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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: MRPL55 (NCBI Gene ID:128308)


Gene Summary

check button Gene Summary
Gene InformationGene Name: MRPL55
Gene ID: 128308
Gene Symbol

MRPL55

Gene ID

128308

Gene Namemitochondrial ribosomal protein L55
SynonymsAAVG5835|L55nt|MRP-L55|PRO19675
Cytomap

1q42.13

Type of Geneprotein-coding
Description39S ribosomal protein L55, mitochondrialL55mtmitochondrial large ribosomal subunit protein bL31mmitochondrial large ribosomal subunit protein mL55
Modification date20200313
UniProtAcc

Q7Z7F7


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0005840Ribosome
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID


check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'MRPL55[title] AND translation [title] AND human.'
GeneTitlePMID
MRPL55..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST00000295008228295368228295570Frame-shift
ENST00000336300228295368228295570Frame-shift
ENST00000336520228295368228295570Frame-shift
ENST00000348259228295368228295570Frame-shift
ENST00000366733228295368228295570Frame-shift
ENST00000366734228295368228295570Frame-shift
ENST00000366735228295368228295570Frame-shift
ENST00000366736228295368228295570Frame-shift
ENST00000366739228295368228295570Frame-shift
ENST00000366740228295368228295570Frame-shift
ENST00000366741228295368228295570Frame-shift
ENST00000366742228295368228295570Frame-shift
ENST00000366744228295368228295570Frame-shift
ENST00000366746228295368228295570Frame-shift
ENST00000366747228295368228295570Frame-shift
ENST00000391867228295368228295570Frame-shift
ENST000002950082282959352282960193UTR-3CDS
ENST000003365202282959352282960193UTR-3CDS
ENST000003482592282959352282960193UTR-3CDS
ENST000003667412282959352282960193UTR-3CDS
ENST000003667422282959352282960223UTR-3CDS
ENST000003667462282959352282960193UTR-3CDS
ENST000003363002282961372282961753UTR-3UTR
ENST000003667362282961372282962093UTR-3UTR
ENST000003667392282961372282961753UTR-3UTR
ENST000003667402282961372282961753UTR-3UTR
ENST000003667472282961372282961753UTR-3UTR
ENST000003918672282961372282961753UTR-3UTR
ENST000003667442282961412282962093UTR-3UTR
ENST000002950082282966552282967223UTR-3UTR
ENST000003365202282966552282967223UTR-3UTR
ENST000003918672282966552282967223UTR-3UTR

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
KIRCMRPL55-1.021634418322580.000291940846845375
BRCAMRPL55-1.640929106039246.01408870059924e-14
LUSCMRPL55-1.426655298368467.19742900589893e-05
LUADMRPL55-2.504068296944597.3663238952828e-06


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
LAMLMRPL55230.02885389177117870.4983393296089390.619717333333333-0.290377720329571-0.578892506177093
LGGMRPL55230.04104395664084530.5232535798816570.612235454545455-0.738718068306107-0.981798263750945
SARCMRPL55210.03374461741169970.3075006782945740.1730482954545450.08048718374583410.602742645338509

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
CESCMRPL55320.009677513886454590.610282758620690.531022311963655-0.1382311913569180.173982967288136
HNSCMRPL55320.04455115736638470.6069504201680670.5365412585638160.4655199242617650.26094541794056

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
SARCMRPL550.1094645370.025726238
BLCAMRPL550.0522199240.040301282

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with MRPL55 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
BRCACell metabolism geneMRPL55MTX10.8012808811.51E-273
BRCACell metabolism geneMRPL55GUK10.8531935510
CESCCell metabolism geneMRPL55MTX10.8220484588.04E-77
DLBCCell metabolism geneMRPL55PTDSS20.8000519678.97E-12
DLBCCell metabolism geneMRPL55PIGQ0.800432728.62E-12
DLBCCell metabolism geneMRPL55POLR2J0.8005668898.50E-12
DLBCCell metabolism geneMRPL55TIMM8B0.8034055486.32E-12
DLBCCell metabolism geneMRPL55ECHS10.8038248246.05E-12
DLBCCell metabolism geneMRPL55SNRPD20.8043542545.72E-12
DLBCCell metabolism geneMRPL55PGLS0.8052318755.21E-12
DLBCCell metabolism geneMRPL55LYPLA20.8055109985.06E-12
DLBCCell metabolism geneMRPL55POLR2F0.8055426375.04E-12
DLBCCell metabolism geneMRPL55SAT20.8055917635.01E-12
DLBCCell metabolism geneMRPL55GEMIN70.8067893364.41E-12
DLBCCell metabolism geneMRPL55ITPA0.8076339174.03E-12
DLBCCell metabolism geneMRPL55PSMC10.8076627914.01E-12
DLBCCell metabolism geneMRPL55ACOT80.8096492223.23E-12
DLBCCell metabolism geneMRPL55DPM20.8179864451.27E-12
DLBCCell metabolism geneMRPL55PSMC30.8193650121.08E-12
DLBCCell metabolism geneMRPL55TOMM220.8195104881.07E-12
DLBCCell metabolism geneMRPL55PSMC50.8201319649.92E-13
DLBCCell metabolism geneMRPL55TIMM90.821555628.40E-13
DLBCCell metabolism geneMRPL55LSM40.8221876557.79E-13
DLBCCell metabolism geneMRPL55DPM30.8223442947.65E-13
DLBCCell metabolism geneMRPL55PSMD40.8274309784.16E-13
DLBCCell metabolism geneMRPL55PHKG20.8282188213.78E-13
DLBCCell metabolism geneMRPL55MIF0.8335136291.95E-13
DLBCCell metabolism geneMRPL55PSMD130.8337875291.89E-13
DLBCCell metabolism geneMRPL55MTX10.8347759621.66E-13
DLBCCell metabolism geneMRPL55FAU0.8353318371.55E-13
DLBCCell metabolism geneMRPL55POLE40.8357493141.47E-13
DLBCCell metabolism geneMRPL55NME20.8361044021.40E-13
DLBCCell metabolism geneMRPL55TSTA30.8369425431.26E-13
DLBCCell metabolism geneMRPL55PFDN50.8398315638.62E-14
DLBCCell metabolism geneMRPL55POLR2L0.8409562687.42E-14
DLBCCell metabolism geneMRPL55UROD0.8416886846.73E-14
DLBCCell metabolism geneMRPL55TIMM130.8440783644.88E-14
DLBCCell metabolism geneMRPL55POLR2I0.8441165384.85E-14
DLBCCell metabolism geneMRPL55EXOSC40.8636571952.78E-15
DLBCCell metabolism geneMRPL55PSMB60.8725373776.52E-16
DLBCCell metabolism geneMRPL55PSMB30.8782840912.41E-16
DLBCCell metabolism geneMRPL55GUK10.8902803272.53E-17
DLBCCell metabolism geneMRPL55GFER0.8954239458.87E-18
DLBCCGCMRPL55TFPT0.8075303114.07E-12
DLBCCGCMRPL55HRAS0.8371119191.23E-13
DLBCCGCMRPL55NTHL10.8426479975.92E-14
DLBCEpifactorMRPL55PPP4C0.8015827867.65E-12
DLBCEpifactorMRPL55TFPT0.8075303114.07E-12
DLBCEpifactorMRPL55INO80E0.8208893089.08E-13
DLBCEpifactorMRPL55SIRT60.8214719588.48E-13
DLBCEpifactorMRPL55BRMS10.824222716.12E-13
DLBCEpifactorMRPL55DMAP10.831602852.48E-13
DLBCEpifactorMRPL55MBD30.8336201521.93E-13
DLBCEpifactorMRPL55RBX10.8563204898.54E-15
DLBCEpifactorMRPL55ZNHIT10.8567607918.00E-15
DLBCEpifactorMRPL55EXOSC40.8636571952.78E-15
DLBCIUPHARMRPL55ATG4B0.8157313091.64E-12
DLBCIUPHARMRPL55MPDU10.8183318461.22E-12
DLBCIUPHARMRPL55SIRT60.8214719588.48E-13
DLBCIUPHARMRPL55PHKG20.8282188213.78E-13
DLBCIUPHARMRPL55HRAS0.8371119191.23E-13
DLBCIUPHARMRPL55PSMB60.8725373776.52E-16
DLBCKinaseMRPL55PHKG20.8282188213.78E-13
DLBCTFMRPL55ZNF4440.8106397322.90E-12
DLBCTFMRPL55MBD30.8336201521.93E-13
DLBCTFMRPL55THAP30.8359450671.43E-13
DLBCTFMRPL55NME20.8361044021.40E-13
DLBCTFMRPL55THAP40.8656891462.01E-15
DLBCTFMRPL55THAP70.8829857341.02E-16
DLBCTSGMRPL55PARK70.8099502823.13E-12
DLBCTSGMRPL55SIRT60.8214719588.48E-13
DLBCTSGMRPL55BRMS10.824222716.12E-13
DLBCTSGMRPL55STUB10.8321091482.33E-13
DLBCTSGMRPL55TSSC40.8924073951.65E-17
DLBCTSGMRPL55GADD45GIP10.9096030963.64E-19
HNSCCell metabolism geneMRPL55PSMB40.8139061554.06E-135
HNSCCell metabolism geneMRPL55MTX10.8239274153.16E-141
HNSCCell metabolism geneMRPL55PSMD40.8556705511.77E-163
KICHCell metabolism geneMRPL55PFDN20.806995234.56E-22
KICHCell metabolism geneMRPL55PSMB40.818336934.01E-23
KICHCell metabolism geneMRPL55PSMB30.8189363583.51E-23
KICHCell metabolism geneMRPL55MTX10.8251612428.56E-24
KICHCGCMRPL55ASPSCR10.8415965451.55E-25
KICHEpifactorMRPL55DMAP10.8116081811.73E-22
KIRPCell metabolism geneMRPL55POLR2I0.8144808946.97E-78
KIRPCell metabolism geneMRPL55MTX10.8219814151.78E-80
KIRPCell metabolism geneMRPL55PSMD40.8244542062.33E-81
KIRPCell metabolism geneMRPL55PSMB40.8414585318.02E-88
KIRPCGCMRPL55ASPSCR10.806184893.78E-75
KIRPTSGMRPL55GADD45GIP10.8290905184.75E-83
LAMLCell metabolism geneMRPL55IDH3B0.8197524563.00E-43
LAMLCell metabolism geneMRPL55GUK10.8365867341.48E-46
LAMLEpifactorMRPL55MCRS10.8116001169.08E-42
LAMLEpifactorMRPL55PRPF310.8179878796.37E-43
LAMLTSGMRPL55STUB10.8154075251.89E-42
MESOCell metabolism geneMRPL55GUK10.8288528673.77E-23
PAADEpifactorMRPL55ZNHIT10.8275122843.01E-47
PAADTSGMRPL55TSSC40.8030758971.48E-42
PCPGCell metabolism geneMRPL55DPM30.8123954273.31E-45
PCPGTSGMRPL55GADD45GIP10.8048995468.54E-44
PRADCell metabolism geneMRPL55MTX10.8002120928.78E-124
PRADCell metabolism geneMRPL55PSMC50.8002601168.28E-124
PRADCell metabolism geneMRPL55DPM20.8015116971.79E-124
PRADCell metabolism geneMRPL55PSMC30.8044227544.83E-126
PRADCell metabolism geneMRPL55LSM40.8086655432.25E-128
PRADCell metabolism geneMRPL55IDH3G0.8096098246.68E-129
PRADCell metabolism geneMRPL55PSMB40.8114503836.15E-130
PRADCell metabolism geneMRPL55PGLS0.8115855455.15E-130
PRADCell metabolism geneMRPL55HSD17B100.8117089314.39E-130
PRADCell metabolism geneMRPL55TIMM500.8120429782.84E-130
PRADCell metabolism geneMRPL55FAU0.8123781731.83E-130
PRADCell metabolism geneMRPL55PHPT10.8155143412.89E-132
PRADCell metabolism geneMRPL55OAZ10.8169342034.30E-133
PRADCell metabolism geneMRPL55GPX10.8176162621.71E-133
PRADCell metabolism geneMRPL55GFER0.8196051391.14E-134
PRADCell metabolism geneMRPL55NME30.8196131691.13E-134
PRADCell metabolism geneMRPL55POLR2F0.8201476345.42E-135
PRADCell metabolism geneMRPL55GPX40.8267321885.28E-139
PRADCell metabolism geneMRPL55B4GALT70.8283035365.49E-140
PRADCell metabolism geneMRPL55TIMM17B0.8316311294.22E-142
PRADCell metabolism geneMRPL55POLR2L0.8325461661.09E-142
PRADCell metabolism geneMRPL55PSMD40.8329164026.26E-143
PRADCell metabolism geneMRPL55PSMB30.8572181824.44E-160
PRADCell metabolism geneMRPL55POLR2I0.8716796887.18E-172
PRADCell metabolism geneMRPL55DPM30.8844673461.47E-183
PRADCell metabolism geneMRPL55GUK10.8984285495.18E-198
PRADCGCMRPL55MAP2K20.8146290549.38E-132
PRADCGCMRPL55ASPSCR10.8396816452.05E-147
PRADCGCMRPL55HRAS0.8434049515.69E-150
PRADEpifactorMRPL55INO80E0.8013154482.27E-124
PRADEpifactorMRPL55DMAP10.803473781.58E-125
PRADEpifactorMRPL55PRPF310.8157330322.15E-132
PRADEpifactorMRPL55TAF100.823735133.71E-137
PRADEpifactorMRPL55SIRT60.8385216481.25E-146
PRADEpifactorMRPL55BRMS10.840155399.80E-148
PRADEpifactorMRPL55ZNHIT10.8842433942.42E-183
PRADIUPHARMRPL55CSNK2B0.8035198061.49E-125
PRADIUPHARMRPL55MAP2K20.8146290549.38E-132
PRADIUPHARMRPL55SIRT60.8385216481.25E-146
PRADIUPHARMRPL55HRAS0.8434049515.69E-150
PRADKinaseMRPL55MAP2K20.8146290549.38E-132
PRADKinaseMRPL55FASTK0.8391281644.87E-147
PRADTFMRPL55DRAP10.8061698715.38E-127
PRADTFMRPL55ZNF5240.8062536674.84E-127
PRADTFMRPL55ZNF4440.8119035553.40E-130
PRADTFMRPL55ZNF6880.8261118851.28E-138
PRADTFMRPL55THAP30.8342066989.06E-144
PRADTFMRPL55THAP70.847006981.65E-152
PRADTSGMRPL55STUB10.8297598146.61E-141
PRADTSGMRPL55SIRT60.8385216481.25E-146
PRADTSGMRPL55BRMS10.840155399.80E-148
PRADTSGMRPL55TSSC40.8439284952.46E-150
PRADTSGMRPL55GADD45GIP10.8947629195.07E-194
READCell metabolism geneMRPL55GUK10.801212981.04E-24
READCell metabolism geneMRPL55PSMB40.8037897625.70E-25
READCell metabolism geneMRPL55POLR2I0.8128312826.42E-26
READCell metabolism geneMRPL55MTX10.8401882223.93E-29
READTSGMRPL55GADD45GIP10.8257990282.26E-27
SKCMCell metabolism geneMRPL55GUK10.8012385082.41E-107
TGCTCell metabolism geneMRPL55MTX10.8163976331.49E-38
THCACell metabolism geneMRPL55IDH3G0.8017090621.66E-129
THCACell metabolism geneMRPL55PSMD130.8019990371.15E-129
THCACell metabolism geneMRPL55LSM40.8050249372.29E-131
THCACell metabolism geneMRPL55POLR2H0.8099241453.49E-134
THCACell metabolism geneMRPL55PHKG20.8117774232.85E-135
THCACell metabolism geneMRPL55PFDN50.8130476695.05E-136
THCACell metabolism geneMRPL55POLR2L0.81413161.14E-136
THCACell metabolism geneMRPL55PSMD40.814223881.00E-136
THCACell metabolism geneMRPL55TOMM400.8162723385.86E-138
THCACell metabolism geneMRPL55B4GALT70.8212449385.10E-141
THCACell metabolism geneMRPL55TIMM130.8218035312.28E-141
THCACell metabolism geneMRPL55PSMC30.8229600324.26E-142
THCACell metabolism geneMRPL55APRT0.8244467684.86E-143
THCACell metabolism geneMRPL55SNRPD20.826250463.38E-144
THCACell metabolism geneMRPL55PPCDC0.8263674562.84E-144
THCACell metabolism geneMRPL55ACOT80.8267996761.49E-144
THCACell metabolism geneMRPL55PSMB60.828293531.59E-145
THCACell metabolism geneMRPL55B3GAT30.8305771345.00E-147
THCACell metabolism geneMRPL55ITPA0.8313061061.64E-147
THCACell metabolism geneMRPL55NME30.8341158552.11E-149
THCACell metabolism geneMRPL55PHPT10.8352879543.34E-150
THCACell metabolism geneMRPL55FAU0.8360497861.00E-150
THCACell metabolism geneMRPL55GUK10.8383184162.68E-152
THCACell metabolism geneMRPL55PGLS0.8397297932.74E-153
THCACell metabolism geneMRPL55PSMB40.8415404611.42E-154
THCACell metabolism geneMRPL55GAMT0.8442311771.63E-156
THCACell metabolism geneMRPL55NT5C0.8445033161.03E-156
THCACell metabolism geneMRPL55PSMC50.8447435016.88E-157
THCACell metabolism geneMRPL55POLR2J0.8521606931.87E-162
THCACell metabolism geneMRPL55PSMB30.8643185472.84E-172
THCACell metabolism geneMRPL55MTX10.8795142225.61E-186
THCACell metabolism geneMRPL55POLR2I0.8900704621.22E-196
THCACell metabolism geneMRPL55EXOSC40.8972504341.56E-204
THCACell metabolism geneMRPL55DPM30.9165419164.99E-229
THCACGCMRPL55NTHL10.8132109584.04E-136
THCACGCMRPL55TFPT0.8246005643.87E-143
THCACGCMRPL55HRAS0.8423868323.51E-155
THCACGCMRPL55ASPSCR10.8811058681.61E-187
THCAEpifactorMRPL55TAF100.8034696481.73E-130
THCAEpifactorMRPL55HMG20B0.8133198723.48E-136
THCAEpifactorMRPL55DMAP10.8181999823.91E-139
THCAEpifactorMRPL55TFPT0.8246005643.87E-143
THCAEpifactorMRPL55BRMS10.8396338543.20E-153
THCAEpifactorMRPL55INO80E0.8504933533.54E-161
THCAEpifactorMRPL55PRPF310.852511631.00E-162
THCAEpifactorMRPL55RUVBL20.8892210059.67E-196
THCAEpifactorMRPL55EXOSC40.8972504341.56E-204
THCAEpifactorMRPL55ZNHIT10.9141353821.15E-225
THCAIUPHARMRPL55PHKG20.8117774232.85E-135
THCAIUPHARMRPL55TPRA10.8147941734.57E-137
THCAIUPHARMRPL55PSMB60.828293531.59E-145
THCAIUPHARMRPL55HRAS0.8423868323.51E-155
THCAIUPHARMRPL55NT5C0.8445033161.03E-156
THCAKinaseMRPL55PHKG20.8117774232.85E-135
THCAKinaseMRPL55FASTK0.8442726011.52E-156
THCATFMRPL55ZNF4280.8001151361.27E-128
THCATFMRPL55ZNF7870.8053450481.51E-131
THCATFMRPL55HMG20B0.8133198723.48E-136
THCATFMRPL55ZNF6880.8361001539.26E-151
THCATFMRPL55THAP70.8389977788.96E-153
THCATSGMRPL55AIP0.8177127237.78E-139
THCATSGMRPL55NPRL20.8180705114.70E-139
THCATSGMRPL55TSSC40.8371170011.84E-151
THCATSGMRPL55BRMS10.8396338543.20E-153
THCATSGMRPL55GADD45GIP10.9020581093.74E-210
THYMCell metabolism geneMRPL55PFDN20.8014529141.46E-28
THYMCell metabolism geneMRPL55LCMT10.8018412491.32E-28
THYMCell metabolism geneMRPL55COX170.8023317951.15E-28
THYMCell metabolism geneMRPL55TOMM220.8056672914.62E-29
THYMCell metabolism geneMRPL55DHRS4L20.8068322933.34E-29
THYMCell metabolism geneMRPL55LSM40.8072690772.96E-29
THYMCell metabolism geneMRPL55DGUOK0.8073405942.90E-29
THYMCell metabolism geneMRPL55GSTP10.8074829682.79E-29
THYMCell metabolism geneMRPL55ALG30.809570791.55E-29
THYMCell metabolism geneMRPL55DHRS40.8099627721.39E-29
THYMCell metabolism geneMRPL55SLC27A50.8106347261.14E-29
THYMCell metabolism geneMRPL55DOHH0.811151129.88E-30
THYMCell metabolism geneMRPL55PSMB100.8121892237.34E-30
THYMCell metabolism geneMRPL55PFDN50.8148124263.43E-30
THYMCell metabolism geneMRPL55DGAT10.8183453631.21E-30
THYMCell metabolism geneMRPL55UROS0.8186274951.11E-30
THYMCell metabolism geneMRPL55HMBS0.818748341.07E-30
THYMCell metabolism geneMRPL55IDH3G0.8195868288.33E-31
THYMCell metabolism geneMRPL55PSMB60.8203941466.53E-31
THYMCell metabolism geneMRPL55PGP0.82086345.66E-31
THYMCell metabolism geneMRPL55TSTA30.8227066923.23E-31
THYMCell metabolism geneMRPL55TAZ0.8239836232.18E-31
THYMCell metabolism geneMRPL55CYC10.8257437061.26E-31
THYMCell metabolism geneMRPL55SRM0.8257741181.25E-31
THYMCell metabolism geneMRPL55FAU0.8262520831.08E-31
THYMCell metabolism geneMRPL55PMPCA0.8262797591.07E-31
THYMCell metabolism geneMRPL55GEMIN60.8309721162.39E-32
THYMCell metabolism geneMRPL55SSR40.8316817941.90E-32
THYMCell metabolism geneMRPL55POLE40.8368442683.45E-33
THYMCell metabolism geneMRPL55HMOX20.8377366962.55E-33
THYMCell metabolism geneMRPL55POLR2F0.8424680525.02E-34
THYMCell metabolism geneMRPL55ITPA0.8424847934.99E-34
THYMCell metabolism geneMRPL55EXOSC50.8431167114.00E-34
THYMCell metabolism geneMRPL55PSMB70.8434973073.50E-34
THYMCell metabolism geneMRPL55TBCB0.8438088853.13E-34
THYMCell metabolism geneMRPL55PSMC50.8438242183.12E-34
THYMCell metabolism geneMRPL55PTGES20.8447027582.28E-34
THYMCell metabolism geneMRPL55PPCDC0.8455238891.71E-34
THYMCell metabolism geneMRPL55PMVK0.8489696224.91E-35
THYMCell metabolism geneMRPL55PHKG20.8539412127.69E-36
THYMCell metabolism geneMRPL55PSMC10.8542165976.93E-36
THYMCell metabolism geneMRPL55TIMM8B0.8550683685.01E-36
THYMCell metabolism geneMRPL55MED270.8550990444.95E-36
THYMCell metabolism geneMRPL55GSTZ10.8606151975.72E-37
THYMCell metabolism geneMRPL55GMPPA0.8624158452.77E-37
THYMCell metabolism geneMRPL55NANS0.8628168462.36E-37
THYMCell metabolism geneMRPL55EBP0.8631391392.07E-37
THYMCell metabolism geneMRPL55SNRPD20.8631993352.02E-37
THYMCell metabolism geneMRPL55TIMM100.8646164871.13E-37
THYMCell metabolism geneMRPL55DPM20.8663106235.59E-38
THYMCell metabolism geneMRPL55TIMM130.8673231013.66E-38
THYMCell metabolism geneMRPL55PSME20.869267911.60E-38
THYMCell metabolism geneMRPL55TOMM400.8716562475.70E-39
THYMCell metabolism geneMRPL55GEMIN70.8722265414.44E-39
THYMCell metabolism geneMRPL55TIMM17B0.8751870611.19E-39
THYMCell metabolism geneMRPL55HSD17B100.8795752681.59E-40
THYMCell metabolism geneMRPL55ACOT80.8796249971.56E-40
THYMCell metabolism geneMRPL55MIF0.8804050841.08E-40
THYMCell metabolism geneMRPL55PPOX0.8813160127.02E-41
THYMCell metabolism geneMRPL55POLR2H0.8825117073.97E-41
THYMCell metabolism geneMRPL55PHPT10.88299143.15E-41
THYMCell metabolism geneMRPL55PSMB30.88350652.46E-41
THYMCell metabolism geneMRPL55APRT0.8859366427.47E-42
THYMCell metabolism geneMRPL55ATP5G10.8912314555.07E-43
THYMCell metabolism geneMRPL55EXOSC40.8927952822.23E-43
THYMCell metabolism geneMRPL55PGLS0.892939012.07E-43
THYMCell metabolism geneMRPL55POLR2J0.8983122421.11E-44
THYMCell metabolism geneMRPL55WBSCR220.9012755912.06E-45
THYMCell metabolism geneMRPL55GUK10.9054190891.78E-46
THYMCell metabolism geneMRPL55PSMB40.9068935447.27E-47
THYMCell metabolism geneMRPL55TIMM500.9151185553.63E-49
THYMCell metabolism geneMRPL55PSMD40.9298677136.01E-54
THYMCell metabolism geneMRPL55MTX10.9387512862.32E-57
THYMCell metabolism geneMRPL55DPM30.9461244131.31E-60
THYMCell metabolism geneMRPL55POLR2I0.948556098.85E-62
THYMCGCMRPL55RBM100.8002102832.04E-28
THYMCGCMRPL55SDHAF20.8003523721.97E-28
THYMCGCMRPL55MGMT0.809747281.47E-29
THYMCGCMRPL55TFPT0.8233818532.62E-31
THYMCGCMRPL55COX6C0.8716789635.65E-39
THYMEpifactorMRPL55FBL0.8036995347.94E-29
THYMEpifactorMRPL55C17orf490.8112440449.62E-30
THYMEpifactorMRPL55TFPT0.8233818532.62E-31
THYMEpifactorMRPL55CCDC1010.8251514821.52E-31
THYMEpifactorMRPL55PAF10.8278464746.50E-32
THYMEpifactorMRPL55ZGPAT0.8296522043.66E-32
THYMEpifactorMRPL55EXOSC50.8431167114.00E-34
THYMEpifactorMRPL55LAS1L0.8450739812.00E-34
THYMEpifactorMRPL55INO80E0.8524324811.36E-35
THYMEpifactorMRPL55CDK50.8617506943.63E-37
THYMEpifactorMRPL55TAF100.8702376621.06E-38
THYMEpifactorMRPL55BRMS10.8773841674.40E-40
THYMEpifactorMRPL55SIRT60.8795477221.62E-40
THYMEpifactorMRPL55PRPF310.8881168182.51E-42
THYMEpifactorMRPL55EXOSC40.8927952822.23E-43
THYMEpifactorMRPL55ZNHIT10.9180983234.65E-50
THYMIUPHARMRPL55FKBP1A0.805183555.28E-29
THYMIUPHARMRPL55SLC27A50.8106347261.14E-29
THYMIUPHARMRPL55DGAT10.8183453631.21E-30
THYMIUPHARMRPL55PSMB60.8203941466.53E-31
THYMIUPHARMRPL55SLC39A30.8209238755.56E-31
THYMIUPHARMRPL55SIRT30.8232248392.75E-31
THYMIUPHARMRPL55ADCK50.8358347534.84E-33
THYMIUPHARMRPL55HMOX20.8377366962.55E-33
THYMIUPHARMRPL55ATP6V0B0.8434087263.61E-34
THYMIUPHARMRPL55PTGES20.8447027582.28E-34
THYMIUPHARMRPL55PMVK0.8489696224.91E-35
THYMIUPHARMRPL55PHKG20.8539412127.69E-36
THYMIUPHARMRPL55ABCB80.85476865.61E-36
THYMIUPHARMRPL55CDK50.8617506943.63E-37
THYMIUPHARMRPL55SIRT60.8795477221.62E-40
THYMKinaseMRPL55ADCK50.8358347534.84E-33
THYMKinaseMRPL55PHKG20.8539412127.69E-36
THYMKinaseMRPL55CDK50.8617506943.63E-37
THYMKinaseMRPL55FASTK0.9076892214.45E-47
THYMTFMRPL55THAP80.8079479492.45E-29
THYMTFMRPL55ZNF6920.8091098041.76E-29
THYMTFMRPL55IRF30.811791728.22E-30
THYMTFMRPL55ZNF320.813622134.85E-30
THYMTFMRPL55ZGPAT0.8296522043.66E-32
THYMTFMRPL55DRAP10.8374384292.82E-33
THYMTFMRPL55ZNF5810.8435967713.38E-34
THYMTFMRPL55USF10.8558950073.64E-36
THYMTFMRPL55ZNF5240.8602298856.67E-37
THYMTFMRPL55THAP70.8622408492.98E-37
THYMTFMRPL55ZNF6880.8733891342.66E-39
THYMTFMRPL55ZNF7870.8795386691.62E-40
THYMTFMRPL55GLI40.8891469971.49E-42
THYMTSGMRPL55PARK70.8024207211.12E-28
THYMTSGMRPL55GSTP10.8074829682.79E-29
THYMTSGMRPL55IRF30.811791728.22E-30
THYMTSGMRPL55SIRT30.8232248392.75E-31
THYMTSGMRPL55TSSC40.8433065853.74E-34
THYMTSGMRPL55ST200.8451953441.92E-34
THYMTSGMRPL55NPRL20.8519916831.60E-35
THYMTSGMRPL55GABARAP0.8609844474.94E-37
THYMTSGMRPL55STUB10.8712868176.70E-39
THYMTSGMRPL55BRMS10.8773841674.40E-40
THYMTSGMRPL55SIRT60.8795477221.62E-40
THYMTSGMRPL55GADD45GIP10.9205247168.24E-51
UCECCell metabolism geneMRPL55DPM30.8017491472.30E-46
UCECCell metabolism geneMRPL55MTX10.8268194631.27E-51
UCECCell metabolism geneMRPL55GUK10.8394585141.32E-54
UCECEpifactorMRPL55ZNHIT10.8255574372.44E-51
UCECKinaseMRPL55FASTK0.8061349523.14E-47
UCSCell metabolism geneMRPL55PFDN20.8014529141.46E-28
UCSCell metabolism geneMRPL55LCMT10.8018412491.32E-28
UCSCell metabolism geneMRPL55COX170.8023317951.15E-28
UCSCell metabolism geneMRPL55TOMM220.8056672914.62E-29
UCSCell metabolism geneMRPL55DHRS4L20.8068322933.34E-29
UCSCell metabolism geneMRPL55LSM40.8072690772.96E-29
UCSCell metabolism geneMRPL55DGUOK0.8073405942.90E-29
UCSCell metabolism geneMRPL55GSTP10.8074829682.79E-29
UCSCell metabolism geneMRPL55ALG30.809570791.55E-29
UCSCell metabolism geneMRPL55DHRS40.8099627721.39E-29
UCSCell metabolism geneMRPL55SLC27A50.8106347261.14E-29
UCSCell metabolism geneMRPL55DOHH0.811151129.88E-30
UCSCell metabolism geneMRPL55PSMB100.8121892237.34E-30
UCSCell metabolism geneMRPL55PFDN50.8148124263.43E-30
UCSCell metabolism geneMRPL55DGAT10.8183453631.21E-30
UCSCell metabolism geneMRPL55UROS0.8186274951.11E-30
UCSCell metabolism geneMRPL55HMBS0.818748341.07E-30
UCSCell metabolism geneMRPL55IDH3G0.8195868288.33E-31
UCSCell metabolism geneMRPL55PSMB60.8203941466.53E-31
UCSCell metabolism geneMRPL55PGP0.82086345.66E-31
UCSCell metabolism geneMRPL55TSTA30.8227066923.23E-31
UCSCell metabolism geneMRPL55TAZ0.8239836232.18E-31
UCSCell metabolism geneMRPL55CYC10.8257437061.26E-31
UCSCell metabolism geneMRPL55SRM0.8257741181.25E-31
UCSCell metabolism geneMRPL55FAU0.8262520831.08E-31
UCSCell metabolism geneMRPL55PMPCA0.8262797591.07E-31
UCSCell metabolism geneMRPL55GEMIN60.8309721162.39E-32
UCSCell metabolism geneMRPL55SSR40.8316817941.90E-32
UCSCell metabolism geneMRPL55POLE40.8368442683.45E-33
UCSCell metabolism geneMRPL55HMOX20.8377366962.55E-33
UCSCell metabolism geneMRPL55POLR2F0.8424680525.02E-34
UCSCell metabolism geneMRPL55ITPA0.8424847934.99E-34
UCSCell metabolism geneMRPL55EXOSC50.8431167114.00E-34
UCSCell metabolism geneMRPL55PSMB70.8434973073.50E-34
UCSCell metabolism geneMRPL55TBCB0.8438088853.13E-34
UCSCell metabolism geneMRPL55PSMC50.8438242183.12E-34
UCSCell metabolism geneMRPL55PTGES20.8447027582.28E-34
UCSCell metabolism geneMRPL55PPCDC0.8455238891.71E-34
UCSCell metabolism geneMRPL55PMVK0.8489696224.91E-35
UCSCell metabolism geneMRPL55PHKG20.8539412127.69E-36
UCSCell metabolism geneMRPL55PSMC10.8542165976.93E-36
UCSCell metabolism geneMRPL55TIMM8B0.8550683685.01E-36
UCSCell metabolism geneMRPL55MED270.8550990444.95E-36
UCSCell metabolism geneMRPL55GSTZ10.8606151975.72E-37
UCSCell metabolism geneMRPL55GMPPA0.8624158452.77E-37
UCSCell metabolism geneMRPL55NANS0.8628168462.36E-37
UCSCell metabolism geneMRPL55EBP0.8631391392.07E-37
UCSCell metabolism geneMRPL55SNRPD20.8631993352.02E-37
UCSCell metabolism geneMRPL55TIMM100.8646164871.13E-37
UCSCell metabolism geneMRPL55DPM20.8663106235.59E-38
UCSCell metabolism geneMRPL55TIMM130.8673231013.66E-38
UCSCell metabolism geneMRPL55PSME20.869267911.60E-38
UCSCell metabolism geneMRPL55TOMM400.8716562475.70E-39
UCSCell metabolism geneMRPL55GEMIN70.8722265414.44E-39
UCSCell metabolism geneMRPL55TIMM17B0.8751870611.19E-39
UCSCell metabolism geneMRPL55HSD17B100.8795752681.59E-40
UCSCell metabolism geneMRPL55ACOT80.8796249971.56E-40
UCSCell metabolism geneMRPL55MIF0.8804050841.08E-40
UCSCell metabolism geneMRPL55PPOX0.8813160127.02E-41
UCSCell metabolism geneMRPL55POLR2H0.8825117073.97E-41
UCSCell metabolism geneMRPL55PHPT10.88299143.15E-41
UCSCell metabolism geneMRPL55PSMB30.88350652.46E-41
UCSCell metabolism geneMRPL55APRT0.8859366427.47E-42
UCSCell metabolism geneMRPL55ATP5G10.8912314555.07E-43
UCSCell metabolism geneMRPL55EXOSC40.8927952822.23E-43
UCSCell metabolism geneMRPL55PGLS0.892939012.07E-43
UCSCell metabolism geneMRPL55POLR2J0.8983122421.11E-44
UCSCell metabolism geneMRPL55WBSCR220.9012755912.06E-45
UCSCell metabolism geneMRPL55GUK10.9054190891.78E-46
UCSCell metabolism geneMRPL55PSMB40.9068935447.27E-47
UCSCell metabolism geneMRPL55TIMM500.9151185553.63E-49
UCSCell metabolism geneMRPL55PSMD40.9298677136.01E-54
UCSCell metabolism geneMRPL55MTX10.9387512862.32E-57
UCSCell metabolism geneMRPL55DPM30.9461244131.31E-60
UCSCell metabolism geneMRPL55POLR2I0.948556098.85E-62
UCSCGCMRPL55RBM100.8002102832.04E-28
UCSCGCMRPL55SDHAF20.8003523721.97E-28
UCSCGCMRPL55MGMT0.809747281.47E-29
UCSCGCMRPL55TFPT0.8233818532.62E-31
UCSCGCMRPL55COX6C0.8716789635.65E-39
UCSEpifactorMRPL55FBL0.8036995347.94E-29
UCSEpifactorMRPL55C17orf490.8112440449.62E-30
UCSEpifactorMRPL55TFPT0.8233818532.62E-31
UCSEpifactorMRPL55CCDC1010.8251514821.52E-31
UCSEpifactorMRPL55PAF10.8278464746.50E-32
UCSEpifactorMRPL55ZGPAT0.8296522043.66E-32
UCSEpifactorMRPL55EXOSC50.8431167114.00E-34
UCSEpifactorMRPL55LAS1L0.8450739812.00E-34
UCSEpifactorMRPL55INO80E0.8524324811.36E-35
UCSEpifactorMRPL55CDK50.8617506943.63E-37
UCSEpifactorMRPL55TAF100.8702376621.06E-38
UCSEpifactorMRPL55BRMS10.8773841674.40E-40
UCSEpifactorMRPL55SIRT60.8795477221.62E-40
UCSEpifactorMRPL55PRPF310.8881168182.51E-42
UCSEpifactorMRPL55EXOSC40.8927952822.23E-43
UCSEpifactorMRPL55ZNHIT10.9180983234.65E-50
UCSIUPHARMRPL55FKBP1A0.805183555.28E-29
UCSIUPHARMRPL55SLC27A50.8106347261.14E-29
UCSIUPHARMRPL55DGAT10.8183453631.21E-30
UCSIUPHARMRPL55PSMB60.8203941466.53E-31
UCSIUPHARMRPL55SLC39A30.8209238755.56E-31
UCSIUPHARMRPL55SIRT30.8232248392.75E-31
UCSIUPHARMRPL55ADCK50.8358347534.84E-33
UCSIUPHARMRPL55HMOX20.8377366962.55E-33
UCSIUPHARMRPL55ATP6V0B0.8434087263.61E-34
UCSIUPHARMRPL55PTGES20.8447027582.28E-34
UCSIUPHARMRPL55PMVK0.8489696224.91E-35
UCSIUPHARMRPL55PHKG20.8539412127.69E-36
UCSIUPHARMRPL55ABCB80.85476865.61E-36
UCSIUPHARMRPL55CDK50.8617506943.63E-37
UCSIUPHARMRPL55SIRT60.8795477221.62E-40
UCSKinaseMRPL55ADCK50.8358347534.84E-33
UCSKinaseMRPL55PHKG20.8539412127.69E-36
UCSKinaseMRPL55CDK50.8617506943.63E-37
UCSKinaseMRPL55FASTK0.9076892214.45E-47
UCSTFMRPL55THAP80.8079479492.45E-29
UCSTFMRPL55ZNF6920.8091098041.76E-29
UCSTFMRPL55IRF30.811791728.22E-30
UCSTFMRPL55ZNF320.813622134.85E-30
UCSTFMRPL55ZGPAT0.8296522043.66E-32
UCSTFMRPL55DRAP10.8374384292.82E-33
UCSTFMRPL55ZNF5810.8435967713.38E-34
UCSTFMRPL55USF10.8558950073.64E-36
UCSTFMRPL55ZNF5240.8602298856.67E-37
UCSTFMRPL55THAP70.8622408492.98E-37
UCSTFMRPL55ZNF6880.8733891342.66E-39
UCSTFMRPL55ZNF7870.8795386691.62E-40
UCSTFMRPL55GLI40.8891469971.49E-42
UCSTSGMRPL55PARK70.8024207211.12E-28
UCSTSGMRPL55GSTP10.8074829682.79E-29
UCSTSGMRPL55IRF30.811791728.22E-30
UCSTSGMRPL55SIRT30.8232248392.75E-31
UCSTSGMRPL55TSSC40.8433065853.74E-34
UCSTSGMRPL55ST200.8451953441.92E-34
UCSTSGMRPL55NPRL20.8519916831.60E-35
UCSTSGMRPL55GABARAP0.8609844474.94E-37
UCSTSGMRPL55STUB10.8712868176.70E-39
UCSTSGMRPL55BRMS10.8773841674.40E-40
UCSTSGMRPL55SIRT60.8795477221.62E-40
UCSTSGMRPL55GADD45GIP10.9205247168.24E-51
UVMCell metabolism geneMRPL55ATP5G10.8063348561.80E-19
UVMCell metabolism geneMRPL55POLR2J0.8131666865.10E-20
UVMCell metabolism geneMRPL55MTX10.814755243.77E-20
UVMCell metabolism geneMRPL55POLR2I0.8206648051.20E-20
UVMCell metabolism geneMRPL55DPM30.8480105913.28E-23
UVMCGCMRPL55TFPT0.8171862812.37E-20
UVMEpifactorMRPL55TFPT0.8171862812.37E-20
UVMEpifactorMRPL55ZNHIT10.8323363141.10E-21
UVMTFMRPL55THAP70.8006555274.95E-19
UVMTFMRPL55SLC2A4RG0.8180913351.99E-20
UVMTSGMRPL55GADD45GIP10.8468330624.33E-23


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
LIHCMRPL55MRPL10-3.227036179959310.000209845686767642
KIRPMRPL55MRPL51-1.328406567227610.000213860534131527
LUSCMRPL55MRPL39-3.504117374290040.000985010025625636
KIRCMRPL55MRPL46-7.360814219449090.0011460554764592
KIRPMRPL55MRPL46-7.176716850139060.00123529229313135
COADMRPL55MRPL41-2.995615023823890.00144392251968384
CHOLMRPL55MRPL41-4.963793775422250.00390625
CHOLMRPL55MRPL46-2.737917438173210.00390625
BLCAMRPL55MRPL391.698968519604520.00391769409179688
LUADMRPL55MRPL39-1.10494529815920.00471395891927286
THCAMRPL55MRPL41-3.881885435542690.00492925389458784
KIRPMRPL55MRPL281.108486998522810.00779616041108966
PRADMRPL55ICT1-1.548484449093520.00907723161841939
COADMRPL55MRPL51-1.841478771107280.0110453069210053
STADMRPL55MRPL10-4.874616673958710.0118026207201183
COADMRPL55MRPL39-1.152859532917560.0357243716716767
LUSCMRPL55MRPL28-2.178702421774491.51941378521463e-05
LUSCMRPL55MRPL10-2.4407157469411.79996309233889e-05
BRCAMRPL55ICT1-4.174882204496642.73719348917167e-14
LUSCMRPL55MRPL40-8.459972144074983.09303724812157e-05
PRADMRPL55MRPL37-2.210743427352953.65283830814974e-07
LUADMRPL55MRPL37-2.865492009939713.76287422734829e-10
LIHCMRPL55MRPL39-1.654616833862163.95799979560965e-08
LUADMRPL55MRPL10-5.605793732115514.11637918366747e-07
PRADMRPL55MRPL411.311796863072164.41809300064344e-05
LUSCMRPL55MRPL52-1.626326472513575.03439574503487e-05
BRCAMRPL55MRPL51-2.916314745023695.42627121034746e-18
LUADMRPL55MRPL52-3.105284945240965.46286040022975e-07
LUADMRPL55MRPL28-1.410315038376365.67286357063566e-05
LUSCMRPL55ICT1-3.230933760494566.60526357089358e-07
KICHMRPL55MRPL411.051036513195637.49826431274414e-05
KIRCMRPL55MRPL51-1.597736486694698.46797387064351e-07
BRCAMRPL55MRPL37-3.790795514180269.33185484212232e-10
LUADMRPL55MRPL51-1.445852710872639.92276876427582e-07


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with MRPL55
ICT1, MRPL23, MRPL32, MRPS9, MRPL13, MRPL52, MRPL39, MRPL51, MRPL41, MRPL9, MRPL3, MRPL15, HNRNPM, TOMM40, ILF2, FLOT1, RPS23, ILF3, RPL13, RBMS3, MRPL28, HNRNPDL, MRPL46, MRPL4, MRPL37, MRPS30, MRPL47, MRPL40, MRPL48, HNRNPD, MYO1C, PLK1, RAB5C, SORT1, CBX4, CHORDC1, MRPL50, UGGT1, PARD6B, BAG6, Rab5c, Cdc26, Cdca5, Cdkn2aip, MRPL10, MRPL42, MRPL12, MRPL35, PRKCZ, MEPCE, RECQL4, MRM1, LTN1, SNRNP70, TNK2, ORF8, IMMP2L, ACAD9, AUH, C12orf65, C1QBP, C21orf33, C6orf203, CS, GFM1, HINT2, MDH2, METTL15, METTL17, MRPL11, MRPS12, MRPS26, MRRF, MTERF3, MTG2, MTIF2, MTIF3, MTRF1, MTRF1L, PMPCA, PMPCB, RPUSD4, SLIRP, SSBP1, TACO1, TBRG4, TFAM, TRUB2, TSFM, VWA8, CLPP, MAFB, AARS2, FZR1, RPL19, MRPL2, RBMS2, HNRNPU, SRSF4, MALSU1, H1FNT, RPL37, MRPL30, MRPL53, SRSF3, RPL27A, MRPL18, RPL13A, RPL17, YBX2, SRSF7, RPS8, RPL4, RPL23A, RPL35, MRPS18A, RPL10, FAHD1, MRPL27, LIN28A, GADD45GIP1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo
MRPL55chr1228295369CTsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
MRPL55ESCAchr1228294529228294529CTMissense_Mutationp.E143K3
MRPL55UCECchr1228295393228295393GASilentp.Y1042
MRPL55UCECchr1228295714228295714CTMissense_Mutationp.R33Q2
MRPL55ESCAchr1228294529228294529CTMissense_Mutation2
MRPL55UCECchr1228294562228294562GAMissense_Mutationp.R132C2
MRPL55SARCchr1228295766228295766GTMissense_Mutationp.L16I1
MRPL55COADchr1228294496228294496GAMissense_Mutationp.R118C1
MRPL55LIHCchr1228295527228295527GAMissense_Mutation1
MRPL55SKCMchr1228295420228295420CTSilentp.Q59Q1
MRPL55COADchr1228294608228294608AGSilentp.D80D1
MRPL55LIHCchr1228295447228295447TCSilent1
MRPL55SKCMchr1228295508228295508GAMissense_Mutationp.S66F1
MRPL55COADchr1228295518228295518GAMissense_Mutationp.H27Y1
MRPL55LIHCchr1228294574228294574TCMissense_Mutation1
MRPL55SKCMchr1228295420228295420CTSilentp.Q95Q1
MRPL55LIHCchr1228295710228295710GCSilentp.G34G1
MRPL55STADchr1228294543228294543GAMissense_Mutationp.S138L1
MRPL55LUADchr1228294558228294558TCMissense_Mutationp.E133G1
MRPL55STADchr1228295438228295438GTSilentp.P89P1
MRPL55GBMchr1228294495228294495CTMissense_Mutationp.R154H1
MRPL55LUADchr1228294558228294558TCMissense_Mutationp.E97G1
MRPL55STADchr1228294490228294490GANonsense_Mutationp.R156X1
MRPL55HNSCchr1228295553228295553GAMissense_Mutationp.T51I1
MRPL55LUSCchr1228295503228295503GANonsense_Mutationp.R68*1
MRPL55STADchr1228295696228295696CAMissense_Mutationp.G39V1
MRPL55HNSCchr1228295431228295431GTMissense_Mutationp.L92M1
MRPL55SARCchr1228295766228295766GTMissense_Mutation1
MRPL55BLCAchr1228295526228295526CTMissense_Mutation1
MRPL55STADchr1228294490228294490GANonsense_Mutationp.R120*1
MRPL55HNSCchr1228295553228295553GAMissense_Mutationp.T15I1
MRPL55SARCchr1228295982228295982GTMissense_Mutation1
MRPL55BLCAchr1228294489228294489CTMissense_Mutation1
MRPL55STADchr1228294543228294543GAMissense_Mutationp.S102L1
MRPL55LGGchr1228294577228294577CTMissense_Mutationp.A127T1
MRPL55SARCchr1228294568228294568GAMissense_Mutation1
MRPL55BLCAchr1228295526228295526CTMissense_Mutationp.R60H1
MRPL55LGGchr1228294577228294577CTMissense_Mutation1

check buttonCopy number variation (CNV) of MRPL55
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across MRPL55
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
82676N/AAI086220SLC25A39chr1742397139+MRPL55chr1228296954-


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRPMRPL550.000431191346297120.012
ESCAMRPL550.006473599177249730.17
THCAMRPL550.01312438408152870.34
CHOLMRPL550.01765227682430.44
COADMRPL550.01798281505990670.44
LIHCMRPL550.0231061866798730.53
HNSCMRPL550.03060580913198850.67

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUADMRPL550.041739582513661
LUSCMRPL550.01341691175270150.42
THCAMRPL550.001640527256451250.052
LGGMRPL550.0002633190739763670.0087

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source