29 |
UCS | Cell metabolism gene | SYNCRIP | AGPS | 0.830929879 | 2.42E-32 |
UCS | Cell metabolism gene | SYNCRIP | NFYA | 0.871615598 | 5.80E-39 |
UCS | CGC | SYNCRIP | GOPC | 0.800635929 | 1.82E-28 |
UCS | CGC | SYNCRIP | CCNC | 0.804664968 | 6.09E-29 |
UCS | CGC | SYNCRIP | CREB1 | 0.808550274 | 2.07E-29 |
UCS | CGC | SYNCRIP | RAD21 | 0.80891123 | 1.87E-29 |
UCS | CGC | SYNCRIP | SUZ12 | 0.81453594 | 3.72E-30 |
UCS | CGC | SYNCRIP | FANCF | 0.818382888 | 1.19E-30 |
UCS | CGC | SYNCRIP | FGFR1OP | 0.826606521 | 9.62E-32 |
UCS | CGC | SYNCRIP | MSH2 | 0.83909927 | 1.61E-33 |
UCS | CGC | SYNCRIP | DEK | 0.844971119 | 2.08E-34 |
UCS | CGC | SYNCRIP | CBL | 0.850651844 | 2.64E-35 |
UCS | Epifactor | SYNCRIP | ATAD2B | 0.803791912 | 7.74E-29 |
UCS | Epifactor | SYNCRIP | SENP1 | 0.808870336 | 1.89E-29 |
UCS | Epifactor | SYNCRIP | RCOR1 | 0.813002279 | 5.80E-30 |
UCS | Epifactor | SYNCRIP | SUZ12 | 0.81453594 | 3.72E-30 |
UCS | Epifactor | SYNCRIP | ZNF711 | 0.820023056 | 7.30E-31 |
UCS | Epifactor | SYNCRIP | ING3 | 0.830970389 | 2.39E-32 |
UCS | Epifactor | SYNCRIP | DR1 | 0.838771269 | 1.80E-33 |
UCS | Epifactor | SYNCRIP | DEK | 0.844971119 | 2.08E-34 |
UCS | Epifactor | SYNCRIP | MBTD1 | 0.848525376 | 5.77E-35 |
UCS | IUPHAR | SYNCRIP | ATAD2B | 0.803791912 | 7.74E-29 |
UCS | IUPHAR | SYNCRIP | CRY1 | 0.804313469 | 6.71E-29 |
UCS | IUPHAR | SYNCRIP | SENP1 | 0.808870336 | 1.89E-29 |
UCS | IUPHAR | SYNCRIP | SRPK2 | 0.81683234 | 1.89E-30 |
UCS | IUPHAR | SYNCRIP | OXSR1 | 0.817663111 | 1.48E-30 |
UCS | IUPHAR | SYNCRIP | HIPK1 | 0.827460218 | 7.35E-32 |
UCS | Kinase | SYNCRIP | SRPK2 | 0.81683234 | 1.89E-30 |
UCS | Kinase | SYNCRIP | OXSR1 | 0.817663111 | 1.48E-30 |
UCS | Kinase | SYNCRIP | HIPK1 | 0.827460218 | 7.35E-32 |
UCS | TF | SYNCRIP | ZNF143 | 0.807744636 | 2.59E-29 |
UCS | TF | SYNCRIP | CREB1 | 0.808550274 | 2.07E-29 |
UCS | TF | SYNCRIP | E2F7 | 0.810732168 | 1.11E-29 |
UCS | TF | SYNCRIP | ZNF280D | 0.815081693 | 3.17E-30 |
UCS | TF | SYNCRIP | ZKSCAN4 | 0.819619356 | 8.25E-31 |
UCS | TF | SYNCRIP | ZNF711 | 0.820023056 | 7.30E-31 |
UCS | TF | SYNCRIP | ZBTB2 | 0.826784116 | 9.10E-32 |
UCS | TF | SYNCRIP | CGGBP1 | 0.827445801 | 7.38E-32 |
UCS | TF | SYNCRIP | ZNF184 | 0.837293107 | 2.97E-33 |
UCS | TF | SYNCRIP | DR1 | 0.838771269 | 1.80E-33 |
UCS | TF | SYNCRIP | ZNF519 | 0.854027047 | 7.45E-36 |
UCS | TF | SYNCRIP | NFYA | 0.871615598 | 5.80E-39 |
UCS | TF | SYNCRIP | CDC5L | 0.874288415 | 1.78E-39 |
UCS | TF | SYNCRIP | HSF2 | 0.876319735 | 7.15E-40 |
UCS | TSG | SYNCRIP | CCNC | 0.804664968 | 6.09E-29 |
UCS | TSG | SYNCRIP | SUZ12 | 0.81453594 | 3.72E-30 |
UCS | TSG | SYNCRIP | ING3 | 0.830970389 | 2.39E-32 |
UCS | TSG | SYNCRIP | MSH2 | 0.83909927 | 1.61E-33 |
UCS | TSG | SYNCRIP | CBL | 0.850651844 | 2.64E-35 |
UCS | TSG | SYNCRIP | LIN9 | 0.860736978 | 5.45E-37 |
UVM | Cell metabolism gene | SYNCRIP | NUP43 | 0.822399965 | 8.52E-21 |
UVM | Cell metabolism gene | SYNCRIP | AGPAT5 | 0.830681422 | 1.56E-21 |
UVM | Cell metabolism gene | SYNCRIP | MED23 | 0.843460093 | 9.47E-23 |
UVM | Cell metabolism gene | SYNCRIP | PGM3 | 0.858445073 | 2.52E-24 |
UVM | CGC | SYNCRIP | FGFR1OP | 0.820149599 | 1.33E-20 |
UVM | CGC | SYNCRIP | GOPC | 0.82255796 | 8.25E-21 |
UVM | CGC | SYNCRIP | BCLAF1 | 0.823012472 | 7.54E-21 |
UVM | Epifactor | SYNCRIP | HDAC2 | 0.858030695 | 2.80E-24 |
UVM | IUPHAR | SYNCRIP | HDAC2 | 0.858030695 | 2.80E-24 |
UVM | TF | SYNCRIP | ZBTB2 | 0.8114723 | 7.00E-20 |
UVM | TF | SYNCRIP | ZUFSP | 0.855482449 | 5.33E-24 |
Top |
|
![]() Visit iCn3D. |
Top |
|
![]() * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
![]() |
![]() |
![]() |
![]() * Edge colors based on TCGA cancer types. |
![]() |
![]() |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KICH | SYNCRIP | HNRNPR | 1.52076151408335 | 0.000102996826171875 |
COAD | SYNCRIP | HNRNPU | -3.25414367586013 | 0.000109195709228516 |
STAD | SYNCRIP | HNRNPR | -4.6225661308416 | 0.000364991836249828 |
KICH | SYNCRIP | HNRNPU | 1.45270865891102 | 0.000376403331756592 |
LUAD | SYNCRIP | HNRNPA1 | -1.17680399824906 | 0.000379797766386831 |
PRAD | SYNCRIP | HNRNPU | -3.59255010200453 | 0.00074054058184854 |
STAD | SYNCRIP | EPRS | -1.48171581324647 | 0.000789262883452143 |
THCA | SYNCRIP | RPL13A | 1.00055529557489 | 0.00121938003080576 |
ESCA | SYNCRIP | HNRNPR | -4.72271799081977 | 0.0029296875 |
THCA | SYNCRIP | HNRNPK | -8.73422542563389 | 0.00797530353045887 |
CHOL | SYNCRIP | HNRNPR | -1.46566948767376 | 0.01171875 |
LUSC | SYNCRIP | CSDE1 | -1.33200117661228 | 0.025379830388344 |
CHOL | SYNCRIP | GAPDH | -3.07354785261475 | 0.02734375 |
UCEC | SYNCRIP | HNRNPK | 1.64532744504864 | 0.03125 |
KIRC | SYNCRIP | RPL13A | -2.22570045477256 | 1.02382991067149e-08 |
BRCA | SYNCRIP | GAPDH | -1.37642902567885 | 1.15182974050406e-18 |
HNSC | SYNCRIP | CSDE1 | -1.92574762956205 | 1.42088565553422e-05 |
THCA | SYNCRIP | CSDE1 | -1.00581945790421 | 1.55171507174296e-05 |
BRCA | SYNCRIP | CSDE1 | -1.23575001565702 | 1.5698167165288e-21 |
STAD | SYNCRIP | HNRNPU | -1.26566952320815 | 2.26888805627823e-05 |
LIHC | SYNCRIP | EPRS | -7.10731017811505 | 2.28054594243154e-08 |
LIHC | SYNCRIP | HNRNPU | -1.06098658215773 | 2.35319665208461e-06 |
BRCA | SYNCRIP | YBX1 | 1.10467241966451 | 4.8741280959683e-05 |
KIRC | SYNCRIP | HNRNPR | 1.79418191557745 | 5.98807464268008e-07 |
KIRC | SYNCRIP | HNRNPA1 | -6.80688842701016 | 6.00852501097204e-09 |
LUAD | SYNCRIP | CSDE1 | -1.92573954016457 | 6.46801743847803e-05 |
BRCA | SYNCRIP | IGF2BP1 | -1.119264636586 | 6.55843695441879e-13 |
LUAD | SYNCRIP | GAPDH | -2.39625242862964 | 7.0750762948169e-11 |
KICH | SYNCRIP | YBX1 | 1.86923259160472 | 8.16583633422851e-06 |
LUSC | SYNCRIP | HNRNPA1 | -2.597423841764 | 9.46872220956927e-06 |
PRAD | SYNCRIP | EPRS | -1.76339127457265 | 9.52775218277559e-05 |
![]() |
PPI interactors with SYNCRIP |
PTPN11, PUF60, PRKRA, STK24, CNBP, PRMT1, APOBEC1, A1CF, SYT2, SYT7, SYT8, SYT9, SYT1, SYT3, SYT4, GRB2, PLCG1, INSR, MEPCE, CDK9, HNRNPA1, HNRNPH1, KHDRBS2, DOT1L, H2AFX, UBC, Ybx1, AI837181, EBNA-LP, RAD21, SF3A2, SIRT7, PAIP1, CUL3, CUL4B, CUL5, CUL2, CUL1, COPS5, COPS6, DCUN1D1, CAND1, NEDD8, HNRNPD, APP, PABPC1, HNRNPR, HNRNPA3, SRSF1, HNRNPK, HNRNPM, SRSF3, TARDBP, YBX1, ILF3, ILF2, DHX15, SNRPA1, DDX5, RALY, SRRM2, U2AF1, PPP1CA, U2AF2, SNRNP70, DDX42, DDX3X, EIF4H, IGF2BP1, PHB, PTCD3, RPL10, RBMS2, STT3B, WBSCR16, TIMM50, HNRNPA0, NDUFV2, LSM14A, IKBIP, ICT1, MYL12A, STOML2, PLP2, LETM1, RPUSD4, RPN1, SNAP23, DLAT, GAA, TMEM177, LGALS3BP, TXN, MRPS28, RPS20, ESR1, HABP4, SMURF1, FN1, VCAM1, HNRNPU, TP63, IL7R, UBL4A, ITGA4, PRMT8, CD81, IGSF8, ICAM1, HMGA1, HMGA2, CSF2, FBXO6, PARK2, IQGAP1, C14orf166, NELFB, FKBP3, GNB2L1, IARS, RPSA, MAP1S, PSMD7, RPL23A, RPL24, RPS21, RPS27L, rev, RPA3, RPA2, RPA1, STAU1, SPRTN, FUS, NUPR1, CUL7, OBSL1, CCDC8, EED, RNF2, SIRT6, FBXW11, MAEL, DDX17, MORF4L1, MORF4L2, NHP2L1, CAPN1, HNRNPL, KHDRBS1, KHDRBS3, LSM4, LUC7L, LUC7L2, METTL13, NCBP2, SF3B3, THUMPD1, UBE2S, UPF1, XRN1, ZNF598, NTRK1, SCARNA22, APBB2, BAD, BLMH, SLC25A20, CRY1, DKC1, DYNC1H1, ECHS1, PHC2, EIF2B1, CTTN, MTOR, GOLGA3, HBA1, HEXA, HNRNPAB, MAPT, MAP3K4, MKI67, MYH1, NDUFB5, NHS, NOP2, PDCL, PI4KA, PLCB3, PSMD2, PTMA, RECQL, RET, SCO1, SDC2, SS18, TARBP1, ZEB1, GCFC2, TLN1, TNFRSF1A, USP1, ZBTB14, RBM10, USP13, MTA1, PTTG1, COX5A, MRPL33, GTF2IRD1, ARHGAP32, C2CD5, HMGXB4, CEBPZ, SORBS3, TCIRG1, ABCA7, TUBB3, CDK2, HNRNPH2, PCDH7, SORT1, TSNAX, KIF21B, MRPL50, TXNL4A, EBNA1BP2, TRIOBP, HNRNPUL1, FNDC3A, SETD1B, FAM120A, MED13L, DICER1, MACF1, INTS7, TBC1D10B, WDR91, ANKRD11, RACGAP1, PNPLA8, RRP15, TRMT112, PPIL1, PPIL3, APTX, UHRF1BP1, UACA, CEP55, NAT10, UFSP2, DNAJA4, NOP10, PLXNA3, PRPF40A, BIN3, DDX24, ZNF286A, UVSSA, ICE2, IPO4, ELMO3, SBF2, TLN2, KLF16, USP32, FBXO18, SLC25A25, PTGR2, CENPV, LEMD2, NSMCE2, Junb, Nedd1, Nfyc, MCM2, MCM5, SNW1, WWP2, ZNF746, RBMXL1, ANGEL2, RPS27A, APOBEC3D, SFPQ, YTHDF1, HDLBP, RPL26L1, ZNF169, ELAVL4, DUSP11, ZC3H8, KNOP1, DDX54, CCDC137, DDX21, ZRANB2, GAR1, UTP3, QKI, CCDC59, DDX27, ELAVL2, NKAP, YPEL5, CYLD, TRIM25, G3BP1, UBE2A, BRCA1, HBP1, WDR77, CTNNB1, PPIE, YAP1, BMP4, HDAC4, KRAS, PCBP1, TRIP4, UBE2L6, UBE2M, PRPF8, EFTUD2, AAR2, PIH1D1, TNIP2, CHD3, CHD4, TNF, RIOK1, HEXIM1, LARP7, RUNX1, UBE3A, SNAI1, HRAS, AGR2, RECQL4, GPC1, REST, ZFP36L2, MYC, WDR76, HIST1H4A, HIST1H2BB, HIST1H2AB, METTL3, METTL14, KIAA1429, RC3H1, RC3H2, FAF1, CHEK2, DISC1, USP14, NR2C2, HDAC2, MECOM, NHLRC2, VRK1, OASL, MAB21L2, DUSP14, TAF15, MATR3, ITFG1, BIRC3, NFX1, BRD7, TP53, GRIA4, GRIA1, CMTR1, MYPOP, ARIH2, PLEKHA4, KCTD10, PINK1, TFCP2, FANCD2, MIRLET7A1, MIRLET7A2, MIRLET7A3, MIRLET7B, MIRLET7C, MIRLET7D, MIRLET7E, MIRLET7F1, MIRLET7F2, MIRLET7G, MIRLET7I, MIR98, MIR1-1, MIR1-2, MIR7-1, MIR7-2, MIR7-3, MIR9-1, MIR9-2, MIR9-3, MIR10B, MIR15A, MIR15B, MIR16-1, MIR16-2, MIR17, MIR18A, MIR18B, MIR19A, MIR19B1, MIR19B2, MIR20A, MIR20B, MIR21, MIR25, MIR29A, MIR29B1, MIR29B2, MIR29C, MIR31, MIR34A, MIR34B, MIR34C, MIR92A1, MIR92A2, MIR93, MIR106A, MIR106B, MIR107, MIR122, MIR128-1, MIR128-2, MIR138-1, MIR138-2, MIR140, MIR141, MIR143, MIR145, MIR155, MIR199A1, MIR199A2, MIR200A, MIR200B, MIR200C, MIR205, MIR206, MIR214, MIR221, MIR222, MIR363, MIR429, MIR451A, ZC3H18, DUSP1, TOR1AIP1, PKD1L2, CELF1, CPEB4, DAZL, ELAVL1, FUBP3, GRSF1, IGF2BP2, LARP4B, MKRN2, MOV10, PAIP2, PUM1, RBMS1, AIFM1, ALG13, ATXN2, BYSL, CSDE1, DDX20, EIF4ENIF1, FAM120C, GEMIN4, IGF2BP3, IPO8, OTUD4, PRRC2C, R3HDM1, SMG7, SMN1, SND1, TDRD3, TOP3B, YTHDF2, ZCCHC6, XRN2, ZC3HAV1, ANKRD28, DAP3, G3BP2, LARP4, LTV1, MRPS26, PABPC4, CAPRIN1, FMR1, PRRC2A, PRRC2B, SECISBP2, STAU2, YTHDF3, DHX57, LARP1B, MRPS34, ZC3H7A, NEK4, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, TRIM55, TRIM63, ACAD9, C6orf203, MDH2, METTL15, METTL17, MRRF, MTERF3, MTIF3, TUFM, SUMO2, NDN, BRD4, RBM45, CIC, Apc2, RBM39, FBP1, MKRN1, LGALS9, IFI16, N, FAM20C, DNAJC8, EWSR1, OGT, CD274, UFL1, DDRGK1, NR4A1, KIAA1524, FBL, SERBP1, TRIM37, UBQLN1, FZR1, WDR5, NUDCD2, ZBTB2, PRR3, RBM28, RPS3, DHX36, MRPL30, PURG, HNRNPUL2, YTHDC2, HNRNPC, MRPS24, MALSU1, YBX2, SNRPC, GAPDHS, GNA13, BTF3, FBXW7, ORF8, ORF10, ORF6, ORF7b, S, AGO1, SQSTM1, PER2, CPEB1, RB1CC1, |
Top |
|
![]() |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
SYNCRIP | chr6 | 86324772 | TG | AA | Indel | association | Autism_spectrum_disorder | SO:0001583|missense_variant | SO:0001583|missense_variant |
SYNCRIP | chr6 | 86324785 | C | T | single_nucleotide_variant | Uncertain_significance | Intellectual_disability | SO:0001583|missense_variant | SO:0001583|missense_variant |
SYNCRIP | chr6 | 86328600 | CA | C | Deletion | Uncertain_significance | not_provided | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
SYNCRIP | chr6 | 86332348 | CCT | C | Microsatellite | Likely_pathogenic | not_provided | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
SYNCRIP | chr6 | 86332353 | G | GT | Duplication | Uncertain_significance | not_provided | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
SYNCRIP | chr6 | 86346722 | A | G | single_nucleotide_variant | association | Autism_spectrum_disorder | SO:0001583|missense_variant | SO:0001583|missense_variant |
SYNCRIP | chr6 | 86346961 | C | G | single_nucleotide_variant | Uncertain_significance | not_provided | SO:0001583|missense_variant,SO:0001627|intron_variant | SO:0001583|missense_variant,SO:0001627|intron_variant |
SYNCRIP | chr6 | 86351111 | T | C | single_nucleotide_variant | Uncertain_significance | See_cases | SO:0001583|missense_variant,SO:0001627|intron_variant | SO:0001583|missense_variant,SO:0001627|intron_variant |
![]() |
![]() |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
SYNCRIP | SKCM | chr6 | 86333812 | 86333812 | G | A | Missense_Mutation | p.R229C | 5 |
SYNCRIP | UCEC | chr6 | 86332381 | 86332381 | T | C | Missense_Mutation | p.Y276C | 3 |
SYNCRIP | LUSC | chr6 | 86324913 | 86324913 | C | T | Missense_Mutation | p.R478H | 3 |
SYNCRIP | UCEC | chr6 | 86350171 | 86350171 | T | C | Missense_Mutation | p.H87R | 3 |
SYNCRIP | GBM | chr6 | 86329023 | 86329023 | G | T | Missense_Mutation | 3 | |
SYNCRIP | BRCA | chr6 | 86350199 | 86350199 | G | A | Nonsense_Mutation | p.Q78* | 3 |
SYNCRIP | BRCA | chr6 | 86351074 | 86351074 | C | T | Silent | p.Q28 | 3 |
SYNCRIP | KIRP | chr6 | 86332353 | 86332354 | - | T | Frame_Shift_Ins | p.N285fs | 3 |
SYNCRIP | HNSC | chr6 | 86328538 | 86328538 | T | C | Silent | p.Q426Q | 3 |
SYNCRIP | SARC | chr6 | 86329023 | 86329023 | G | A | Missense_Mutation | p.A374V | 3 |
SYNCRIP | ESCA | chr6 | 86324929 | 86324929 | C | G | Missense_Mutation | p.D473H | 3 |
SYNCRIP | PAAD | chr6 | 86346734 | 86346734 | G | A | Missense_Mutation | p.A206V | 3 |
SYNCRIP | SKCM | chr6 | 86324795 | 86324795 | G | A | Silent | p.P419P | 2 |
SYNCRIP | TGCT | chr6 | 86346826 | 86346826 | C | T | Silent | 2 | |
SYNCRIP | ESCA | chr6 | 86324929 | 86324929 | C | G | Missense_Mutation | 2 | |
SYNCRIP | HNSC | chr6 | 86346765 | 86346765 | C | G | Missense_Mutation | p.D196H | 2 |
SYNCRIP | STAD | chr6 | 86349994 | 86349994 | T | C | Missense_Mutation | p.K107R | 2 |
SYNCRIP | CHOL | chr6 | 86351134 | 86351134 | T | C | Silent | 2 | |
SYNCRIP | TGCT | chr6 | 86346826 | 86346826 | C | T | Silent | p.E175E | 2 |
SYNCRIP | BRCA | chr6 | 86332254 | 86332254 | T | C | Silent | p.G318 | 2 |
SYNCRIP | PRAD | chr6 | 86333756 | 86333756 | C | A | Silent | p.V247V | 2 |
SYNCRIP | CHOL | chr6 | 86351134 | 86351134 | T | C | Silent | p.G8G | 2 |
SYNCRIP | STAD | chr6 | 86332354 | 86332354 | T | - | Frame_Shift_Del | 2 | |
SYNCRIP | STAD | chr6 | 86346762 | 86346762 | G | A | Missense_Mutation | p.P197S | 2 |
SYNCRIP | UCEC | chr6 | 86324967 | 86324967 | T | C | Missense_Mutation | p.Y460C | 2 |
SYNCRIP | STAD | chr6 | 86324913 | 86324913 | C | T | Missense_Mutation | 2 | |
SYNCRIP | STAD | chr6 | 86332298 | 86332298 | G | A | Missense_Mutation | p.R304C | 2 |
SYNCRIP | UCEC | chr6 | 86328993 | 86328993 | G | T | Missense_Mutation | p.A384D | 2 |
SYNCRIP | LUAD | chr6 | 86325015 | 86325015 | C | G | Missense_Mutation | p.R444T | 2 |
SYNCRIP | CESC | chr6 | 86324782 | 86324782 | C | T | Missense_Mutation | 2 | |
SYNCRIP | UCEC | chr6 | 86329047 | 86329047 | C | T | Missense_Mutation | p.R366Q | 2 |
SYNCRIP | STAD | chr6 | 86329028 | 86329028 | A | T | Missense_Mutation | p.D372E | 2 |
SYNCRIP | CESC | chr6 | 86324900 | 86324900 | T | C | Silent | 2 | |
SYNCRIP | UCEC | chr6 | 86329085 | 86329085 | A | C | Missense_Mutation | p.I353M | 2 |
SYNCRIP | CESC | chr6 | 86324748 | 86324748 | C | G | Missense_Mutation | 2 | |
SYNCRIP | SARC | chr6 | 86333723 | 86333723 | C | G | Missense_Mutation | 2 | |
SYNCRIP | UCEC | chr6 | 86332391 | 86332391 | C | T | Missense_Mutation | p.V273I | 2 |
SYNCRIP | LIHC | chr6 | 86328565 | 86328565 | T | - | Frame_Shift_Del | p.K417fs | 2 |
SYNCRIP | HNSC | chr6 | 86328627 | 86328627 | C | T | Missense_Mutation | p.E397K | 2 |
SYNCRIP | UCEC | chr6 | 86350232 | 86350232 | C | A | Nonsense_Mutation | p.E67* | 2 |
SYNCRIP | LIHC | chr6 | 86350237 | 86350237 | A | - | Frame_Shift_Del | p.L65fs | 2 |
SYNCRIP | LUAD | chr6 | 86329003 | 86329003 | G | C | Missense_Mutation | p.R381G | 2 |
SYNCRIP | STAD | chr6 | 86324613 | 86324613 | C | T | Missense_Mutation | p.R578H | 2 |
SYNCRIP | CESC | chr6 | 86349998 | 86349998 | C | T | Missense_Mutation | 2 | |
SYNCRIP | LIHC | chr6 | 86332354 | 86332354 | T | - | Frame_Shift_Del | p.N285fs | 2 |
SYNCRIP | LUAD | chr6 | 86351130 | 86351130 | C | T | Missense_Mutation | p.G10S | 2 |
SYNCRIP | HNSC | chr6 | 86324547 | 86324547 | T | A | Missense_Mutation | p.H600L | 2 |
SYNCRIP | STAD | chr6 | 86324688 | 86324688 | G | A | Missense_Mutation | p.A553V | 2 |
SYNCRIP | SARC | chr6 | 86333723 | 86333723 | C | G | Missense_Mutation | p.Q258H | 2 |
SYNCRIP | ESCA | chr6 | 86332363 | 86332363 | T | A | Missense_Mutation | p.K282M | 2 |
SYNCRIP | LIHC | chr6 | 86328542 | 86328542 | T | - | Frame_Shift_Del | p.N425fs | 2 |
SYNCRIP | LUAD | chr6 | 86346828 | 86346828 | C | T | Missense_Mutation | p.E175K | 2 |
SYNCRIP | STAD | chr6 | 86324832 | 86324832 | C | - | Frame_Shift_Del | p.G505fs | 2 |
SYNCRIP | THYM | chr6 | 86324703 | 86324703 | C | A | Missense_Mutation | p.R548L | 1 |
SYNCRIP | CESC | chr6 | 86349998 | 86349998 | C | T | Missense_Mutation | p.E106K | 1 |
SYNCRIP | LGG | chr6 | 86324825 | 86324825 | A | G | Silent | 1 | |
SYNCRIP | LUAD | chr6 | 86350039 | 86350040 | - | TT | Frame_Shift_Ins | p.C92fs | 1 |
SYNCRIP | SKCM | chr6 | 86324551 | 86324553 | CAC | - | In_Frame_Del | p.GD598del | 1 |
SYNCRIP | LIHC | chr6 | 86333780 | 86333780 | T | C | Silent | 1 | |
SYNCRIP | BLCA | chr6 | 86349960 | 86349963 | TCCT | - | Frame_Shift_Del | p.K117fs | 1 |
SYNCRIP | PAAD | chr6 | 86324728 | 86324728 | C | A | Missense_Mutation | 1 | |
SYNCRIP | LIHC | chr6 | 86332346 | 86332346 | A | G | Missense_Mutation | 1 | |
SYNCRIP | SKCM | chr6 | 86324884 | 86324884 | A | - | Frame_Shift_Del | p.Y453fs | 1 |
SYNCRIP | SKCM | chr6 | 86324884 | 86324884 | A | - | Frame_Shift_Del | p.Y488fs | 1 |
SYNCRIP | ESCA | chr6 | 86324911 | 86324911 | C | A | Missense_Mutation | p.G479C | 1 |
SYNCRIP | LUAD | chr6 | 86324916 | 86324916 | T | A | Missense_Mutation | p.Y477F | 1 |
SYNCRIP | HNSC | chr6 | 86324795 | 86324795 | G | A | Silent | p.P517P | 1 |
SYNCRIP | STAD | chr6 | 86332349 | 86332350 | CT | - | Frame_Shift_Del | p.287_287del | 1 |
SYNCRIP | LIHC | chr6 | 86351138 | 86351138 | T | C | Missense_Mutation | 1 | |
SYNCRIP | SKCM | chr6 | 86324599 | 86324599 | G | A | Nonsense_Mutation | p.Q583X | 1 |
SYNCRIP | THCA | chr6 | 86324584 | 86324584 | G | T | Missense_Mutation | 1 | |
SYNCRIP | LUSC | chr6 | 86332363 | 86332363 | T | G | Missense_Mutation | p.K282T | 1 |
SYNCRIP | LUAD | chr6 | 86350282 | 86350282 | C | A | Splice_Site | p.G50_splice | 1 |
SYNCRIP | KIRC | chr6 | 86324828 | 86324828 | A | G | Silent | p.A506A | 1 |
SYNCRIP | PRAD | chr6 | 86324853 | 86324853 | C | A | Missense_Mutation | p.R498M | 1 |
SYNCRIP | COAD | chr6 | 86324792 | 86324792 | G | A | Silent | p.R420R | 1 |
SYNCRIP | LIHC | chr6 | 86324522 | 86324522 | A | G | Silent | 1 | |
SYNCRIP | SKCM | chr6 | 86333812 | 86333812 | G | A | Missense_Mutation | p.R131C | 1 |
SYNCRIP | THCA | chr6 | 86324743 | 86324743 | C | T | Missense_Mutation | 1 | |
SYNCRIP | LUSC | chr6 | 86324793 | 86324793 | C | A | Missense_Mutation | p.R518L | 1 |
SYNCRIP | HNSC | chr6 | 86324547 | 86324547 | T | A | Missense_Mutation | 1 | |
SYNCRIP | LUAD | chr6 | 86349987 | 86349987 | C | G | Silent | p.G109G | 1 |
SYNCRIP | KIRC | chr6 | 86324775 | 86324775 | G | C | Nonsense_Mutation | p.S524X | 1 |
SYNCRIP | PRAD | chr6 | 86329033 | 86329033 | T | A | Nonsense_Mutation | p.K371* | 1 |
SYNCRIP | COAD | chr6 | 86329126 | 86329126 | G | A | Silent | p.L242L | 1 |
SYNCRIP | LIHC | chr6 | 86350209 | 86350209 | C | A | Missense_Mutation | 1 | |
SYNCRIP | SKCM | chr6 | 86324800 | 86324800 | G | A | Missense_Mutation | p.P418S | 1 |
SYNCRIP | LUSC | chr6 | 86329009 | 86329009 | C | G | Missense_Mutation | p.D379H | 1 |
SYNCRIP | STAD | chr6 | 86329066 | 86329066 | G | A | Nonsense_Mutation | p.Q360X | 1 |
SYNCRIP | HNSC | chr6 | 86346765 | 86346765 | C | G | Missense_Mutation | 1 | |
SYNCRIP | KIRP | chr6 | 86324737 | 86324740 | CTCG | - | Frame_Shift_Del | p.536_537del | 1 |
SYNCRIP | PRAD | chr6 | 86324701 | 86324701 | C | A | Missense_Mutation | p.G549W | 1 |
SYNCRIP | STAD | chr6 | 86328633 | 86328634 | - | T | Frame_Shift_Ins | p.D395fs | 1 |
SYNCRIP | THCA | chr6 | 86324743 | 86324743 | C | T | Missense_Mutation | p.V437I | 1 |
SYNCRIP | COAD | chr6 | 86333816 | 86333816 | T | G | Missense_Mutation | p.E129D | 1 |
SYNCRIP | LIHC | chr6 | 86333797 | 86333797 | T | C | Missense_Mutation | p.I234V | 1 |
SYNCRIP | SKCM | chr6 | 86324551 | 86324553 | CAC | - | In_Frame_Del | p.563_564del | 1 |
SYNCRIP | HNSC | chr6 | 86324795 | 86324795 | G | A | Silent | 1 | |
SYNCRIP | LUSC | chr6 | 86324670 | 86324670 | C | T | Missense_Mutation | p.G559E | 1 |
SYNCRIP | READ | chr6 | 86333742 | 86333742 | T | G | Missense_Mutation | p.K154T | 1 |
SYNCRIP | STAD | chr6 | 86329066 | 86329066 | G | A | Nonsense_Mutation | p.Q360* | 1 |
SYNCRIP | THCA | chr6 | 86324743 | 86324743 | C | T | Missense_Mutation | p.V535I | 1 |
SYNCRIP | COAD | chr6 | 86350030 | 86350030 | A | - | Frame_Shift_Del | p.L95fs | 1 |
SYNCRIP | LIHC | chr6 | 86350164 | 86350164 | C | T | Silent | p.Q89Q | 1 |
SYNCRIP | LUAD | chr6 | 86324692 | 86324692 | C | T | Missense_Mutation | p.G552S | 1 |
SYNCRIP | SKCM | chr6 | 86324704 | 86324704 | G | A | Missense_Mutation | p.R548C | 1 |
SYNCRIP | HNSC | chr6 | 86333818 | 86333818 | C | T | Missense_Mutation | 1 | |
SYNCRIP | OV | chr6 | 86324940 | 86324940 | T | C | Missense_Mutation | p.Y469C | 1 |
SYNCRIP | STAD | chr6 | 86350006 | 86350007 | - | TGT | In_Frame_Ins | p.R103delinsNR | 1 |
SYNCRIP | LGG | chr6 | 86324886 | 86324886 | C | G | Missense_Mutation | p.G487A | 1 |
SYNCRIP | STAD | chr6 | 86329093 | 86329093 | C | A | Nonsense_Mutation | p.E351* | 1 |
SYNCRIP | THYM | chr6 | 86346757 | 86346757 | G | T | Silent | 1 | |
SYNCRIP | COAD | chr6 | 86350180 | 86350180 | T | C | Missense_Mutation | p.D84G | 1 |
SYNCRIP | LUAD | chr6 | 86346742 | 86346742 | T | G | Missense_Mutation | p.R203S | 1 |
SYNCRIP | SKCM | chr6 | 86324599 | 86324599 | G | A | Nonsense_Mutation | p.Q583* | 1 |
SYNCRIP | ACC | chr6 | 86324650 | 86324650 | T | C | Missense_Mutation | p.K566E | 1 |
SYNCRIP | OV | chr6 | 86381336 | 86381336 | G | A | Missense_Mutation | p.R577W | 1 |
SYNCRIP | STAD | chr6 | 86329093 | 86329093 | C | A | Nonsense_Mutation | p.E351X | 1 |
SYNCRIP | CESC | chr6 | 86332240 | 86332240 | G | T | Missense_Mutation | 1 | |
SYNCRIP | LGG | chr6 | 86332297 | 86332297 | C | T | Missense_Mutation | p.R304H | 1 |
SYNCRIP | SARC | chr6 | 86350240 | 86350240 | G | T | Missense_Mutation | 1 | |
SYNCRIP | STAD | chr6 | 86328634 | 86328635 | - | T | Frame_Shift_Ins | p.K394fs | 1 |
SYNCRIP | THYM | chr6 | 86324703 | 86324703 | C | A | Missense_Mutation | 1 | |
SYNCRIP | DLBC | chr6 | 86332210 | 86332210 | A | C | Missense_Mutation | p.V333G | 1 |
SYNCRIP | SKCM | chr6 | 86332226 | 86332226 | C | G | Missense_Mutation | p.D328H | 1 |
SYNCRIP | BLCA | chr6 | 86349960 | 86349963 | TCCT | - | Frame_Shift_Del | 1 | |
SYNCRIP | OV | chr6 | 86324762 | 86324762 | A | C | Silent | p.G528 | 1 |
SYNCRIP | LGG | chr6 | 86332297 | 86332297 | C | T | Missense_Mutation | 1 | |
SYNCRIP | STAD | chr6 | 86350007 | 86350008 | - | TGT | In_Frame_Ins | p.R103T | 1 |
SYNCRIP | THYM | chr6 | 86346757 | 86346757 | G | T | Silent | p.L198L | 1 |
SYNCRIP | SKCM | chr6 | 86324800 | 86324800 | G | A | Missense_Mutation | p.P516S | 1 |
SYNCRIP | BLCA | chr6 | 86325058 | 86325058 | C | T | Missense_Mutation | p.D430N | 1 |
SYNCRIP | CESC | chr6 | 86324748 | 86324748 | C | G | Missense_Mutation | p.R533T | 1 |
SYNCRIP | LGG | chr6 | 86324886 | 86324886 | C | G | Missense_Mutation | 1 | |
SYNCRIP | STAD | chr6 | 86329066 | 86329066 | G | A | Nonsense_Mutation | 1 | |
SYNCRIP | THYM | chr6 | 86332212 | 86332212 | C | T | Silent | p.E332E | 1 |
SYNCRIP | BLCA | chr6 | 86349960 | 86349963 | TCCT | - | Frame_Shift_Del | p.KG117fs | 1 |
SYNCRIP | HNSC | chr6 | 86333818 | 86333818 | C | T | Missense_Mutation | p.E227K | 1 |
SYNCRIP | PAAD | chr6 | 86324728 | 86324728 | C | A | Nonsense_Mutation | p.G540* | 1 |
![]() * Click on the image to open the original image in a new window. |
![]() |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
![]() |
![]() |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
101351 | N/A | AW274852 | ATP13A1 | chr19 | 19756133 | + | SYNCRIP | chr6 | 86352841 | + |
101351 | GBM | TCGA-4W-AA9T-01A | DAAM1 | chr14 | 59758024 | + | SYNCRIP | chr6 | 86329135 | - |
101351 | N/A | BC019360 | EIF3M | chr11 | 32605399 | - | SYNCRIP | chr6 | 86352608 | - |
101351 | Non-Cancer | TCGA-CG-5721-11A | FUCA2 | chr6 | 143818525 | - | SYNCRIP | chr6 | 86333830 | - |
101351 | N/A | AI557045 | KLHL4 | chrX | 86827819 | - | SYNCRIP | chr6 | 86326953 | - |
101351 | N/A | CF134851 | MAP4K5 | chr14 | 50938878 | - | SYNCRIP | chr6 | 86323920 | + |
101351 | N/A | BU151397 | RAVER1 | chr19 | 10433837 | - | SYNCRIP | chr6 | 86328614 | - |
101351 | HNSC | TCGA-CV-6962 | SNX14 | chr6 | 86298581 | - | SYNCRIP | chr6 | 86325065 | - |
101351 | HNSC | TCGA-CV-6962 | SNX14 | chr6 | 86303297 | - | SYNCRIP | chr6 | 86325065 | - |
97964 | BRCA | TCGA-E2-A14V | SYNCRIP | chr6 | 86352514 | - | CDK19 | chr6 | 111067404 | - |
97964 | BRCA | TCGA-E2-A14V-01A | SYNCRIP | chr6 | 86352514 | - | CDK19 | chr6 | 111067403 | - |
97964 | BRCA | TCGA-E2-A14V-01A | SYNCRIP | chr6 | 86352515 | - | CDK19 | chr6 | 111067404 | - |
97964 | BRCA | TCGA-E2-A14V-01A | SYNCRIP | chr6 | 86352515 | - | CDK19 | chr6 | 111095140 | - |
103262 | Non-Cancer | ERR315404 | SYNCRIP | chr6 | 86352515 | - | EEF1A1 | chr6 | 74229779 | - |
88398 | PRAD | TCGA-VN-A88Q | SYNCRIP | chr6 | 86333694 | - | EPB41L2 | chr6 | 131161738 | - |
88398 | N/A | BI495805 | SYNCRIP | chr6 | 86336985 | - | KIF3B | chr20 | 30922814 | - |
100295 | N/A | BD310766 | SYNCRIP | chr6 | 86346797 | - | LPP | chr3 | 187893846 | + |
96066 | OV | TCGA-13-1497-01A | SYNCRIP | chr6 | 86346685 | - | SEMA3A | chr7 | 83739905 | - |
101351 | N/A | AA846916 | SYNCRIP | chr6 | 86322014 | + | SYNCRIP | chr6 | 86322014 | - |
101353 | N/A | AW022188 | ZMYM2 | chr13 | 20663255 | + | SYNCRIP | chr6 | 86336986 | + |
Top |
|
![]() |
![]() |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
Top |
|
![]() |
![]() |
Cancer type | Translation factor | pval | adj.p |
HNSC | SYNCRIP | 0.0075701167117917 | 0.21 |
UVM | SYNCRIP | 0.0244865197498692 | 0.66 |
PAAD | SYNCRIP | 0.0392904067701055 | 1 |
Top |
|
![]() |
![]() |
Cancer type | Translation factor | pval | adj.p |
LIHC | SYNCRIP | 0.00123333195849154 | 0.039 |
LUSC | SYNCRIP | 0.0355592350127101 | 1 |
THCA | SYNCRIP | 0.00040758448727485 | 0.013 |
BRCA | SYNCRIP | 0.00793029393352127 | 0.25 |
PCPG | SYNCRIP | 0.0335902420492316 | 1 |
Top |
|
![]() (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
|
![]() (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C0023418 | leukemia | 1 | CTD_human |