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Translation Factor: RPS4Y1 (NCBI Gene ID:6192) |
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Gene Summary |
| Gene Information | Gene Name: RPS4Y1 | Gene ID: 6192 | Gene Symbol | RPS4Y1 | Gene ID | 6192 |
| Gene Name | ribosomal protein S4 Y-linked 1 | |
| Synonyms | RPS4Y|S4 | |
| Cytomap | Yp11.2 | |
| Type of Gene | protein-coding | |
| Description | 40S ribosomal protein S4, Y isoform 140S ribosomal protein S4, Yribosomal protein S4, Y-linkedribosomal protein S4Ysmall ribosomal subunit protein eS4 | |
| Modification date | 20200313 | |
| UniProtAcc | P22090 | |
Child GO biological process term(s) under GO:0006412 |
| GO ID | GO term |
| GO:0005840 | Ribosome |
| GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
Inferred gene age of translation factor. |
| Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
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We searched PubMed using 'RPS4Y1[title] AND translation [title] AND human.' |
| Gene | Title | PMID |
| RPS4Y1 | . | . |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
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Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
| ENST00000250784 | 2713686 | 2713784 | Frame-shift |
| ENST00000250784 | 2722640 | 2722812 | Frame-shift |
| ENST00000250784 | 2733128 | 2733286 | Frame-shift |
Exon skipping position in the amino acid sequence. |
| ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
Potentially (partially) lost protein functional features of UniProt. |
| UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
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Gene expression level across TCGA pancancer |
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Gene expression level across GTEx pantissue |
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Expression level of gene isoforms across TCGA pancancer |
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Expression level of gene isoforms across GTEx pantissue |
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Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
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Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
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| Cancer type | Translation factor | FC | adj.pval |
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Translation factor expression regulation through miRNA binding |
| Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
| Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
| Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
| Cancer type | Gene | Coefficient | Pvalue |
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Strongly correlated genes belong to cellular important gene groups with RPS4Y1 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
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| Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
| ACC | Epifactor | RPS4Y1 | UTY | 0.95870358 | 8.48E-44 |
| ACC | Epifactor | RPS4Y1 | KDM5D | 0.978167337 | 2.68E-54 |
| ACC | IUPHAR | RPS4Y1 | PRKY | 0.949974972 | 1.16E-40 |
| ACC | IUPHAR | RPS4Y1 | KDM5D | 0.978167337 | 2.68E-54 |
| ACC | Kinase | RPS4Y1 | PRKY | 0.949974972 | 1.16E-40 |
| ACC | TF | RPS4Y1 | ZFY | 0.979914155 | 1.12E-55 |
| BLCA | Epifactor | RPS4Y1 | UTY | 0.920029977 | 1.28E-174 |
| BLCA | Epifactor | RPS4Y1 | KDM5D | 0.943218134 | 4.70E-205 |
| BLCA | IUPHAR | RPS4Y1 | PRKY | 0.94064564 | 4.28E-201 |
| BLCA | IUPHAR | RPS4Y1 | KDM5D | 0.943218134 | 4.70E-205 |
| BLCA | Kinase | RPS4Y1 | PRKY | 0.94064564 | 4.28E-201 |
| BLCA | TF | RPS4Y1 | ZFY | 0.960941464 | 1.13E-238 |
| BRCA | Epifactor | RPS4Y1 | UTY | 0.892459526 | 0 |
| BRCA | Epifactor | RPS4Y1 | KDM5D | 0.904468595 | 0 |
| BRCA | IUPHAR | RPS4Y1 | KDM5D | 0.904468595 | 0 |
| BRCA | TF | RPS4Y1 | ZFY | 0.808076241 | 9.59E-282 |
| CESC | Epifactor | RPS4Y1 | KDM5D | 0.818027474 | 1.76E-75 |
| CESC | IUPHAR | RPS4Y1 | KDM5D | 0.818027474 | 1.76E-75 |
| CHOL | Epifactor | RPS4Y1 | KDM5D | 0.988735109 | 4.16E-37 |
| CHOL | Epifactor | RPS4Y1 | UTY | 0.992094475 | 2.12E-40 |
| CHOL | IUPHAR | RPS4Y1 | PRKY | 0.948835574 | 3.78E-23 |
| CHOL | IUPHAR | RPS4Y1 | KDM5D | 0.988735109 | 4.16E-37 |
| CHOL | Kinase | RPS4Y1 | PRKY | 0.948835574 | 3.78E-23 |
| CHOL | TF | RPS4Y1 | ZFY | 0.9803445 | 6.04E-32 |
| COAD | Epifactor | RPS4Y1 | UTY | 0.946827506 | 4.20E-163 |
| COAD | Epifactor | RPS4Y1 | KDM5D | 0.960216951 | 3.19E-183 |
| COAD | IUPHAR | RPS4Y1 | PRKY | 0.920648324 | 1.26E-135 |
| COAD | IUPHAR | RPS4Y1 | KDM5D | 0.960216951 | 3.19E-183 |
| COAD | Kinase | RPS4Y1 | PRKY | 0.920648324 | 1.26E-135 |
| COAD | TF | RPS4Y1 | ZFY | 0.958951761 | 4.81E-181 |
| DLBC | Epifactor | RPS4Y1 | UTY | 0.957610899 | 1.67E-26 |
| DLBC | Epifactor | RPS4Y1 | KDM5D | 0.966057514 | 1.10E-28 |
| DLBC | IUPHAR | RPS4Y1 | PRKY | 0.931646381 | 7.47E-22 |
| DLBC | IUPHAR | RPS4Y1 | KDM5D | 0.966057514 | 1.10E-28 |
| DLBC | Kinase | RPS4Y1 | PRKY | 0.931646381 | 7.47E-22 |
| DLBC | TF | RPS4Y1 | ZFY | 0.947819805 | 1.79E-24 |
| ESCA | Epifactor | RPS4Y1 | UTY | 0.919118805 | 2.07E-80 |
| ESCA | Epifactor | RPS4Y1 | KDM5D | 0.937059937 | 1.36E-90 |
| ESCA | IUPHAR | RPS4Y1 | KDM5D | 0.937059937 | 1.36E-90 |
| ESCA | IUPHAR | RPS4Y1 | PRKY | 0.938437697 | 1.70E-91 |
| ESCA | Kinase | RPS4Y1 | PRKY | 0.938437697 | 1.70E-91 |
| ESCA | TF | RPS4Y1 | ZFY | 0.981124199 | 2.13E-140 |
| GBM | Epifactor | RPS4Y1 | KDM5D | 0.968073136 | 4.43E-104 |
| GBM | Epifactor | RPS4Y1 | UTY | 0.977845075 | 2.17E-117 |
| GBM | IUPHAR | RPS4Y1 | PRKY | 0.881010531 | 3.82E-57 |
| GBM | IUPHAR | RPS4Y1 | KDM5D | 0.968073136 | 4.43E-104 |
| GBM | Kinase | RPS4Y1 | PRKY | 0.881010531 | 3.82E-57 |
| GBM | TF | RPS4Y1 | ZFY | 0.978607088 | 1.15E-118 |
| HNSC | Epifactor | RPS4Y1 | UTY | 0.919207342 | 1.91E-230 |
| HNSC | Epifactor | RPS4Y1 | KDM5D | 0.936159445 | 3.23E-258 |
| HNSC | IUPHAR | RPS4Y1 | PRKY | 0.903447482 | 1.27E-209 |
| HNSC | IUPHAR | RPS4Y1 | KDM5D | 0.936159445 | 3.23E-258 |
| HNSC | Kinase | RPS4Y1 | PRKY | 0.903447482 | 1.27E-209 |
| HNSC | TF | RPS4Y1 | ZFY | 0.942481198 | 1.36E-270 |
| KICH | Epifactor | RPS4Y1 | UTY | 0.981593908 | 8.75E-66 |
| KICH | Epifactor | RPS4Y1 | KDM5D | 0.991885644 | 1.62E-81 |
| KICH | IUPHAR | RPS4Y1 | PRKY | 0.920499022 | 4.36E-38 |
| KICH | IUPHAR | RPS4Y1 | KDM5D | 0.991885644 | 1.62E-81 |
| KICH | Kinase | RPS4Y1 | PRKY | 0.920499022 | 4.36E-38 |
| KICH | TF | RPS4Y1 | ZFY | 0.983152516 | 1.76E-67 |
| KIRP | Epifactor | RPS4Y1 | UTY | 0.94849484 | 2.63E-162 |
| KIRP | Epifactor | RPS4Y1 | KDM5D | 0.971972062 | 6.77E-204 |
| KIRP | IUPHAR | RPS4Y1 | PRKY | 0.859041401 | 2.31E-95 |
| KIRP | IUPHAR | RPS4Y1 | KDM5D | 0.971972062 | 6.77E-204 |
| KIRP | Kinase | RPS4Y1 | PRKY | 0.859041401 | 2.31E-95 |
| KIRP | TF | RPS4Y1 | ZFY | 0.946204091 | 2.36E-159 |
| LAML | Epifactor | RPS4Y1 | KDM5D | 0.992755477 | 2.64E-159 |
| LAML | Epifactor | RPS4Y1 | UTY | 0.994465101 | 2.87E-169 |
| LAML | IUPHAR | RPS4Y1 | PRKY | 0.978509806 | 3.45E-119 |
| LAML | IUPHAR | RPS4Y1 | KDM5D | 0.992755477 | 2.64E-159 |
| LAML | Kinase | RPS4Y1 | PRKY | 0.978509806 | 3.45E-119 |
| LAML | TF | RPS4Y1 | ZFY | 0.992085729 | 4.93E-156 |
| LGG | Epifactor | RPS4Y1 | UTY | 0.986439418 | 0 |
| LGG | Epifactor | RPS4Y1 | KDM5D | 0.987902206 | 0 |
| LGG | IUPHAR | RPS4Y1 | PRKY | 0.943294122 | 4.98E-255 |
| LGG | IUPHAR | RPS4Y1 | KDM5D | 0.987902206 | 0 |
| LGG | Kinase | RPS4Y1 | PRKY | 0.943294122 | 4.98E-255 |
| LGG | TF | RPS4Y1 | ZFY | 0.985696038 | 0 |
| LIHC | Epifactor | RPS4Y1 | KDM5D | 0.954006535 | 2.23E-222 |
| LIHC | Epifactor | RPS4Y1 | UTY | 0.955371645 | 4.53E-225 |
| LIHC | IUPHAR | RPS4Y1 | PRKY | 0.9182729 | 1.71E-171 |
| LIHC | IUPHAR | RPS4Y1 | KDM5D | 0.954006535 | 2.23E-222 |
| LIHC | Kinase | RPS4Y1 | PRKY | 0.9182729 | 1.71E-171 |
| LIHC | TF | RPS4Y1 | ZFY | 0.941813489 | 1.90E-201 |
| LUAD | Epifactor | RPS4Y1 | KDM5D | 0.979114671 | 0 |
| LUAD | Epifactor | RPS4Y1 | UTY | 0.980233509 | 0 |
| LUAD | IUPHAR | RPS4Y1 | PRKY | 0.943272764 | 4.95E-277 |
| LUAD | IUPHAR | RPS4Y1 | KDM5D | 0.979114671 | 0 |
| LUAD | Kinase | RPS4Y1 | PRKY | 0.943272764 | 4.95E-277 |
| LUAD | TF | RPS4Y1 | ZFY | 0.984765895 | 0 |
| LUSC | Epifactor | RPS4Y1 | UTY | 0.948865211 | 4.37E-278 |
| LUSC | Epifactor | RPS4Y1 | KDM5D | 0.955308672 | 8.27E-294 |
| LUSC | IUPHAR | RPS4Y1 | PRKY | 0.887181364 | 3.17E-187 |
| LUSC | IUPHAR | RPS4Y1 | KDM5D | 0.955308672 | 8.27E-294 |
| LUSC | Kinase | RPS4Y1 | PRKY | 0.887181364 | 3.17E-187 |
| LUSC | TF | RPS4Y1 | ZFY | 0.96660787 | 0 |
| MESO | Epifactor | RPS4Y1 | UTY | 0.952595684 | 1.07E-45 |
| MESO | Epifactor | RPS4Y1 | KDM5D | 0.985629094 | 1.98E-67 |
| MESO | IUPHAR | RPS4Y1 | PRKY | 0.955296709 | 9.36E-47 |
| MESO | IUPHAR | RPS4Y1 | KDM5D | 0.985629094 | 1.98E-67 |
| MESO | Kinase | RPS4Y1 | PRKY | 0.955296709 | 9.36E-47 |
| MESO | TF | RPS4Y1 | ZFY | 0.973998049 | 1.37E-56 |
| PAAD | Epifactor | RPS4Y1 | UTY | 0.980408208 | 1.17E-129 |
| PAAD | Epifactor | RPS4Y1 | KDM5D | 0.983431617 | 3.47E-136 |
| PAAD | IUPHAR | RPS4Y1 | PRKY | 0.943662174 | 7.33E-89 |
| PAAD | IUPHAR | RPS4Y1 | KDM5D | 0.983431617 | 3.47E-136 |
| PAAD | Kinase | RPS4Y1 | PRKY | 0.943662174 | 7.33E-89 |
| PAAD | TF | RPS4Y1 | ZFY | 0.968385785 | 4.39E-111 |
| PCPG | Epifactor | RPS4Y1 | UTY | 0.979093203 | 6.71E-130 |
| PCPG | Epifactor | RPS4Y1 | KDM5D | 0.983286449 | 8.26E-139 |
| PCPG | IUPHAR | RPS4Y1 | PRKY | 0.947052872 | 3.27E-93 |
| PCPG | IUPHAR | RPS4Y1 | KDM5D | 0.983286449 | 8.26E-139 |
| PCPG | Kinase | RPS4Y1 | PRKY | 0.947052872 | 3.27E-93 |
| PCPG | TF | RPS4Y1 | ZFY | 0.98173676 | 2.81E-135 |
| READ | Epifactor | RPS4Y1 | UTY | 0.963147563 | 1.48E-60 |
| READ | Epifactor | RPS4Y1 | KDM5D | 0.974159743 | 2.24E-68 |
| READ | IUPHAR | RPS4Y1 | PRKY | 0.939356866 | 1.12E-49 |
| READ | IUPHAR | RPS4Y1 | KDM5D | 0.974159743 | 2.24E-68 |
| READ | Kinase | RPS4Y1 | PRKY | 0.939356866 | 1.12E-49 |
| READ | TF | RPS4Y1 | ZFY | 0.977623599 | 1.48E-71 |
| SKCM | Epifactor | RPS4Y1 | UTY | 0.952423273 | 1.06E-245 |
| SKCM | Epifactor | RPS4Y1 | KDM5D | 0.968170566 | 4.42E-286 |
| SKCM | IUPHAR | RPS4Y1 | PRKY | 0.932697934 | 3.50E-211 |
| SKCM | IUPHAR | RPS4Y1 | KDM5D | 0.968170566 | 4.42E-286 |
| SKCM | Kinase | RPS4Y1 | PRKY | 0.932697934 | 3.50E-211 |
| SKCM | TF | RPS4Y1 | ZFY | 0.956690922 | 4.13E-255 |
| STAD | Epifactor | RPS4Y1 | UTY | 0.961631149 | 8.92E-254 |
| STAD | Epifactor | RPS4Y1 | KDM5D | 0.969537166 | 7.79E-276 |
| STAD | IUPHAR | RPS4Y1 | PRKY | 0.951920166 | 2.63E-232 |
| STAD | IUPHAR | RPS4Y1 | KDM5D | 0.969537166 | 7.79E-276 |
| STAD | Kinase | RPS4Y1 | PRKY | 0.951920166 | 2.63E-232 |
| STAD | TF | RPS4Y1 | ZFY | 0.978079031 | 1.98E-307 |
| THCA | Epifactor | RPS4Y1 | UTY | 0.987206677 | 0 |
| THCA | Epifactor | RPS4Y1 | KDM5D | 0.989562281 | 0 |
| THCA | IUPHAR | RPS4Y1 | PRKY | 0.864457279 | 2.17E-172 |
| THCA | IUPHAR | RPS4Y1 | KDM5D | 0.989562281 | 0 |
| THCA | Kinase | RPS4Y1 | PRKY | 0.864457279 | 2.17E-172 |
| THCA | TF | RPS4Y1 | ZFY | 0.984137149 | 0 |
| THYM | Epifactor | RPS4Y1 | KDM5D | 0.984998373 | 2.00E-93 |
| THYM | Epifactor | RPS4Y1 | UTY | 0.987489192 | 4.00E-98 |
| THYM | IUPHAR | RPS4Y1 | PRKY | 0.954216189 | 9.61E-65 |
| THYM | IUPHAR | RPS4Y1 | KDM5D | 0.984998373 | 2.00E-93 |
| THYM | Kinase | RPS4Y1 | PRKY | 0.954216189 | 9.61E-65 |
| THYM | TF | RPS4Y1 | SRY | 0.845625299 | 1.64E-34 |
| THYM | TF | RPS4Y1 | ZFY | 0.963399862 | 1.85E-70 |
| UCS | Epifactor | RPS4Y1 | KDM5D | 0.984998373 | 2.00E-93 |
| UCS | Epifactor | RPS4Y1 | UTY | 0.987489192 | 4.00E-98 |
| UCS | IUPHAR | RPS4Y1 | PRKY | 0.954216189 | 9.61E-65 |
| UCS | IUPHAR | RPS4Y1 | KDM5D | 0.984998373 | 2.00E-93 |
| UCS | Kinase | RPS4Y1 | PRKY | 0.954216189 | 9.61E-65 |
| UCS | TF | RPS4Y1 | SRY | 0.845625299 | 1.64E-34 |
| UCS | TF | RPS4Y1 | ZFY | 0.963399862 | 1.85E-70 |
| UVM | Epifactor | RPS4Y1 | UTY | 0.960951572 | 2.82E-45 |
| UVM | Epifactor | RPS4Y1 | KDM5D | 0.978842571 | 1.65E-55 |
| UVM | IUPHAR | RPS4Y1 | PRKY | 0.880836042 | 4.76E-27 |
| UVM | IUPHAR | RPS4Y1 | KDM5D | 0.978842571 | 1.65E-55 |
| UVM | Kinase | RPS4Y1 | PRKY | 0.880836042 | 4.76E-27 |
| UVM | TF | RPS4Y1 | ZFY | 0.918779571 | 3.20E-33 |
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Protein 3D structureVisit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
![]() * Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
| Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
| PPI interactors with RPS4Y1 |
| CALM1, CD81, IGSF8, ICAM1, RNF2, RPS4Y2, PRPS1, CLK1, ZNF746, CYLD, FGF11, ESR2, HEXIM1, MEPCE, LARP7, NR2C2, MEOX2, PLEKHA4, SNIP1, M, nsp13, nsp4, nsp5, nsp6, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, CBX8, WHSC1L1, AR, ACTR3B, ACOT7, PHYHIPL, CA5B, CCT3, RBKS, NCAPD3, PADI4, C1orf123, NEU2, TMCC2, RPL10A, AGPAT1, HSPBP1, RPS15, ACTR3, ZZEF1, AK3, SSSCA1, PINK1, WRAP53, SLURP1, RPS19, WDR37, SDC3, RPSAP58, FTL, YTHDF1, UGT3A1, HINT3, RPS8, LTV1, ZC3H10, SHMT2, CD55, ALDOA, RPL23A, NEUROG3, HECTD3, SPRTN, |
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Clinically associated variants from ClinVar. |
| Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
| Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
Copy number variation (CNV) of RPS4Y1 * Click on the image to open the original image in a new window. |
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Fusion gene breakpoints (product of the structural variants (SVs)) across RPS4Y1 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion genes with this translation factor from FusionGDB2.0. |
| FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 103203 | N/A | BF340665 | ACADVL | chr17 | 7128585 | + | RPS4Y1 | chrY | 2758841 | + |
| 103203 | N/A | BD237243 | ADIRF | chr10 | 88730488 | + | RPS4Y1 | chrY | 2758842 | + |
| 103203 | N/A | AF116711 | ALB | chr4 | 74281996 | - | RPS4Y1 | chrY | 2709643 | + |
| 103203 | N/A | AA525486 | CABLES1 | chr18 | 20808709 | - | RPS4Y1 | chrY | 2734997 | - |
| 103203 | PAAD | TCGA-F2-A7TX | DHRSX | chrX | 2209543 | - | RPS4Y1 | chrY | 2733129 | + |
| 103203 | PAAD | TCGA-F2-A7TX | DHRSX | chrY | 2159542 | - | RPS4Y1 | chrY | 2733128 | + |
| 103203 | PAAD | TCGA-F2-A7TX-01A | DHRSX | chrY | 2159543 | - | RPS4Y1 | chrY | 2733129 | + |
| 103203 | N/A | EI796321 | FCHSD2 | chr11 | 72808161 | - | RPS4Y1 | chrY | 2610246 | + |
| 103203 | N/A | AI147734 | PIWIL1 | chr12 | 130893959 | + | RPS4Y1 | chrY | 2752404 | - |
| 103203 | N/A | AW300778 | RPS19 | chr19 | 42364325 | - | RPS4Y1 | chrY | 2734859 | + |
| 100335 | N/A | BI047537 | RPS4Y1 | chrY | 2733176 | + | ARGLU1 | chr13 | 107220075 | + |
| 97159 | GBM | TCGA-06-0132-01A | RPS4Y1 | chrY | 2712298 | + | CDH13 | chr16 | 83158990 | + |
| 100283 | STAD | TCGA-RD-A7BT-01A | RPS4Y1 | chrY | 2713784 | + | DHRSX | chrY | 2260515 | - |
| 89814 | N/A | EC580829 | RPS4Y1 | chrY | 2753051 | - | EIF3D | chr22 | 36906903 | + |
| 97936 | N/A | CB054335 | RPS4Y1 | chrY | 2758836 | - | FNBP1 | chr9 | 132654163 | + |
| 77951 | N/A | BI495156 | RPS4Y1 | chrY | 2734988 | + | LINC00366 | chr13 | 39146582 | + |
| 77951 | N/A | BQ351516 | RPS4Y1 | chrY | 2733263 | + | MKNK2 | chr19 | 2037878 | + |
| 103203 | N/A | BF810102 | RPS4Y1 | chrY | 2715654 | + | RPS4Y1 | chrY | 2715518 | - |
| 103203 | N/A | CB049280 | SMAD2 | chr18 | 45363929 | - | RPS4Y1 | chrY | 2734988 | - |
| 103203 | GBM | TCGA-06-0132-01A | SRCAP | chr16 | 30727800 | + | RPS4Y1 | chrY | 2722641 | + |
| 103204 | N/A | EC465045 | ZRANB2-AS1 | chr1 | 71515651 | - | RPS4Y1 | chrY | 2734834 | + |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
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| Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
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| Cancer type | Translation factor | pval | adj.p |
| TGCT | RPS4Y1 | 0.0131500789148087 | 0.013 |
| ESCA | RPS4Y1 | 1.07130202086949e-18 | 9.6e-18 |
| LUSC | RPS4Y1 | 1.09390469832596e-71 | 2.4e-70 |
| LIHC | RPS4Y1 | 1.15196170977466e-63 | 2.3e-62 |
| THYM | RPS4Y1 | 1.65605361677016e-21 | 1.8e-20 |
| COAD | RPS4Y1 | 1.67630067703086e-53 | 3e-52 |
| KIRC | RPS4Y1 | 1.89633269722089e-87 | 5.1e-86 |
| UVM | RPS4Y1 | 1.96021999823571e-14 | 1.2e-13 |
| BRCA | RPS4Y1 | 2.1139827627896e-20 | 2.1e-19 |
| BLCA | RPS4Y1 | 2.18748701281115e-56 | 4.2e-55 |
| KIRP | RPS4Y1 | 2.33371114703326e-41 | 3.7e-40 |
| LGG | RPS4Y1 | 2.47940778597488e-86 | 6.4e-85 |
| LAML | RPS4Y1 | 2.50685696211605e-32 | 3.8e-31 |
| STAD | RPS4Y1 | 2.53112267444388e-69 | 5.3e-68 |
| ACC | RPS4Y1 | 3.30149139032644e-14 | 1.7e-13 |
| PCPG | RPS4Y1 | 3.34186924324147e-32 | 4.7e-31 |
| DLBC | RPS4Y1 | 3.44060419479513e-09 | 1e-08 |
| PAAD | RPS4Y1 | 3.56513630089674e-31 | 4.6e-30 |
| READ | RPS4Y1 | 4.03524212666965e-18 | 3.2e-17 |
| LUAD | RPS4Y1 | 4.25964790062367e-96 | 1.2e-94 |
| HNSC | RPS4Y1 | 4.34722958285396e-73 | 1e-71 |
| SARC | RPS4Y1 | 4.91567994863942e-45 | 8.4e-44 |
| MESO | RPS4Y1 | 5.03758590774822e-10 | 2e-09 |
| SKCM | RPS4Y1 | 5.83143851814514e-75 | 1.4e-73 |
| KICH | RPS4Y1 | 6.85480567396137e-16 | 4.8e-15 |
| THCA | RPS4Y1 | 6.98763656566539e-80 | 1.7e-78 |
| GBM | RPS4Y1 | 7.20624186303352e-28 | 8.6e-27 |
| CHOL | RPS4Y1 | 9.25673590399124e-09 | 1.9e-08 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
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| Cancer type | Translation factor | pval | adj.p |
| STAD | RPS4Y1 | 0.0183363485272767 | 0.57 |
| KIRC | RPS4Y1 | 4.0499515858376e-05 | 0.0013 |
| KICH | RPS4Y1 | 0.0193046005236163 | 0.58 |
| CHOL | RPS4Y1 | 0.0233358849088145 | 0.68 |
| HNSC | RPS4Y1 | 0.0130624619559932 | 0.42 |
| READ | RPS4Y1 | 0.0257069804909004 | 0.72 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
| UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
| Disease ID | Disease Name | # PubMeds | Disease source |