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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: MRPS11 (NCBI Gene ID:64963)


Gene Summary

check button Gene Summary
Gene InformationGene Name: MRPS11
Gene ID: 64963
Gene Symbol

MRPS11

Gene ID

64963

Gene Namemitochondrial ribosomal protein S11
SynonymsHCC-2|MRP-S11|S11mt
Cytomap

15q25.3

Type of Geneprotein-coding
Description28S ribosomal protein S11, mitochondrialcervical cancer proto-oncogene 2 proteinmitochondrial small ribosomal subunit protein uS11m
Modification date20200320
UniProtAcc

P82912


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0032543Mitochondrial translation
GO:0005840Ribosome
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID


check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
MRPS11>1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'MRPS11[title] AND translation [title] AND human.'
GeneTitlePMID
MRPS11..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST000003258448901585789015956In-frame
ENST000003258448901834089018470Frame-shift
ENST000003258448902021989020285In-frame

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST00000325844890158578901595618794485461946193
ENST0000032584489020219890202851879677742194137159

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.
P8291261936294Alternative sequenceID=VSP_005720;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:15489334;Dbxref=PMID:15489334


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
THCAMRPS11-3.106947285409620.0252226935182201
BLCAMRPS11-2.302769989682190.040130615234375
BRCAMRPS11-1.243049779768042.31302509538916e-07
LUSCMRPS11-2.90040975414445.43966600483641e-07


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
HNSCMRPS11210.04054301317421810.2197925925925930.1374769911504420.00808160228860999-0.21767497588251
LIHCMRPS11210.030255757465140.2239370370370370.1215825206501470.1681266022884-0.216378373730659

check buttonTranslation factor expression regulation through copy number variation of Translation factor
Cancer typeGeneCoefficientPvalue
LAMLMRPS11-0.0348900820.018050342
LGGMRPS110.0885453760.026481063
LUSCMRPS110.1068543160.034647223
UVMMRPS110.1760764420.048193449

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with MRPS11 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
DLBCCell metabolism geneMRPS11POLR2F0.8008745268.24E-12
DLBCCell metabolism geneMRPS11POLR2L0.8015349147.69E-12
DLBCCell metabolism geneMRPS11MIF0.8034974186.26E-12
DLBCCell metabolism geneMRPS11PSMC30.8078519443.93E-12
DLBCCell metabolism geneMRPS11TIMM130.8105734922.92E-12
DLBCCell metabolism geneMRPS11HSD17B100.8178300491.29E-12
DLBCCell metabolism geneMRPS11PSMB30.8208276139.14E-13
DLBCCell metabolism geneMRPS11TPI10.8343365941.76E-13
DLBCCell metabolism geneMRPS11SNRPD30.8360560521.41E-13
DLBCCell metabolism geneMRPS11NME20.8371063861.23E-13
DLBCCell metabolism geneMRPS11PSMD130.8441655194.82E-14
DLBCCell metabolism geneMRPS11TOMM220.8549531211.05E-14
DLBCCell metabolism geneMRPS11PSMA40.887135934.68E-17
DLBCEpifactorMRPS11RBX10.8408888317.49E-14
DLBCIUPHARMRPS11MFSD2B0.8023757417.04E-12
DLBCTFMRPS11NME20.8371063861.23E-13
DLBCTSGMRPS11GADD45GIP10.8124994662.36E-12
DLBCTSGMRPS11PARK70.8131887322.19E-12
DLBCTSGMRPS11ST200.8341057471.81E-13
GBMCell metabolism geneMRPS11CYC10.8058727371.53E-40
GBMCell metabolism geneMRPS11PSMB30.8328482651.57E-45
PRADCell metabolism geneMRPS11PSMB60.8085025562.77E-128
PRADCell metabolism geneMRPS11PSMB30.8105060922.10E-129
PRADCell metabolism geneMRPS11TIMM500.8129812248.28E-131
PRADCell metabolism geneMRPS11POLR2I0.8142160391.62E-131
PRADCell metabolism geneMRPS11ATP5G10.8209788641.73E-135
PRADCell metabolism geneMRPS11HSD17B100.8355550831.18E-144
PRADCGCMRPS11ASPSCR10.8028113063.59E-125
PRADEpifactorMRPS11RBX10.8023485146.37E-125
PRADIUPHARMRPS11PSMB60.8085025562.77E-128
PRADTSGMRPS11PHB0.800674464.99E-124
PRADTSGMRPS11GADD45GIP10.8155632092.70E-132
THCACell metabolism geneMRPS11ATP5G10.8013818412.53E-129
THCACell metabolism geneMRPS11HSD17B100.8041159147.47E-131
THYMCell metabolism geneMRPS11SNRPD10.8000168692.15E-28
THYMCell metabolism geneMRPS11TXN0.8020380521.25E-28
THYMCell metabolism geneMRPS11GMPPA0.8048920855.72E-29
THYMCell metabolism geneMRPS11GSTZ10.8051456235.33E-29
THYMCell metabolism geneMRPS11FPGS0.8054833564.86E-29
THYMCell metabolism geneMRPS11PCYT20.8065936133.57E-29
THYMCell metabolism geneMRPS11TAZ0.8066372993.53E-29
THYMCell metabolism geneMRPS11MVD0.8069110873.27E-29
THYMCell metabolism geneMRPS11PSME10.8109181751.06E-29
THYMCell metabolism geneMRPS11DHRS40.8129547325.88E-30
THYMCell metabolism geneMRPS11SRM0.8130929915.65E-30
THYMCell metabolism geneMRPS11PSMC50.8168124211.91E-30
THYMCell metabolism geneMRPS11DPM20.8173966731.60E-30
THYMCell metabolism geneMRPS11GCDH0.8175015471.55E-30
THYMCell metabolism geneMRPS11LSM50.8175630411.53E-30
THYMCell metabolism geneMRPS11POLE40.8209836295.46E-31
THYMCell metabolism geneMRPS11SLC27A50.8221403143.84E-31
THYMCell metabolism geneMRPS11AK20.8223916033.56E-31
THYMCell metabolism geneMRPS11DHRS4L20.8227168153.22E-31
THYMCell metabolism geneMRPS11PPCDC0.8245835581.81E-31
THYMCell metabolism geneMRPS11CCT70.8253017251.45E-31
THYMCell metabolism geneMRPS11ITPA0.8255413971.34E-31
THYMCell metabolism geneMRPS11PSMA60.8257762351.25E-31
THYMCell metabolism geneMRPS11TPI10.8258787581.21E-31
THYMCell metabolism geneMRPS11PSMC40.8275168047.22E-32
THYMCell metabolism geneMRPS11UROS0.8290918224.38E-32
THYMCell metabolism geneMRPS11NME10.829299314.10E-32
THYMCell metabolism geneMRPS11POLR3K0.8307065642.61E-32
THYMCell metabolism geneMRPS11TIMM100.8309387842.42E-32
THYMCell metabolism geneMRPS11PREB0.8311505742.26E-32
THYMCell metabolism geneMRPS11PSME20.8313095652.14E-32
THYMCell metabolism geneMRPS11TOMM50.8323332411.54E-32
THYMCell metabolism geneMRPS11HMBS0.8326094721.40E-32
THYMCell metabolism geneMRPS11GALK10.8329442491.26E-32
THYMCell metabolism geneMRPS11GSS0.8331400371.18E-32
THYMCell metabolism geneMRPS11NOP560.8338494219.35E-33
THYMCell metabolism geneMRPS11TBCB0.835266335.85E-33
THYMCell metabolism geneMRPS11IDH3B0.8366458993.69E-33
THYMCell metabolism geneMRPS11PSMB100.8376971222.59E-33
THYMCell metabolism geneMRPS11DPM30.8380686892.28E-33
THYMCell metabolism geneMRPS11EXOSC50.8419774125.96E-34
THYMCell metabolism geneMRPS11GEMIN60.8447972892.21E-34
THYMCell metabolism geneMRPS11PSMA50.8460011491.44E-34
THYMCell metabolism geneMRPS11PSMD130.8467806581.09E-34
THYMCell metabolism geneMRPS11TSTA30.8515927921.86E-35
THYMCell metabolism geneMRPS11DGUOK0.8522350971.46E-35
THYMCell metabolism geneMRPS11SNRPB0.8528068591.18E-35
THYMCell metabolism geneMRPS11PMPCA0.8528400451.17E-35
THYMCell metabolism geneMRPS11LSM30.8559194783.61E-36
THYMCell metabolism geneMRPS11PGLS0.8573642442.06E-36
THYMCell metabolism geneMRPS11POLR2J0.8579499171.64E-36
THYMCell metabolism geneMRPS11PSMA40.8595432898.77E-37
THYMCell metabolism geneMRPS11PSMA70.8609626374.98E-37
THYMCell metabolism geneMRPS11SUCLG10.861046154.82E-37
THYMCell metabolism geneMRPS11ATIC0.861211514.51E-37
THYMCell metabolism geneMRPS11POLD20.8621429023.10E-37
THYMCell metabolism geneMRPS11ATP5G10.8637883781.59E-37
THYMCell metabolism geneMRPS11SEC61G0.8655630917.63E-38
THYMCell metabolism geneMRPS11PAFAH1B30.8656894947.24E-38
THYMCell metabolism geneMRPS11CYC10.8660922166.12E-38
THYMCell metabolism geneMRPS11HMOX20.86691314.34E-38
THYMCell metabolism geneMRPS11MTX10.8669515874.27E-38
THYMCell metabolism geneMRPS11PSMB60.8683310652.39E-38
THYMCell metabolism geneMRPS11POLR2H0.8705163579.36E-39
THYMCell metabolism geneMRPS11PSMC10.8710047937.57E-39
THYMCell metabolism geneMRPS11TOMM220.8716748715.66E-39
THYMCell metabolism geneMRPS11TIMM8B0.8729138263.28E-39
THYMCell metabolism geneMRPS11EXOSC40.8752986591.13E-39
THYMCell metabolism geneMRPS11POLR2I0.8754332211.07E-39
THYMCell metabolism geneMRPS11PSMB20.8761276997.80E-40
THYMCell metabolism geneMRPS11PGP0.8768794555.54E-40
THYMCell metabolism geneMRPS11PHKG20.8774816274.20E-40
THYMCell metabolism geneMRPS11MED270.8782579252.94E-40
THYMCell metabolism geneMRPS11PSMC30.8791411261.95E-40
THYMCell metabolism geneMRPS11SNRPE0.8792050141.90E-40
THYMCell metabolism geneMRPS11PSMD80.881240667.28E-41
THYMCell metabolism geneMRPS11DTYMK0.8831083662.98E-41
THYMCell metabolism geneMRPS11NANS0.8928114262.21E-43
THYMCell metabolism geneMRPS11GEMIN70.8938826281.25E-43
THYMCell metabolism geneMRPS11PSMB40.8942609321.02E-43
THYMCell metabolism geneMRPS11TIMM130.8942878411.01E-43
THYMCell metabolism geneMRPS11ACOT80.8951277576.41E-44
THYMCell metabolism geneMRPS11LSM40.8959760454.04E-44
THYMCell metabolism geneMRPS11APRT0.8980124591.31E-44
THYMCell metabolism geneMRPS11TIMM500.8987034188.91E-45
THYMCell metabolism geneMRPS11EBP0.8992591656.52E-45
THYMCell metabolism geneMRPS11WBSCR220.8992664366.49E-45
THYMCell metabolism geneMRPS11HSD17B100.9008781782.59E-45
THYMCell metabolism geneMRPS11SNRPD20.9013949351.92E-45
THYMCell metabolism geneMRPS11PSMB70.9017000671.61E-45
THYMCell metabolism geneMRPS11PSMB30.9026006019.54E-46
THYMCell metabolism geneMRPS11GUK10.9046493982.83E-46
THYMCell metabolism geneMRPS11TOMM400.917811435.69E-50
THYMCell metabolism geneMRPS11TIMM17B0.9228850841.45E-51
THYMCell metabolism geneMRPS11PSMD40.9266942027.78E-53
THYMCGCMRPS11RBM100.8131995195.48E-30
THYMCGCMRPS11ATIC0.861211514.51E-37
THYMCGCMRPS11TFPT0.8626953112.48E-37
THYMCGCMRPS11COX6C0.8784163172.73E-40
THYMCGCMRPS11SDHAF20.8887860291.79E-42
THYMEpifactorMRPS11SUV39H10.8023498731.15E-28
THYMEpifactorMRPS11PRMT10.8130528065.72E-30
THYMEpifactorMRPS11INO80E0.81726991.66E-30
THYMEpifactorMRPS11C17orf490.8195386148.45E-31
THYMEpifactorMRPS11HMG20B0.8224070383.54E-31
THYMEpifactorMRPS11FBL0.8230194942.93E-31
THYMEpifactorMRPS11VPS720.8233347292.66E-31
THYMEpifactorMRPS11PPM1G0.841502687.02E-34
THYMEpifactorMRPS11SIRT60.8419612555.99E-34
THYMEpifactorMRPS11EXOSC50.8419774125.96E-34
THYMEpifactorMRPS11ZGPAT0.8498285593.58E-35
THYMEpifactorMRPS11PPP4C0.8529087221.14E-35
THYMEpifactorMRPS11PAF10.8533048599.79E-36
THYMEpifactorMRPS11RRP80.8556424454.02E-36
THYMEpifactorMRPS11RUVBL20.8592778729.74E-37
THYMEpifactorMRPS11TAF100.8598083967.89E-37
THYMEpifactorMRPS11LAS1L0.8626943262.48E-37
THYMEpifactorMRPS11TFPT0.8626953112.48E-37
THYMEpifactorMRPS11ZNHIT10.8666866964.78E-38
THYMEpifactorMRPS11EXOSC40.8752986591.13E-39
THYMEpifactorMRPS11BRMS10.8973742631.87E-44
THYMEpifactorMRPS11PRPF310.899098417.14E-45
THYMEpifactorMRPS11CDK50.917273968.28E-50
THYMIUPHARMRPS11SUV39H10.8023498731.15E-28
THYMIUPHARMRPS11SLC27A40.8053865454.99E-29
THYMIUPHARMRPS11MVD0.8069110873.27E-29
THYMIUPHARMRPS11ATG4B0.8089244941.86E-29
THYMIUPHARMRPS11PRMT10.8130528065.72E-30
THYMIUPHARMRPS11SLC27A50.8221403143.84E-31
THYMIUPHARMRPS11UCHL30.8285612275.18E-32
THYMIUPHARMRPS11ECE20.8296512893.66E-32
THYMIUPHARMRPS11STK160.8365937873.75E-33
THYMIUPHARMRPS11SLC39A30.8389656951.68E-33
THYMIUPHARMRPS11SIRT60.8419612555.99E-34
THYMIUPHARMRPS11PPIA0.861537323.96E-37
THYMIUPHARMRPS11HMOX20.86691314.34E-38
THYMIUPHARMRPS11PSMB60.8683310652.39E-38
THYMIUPHARMRPS11PSMB20.8761276997.80E-40
THYMIUPHARMRPS11PHKG20.8774816274.20E-40
THYMIUPHARMRPS11CDK50.917273968.28E-50
THYMKinaseMRPS11FASTK0.8268519788.91E-32
THYMKinaseMRPS11STK160.8365937873.75E-33
THYMKinaseMRPS11ADCK40.8512894642.08E-35
THYMKinaseMRPS11PHKG20.8774816274.20E-40
THYMKinaseMRPS11CDK50.917273968.28E-50
THYMTFMRPS11GTF3A0.800038892.14E-28
THYMTFMRPS11DNTTIP10.8002894732.00E-28
THYMTFMRPS11IRF30.8040092787.29E-29
THYMTFMRPS11RBCK10.8041629956.99E-29
THYMTFMRPS11GLI40.8079965652.41E-29
THYMTFMRPS11ZNF5810.8135902764.89E-30
THYMTFMRPS11THYN10.8154785172.82E-30
THYMTFMRPS11SNAPC20.8164516252.12E-30
THYMTFMRPS11THAP80.8190427259.81E-31
THYMTFMRPS11ZNF6720.8201987756.93E-31
THYMTFMRPS11HMG20B0.8224070383.54E-31
THYMTFMRPS11MYPOP0.8305400912.75E-32
THYMTFMRPS11PREB0.8311505742.26E-32
THYMTFMRPS11ZNF6680.8333147071.11E-32
THYMTFMRPS11PIN10.8394132141.44E-33
THYMTFMRPS11DRAP10.8431190764.00E-34
THYMTFMRPS11ZNF7870.8441145642.81E-34
THYMTFMRPS11ZGPAT0.8498285593.58E-35
THYMTFMRPS11ZNF6880.8720756924.75E-39
THYMTFMRPS11USF10.87767213.85E-40
THYMTSGMRPS11PFN10.8028426171.00E-28
THYMTSGMRPS11IRF30.8040092787.29E-29
THYMTSGMRPS11MAD1L10.8115053328.93E-30
THYMTSGMRPS11NPRL20.817660891.48E-30
THYMTSGMRPS11ST200.8221295873.85E-31
THYMTSGMRPS11NME10.829299314.10E-32
THYMTSGMRPS11ZNF6680.8333147071.11E-32
THYMTSGMRPS11GADD45GIP10.8336782339.89E-33
THYMTSGMRPS11STUB10.8376905442.59E-33
THYMTSGMRPS11PIN10.8394132141.44E-33
THYMTSGMRPS11PARK70.8410628318.18E-34
THYMTSGMRPS11PINX10.8418593216.21E-34
THYMTSGMRPS11SIRT60.8419612555.99E-34
THYMTSGMRPS11TSSC40.8516333091.83E-35
THYMTSGMRPS11BRMS10.8973742631.87E-44
UCSCell metabolism geneMRPS11SNRPD10.8000168692.15E-28
UCSCell metabolism geneMRPS11TXN0.8020380521.25E-28
UCSCell metabolism geneMRPS11GMPPA0.8048920855.72E-29
UCSCell metabolism geneMRPS11GSTZ10.8051456235.33E-29
UCSCell metabolism geneMRPS11FPGS0.8054833564.86E-29
UCSCell metabolism geneMRPS11PCYT20.8065936133.57E-29
UCSCell metabolism geneMRPS11TAZ0.8066372993.53E-29
UCSCell metabolism geneMRPS11MVD0.8069110873.27E-29
UCSCell metabolism geneMRPS11PSME10.8109181751.06E-29
UCSCell metabolism geneMRPS11DHRS40.8129547325.88E-30
UCSCell metabolism geneMRPS11SRM0.8130929915.65E-30
UCSCell metabolism geneMRPS11PSMC50.8168124211.91E-30
UCSCell metabolism geneMRPS11DPM20.8173966731.60E-30
UCSCell metabolism geneMRPS11GCDH0.8175015471.55E-30
UCSCell metabolism geneMRPS11LSM50.8175630411.53E-30
UCSCell metabolism geneMRPS11POLE40.8209836295.46E-31
UCSCell metabolism geneMRPS11SLC27A50.8221403143.84E-31
UCSCell metabolism geneMRPS11AK20.8223916033.56E-31
UCSCell metabolism geneMRPS11DHRS4L20.8227168153.22E-31
UCSCell metabolism geneMRPS11PPCDC0.8245835581.81E-31
UCSCell metabolism geneMRPS11CCT70.8253017251.45E-31
UCSCell metabolism geneMRPS11ITPA0.8255413971.34E-31
UCSCell metabolism geneMRPS11PSMA60.8257762351.25E-31
UCSCell metabolism geneMRPS11TPI10.8258787581.21E-31
UCSCell metabolism geneMRPS11PSMC40.8275168047.22E-32
UCSCell metabolism geneMRPS11UROS0.8290918224.38E-32
UCSCell metabolism geneMRPS11NME10.829299314.10E-32
UCSCell metabolism geneMRPS11POLR3K0.8307065642.61E-32
UCSCell metabolism geneMRPS11TIMM100.8309387842.42E-32
UCSCell metabolism geneMRPS11PREB0.8311505742.26E-32
UCSCell metabolism geneMRPS11PSME20.8313095652.14E-32
UCSCell metabolism geneMRPS11TOMM50.8323332411.54E-32
UCSCell metabolism geneMRPS11HMBS0.8326094721.40E-32
UCSCell metabolism geneMRPS11GALK10.8329442491.26E-32
UCSCell metabolism geneMRPS11GSS0.8331400371.18E-32
UCSCell metabolism geneMRPS11NOP560.8338494219.35E-33
UCSCell metabolism geneMRPS11TBCB0.835266335.85E-33
UCSCell metabolism geneMRPS11IDH3B0.8366458993.69E-33
UCSCell metabolism geneMRPS11PSMB100.8376971222.59E-33
UCSCell metabolism geneMRPS11DPM30.8380686892.28E-33
UCSCell metabolism geneMRPS11EXOSC50.8419774125.96E-34
UCSCell metabolism geneMRPS11GEMIN60.8447972892.21E-34
UCSCell metabolism geneMRPS11PSMA50.8460011491.44E-34
UCSCell metabolism geneMRPS11PSMD130.8467806581.09E-34
UCSCell metabolism geneMRPS11TSTA30.8515927921.86E-35
UCSCell metabolism geneMRPS11DGUOK0.8522350971.46E-35
UCSCell metabolism geneMRPS11SNRPB0.8528068591.18E-35
UCSCell metabolism geneMRPS11PMPCA0.8528400451.17E-35
UCSCell metabolism geneMRPS11LSM30.8559194783.61E-36
UCSCell metabolism geneMRPS11PGLS0.8573642442.06E-36
UCSCell metabolism geneMRPS11POLR2J0.8579499171.64E-36
UCSCell metabolism geneMRPS11PSMA40.8595432898.77E-37
UCSCell metabolism geneMRPS11PSMA70.8609626374.98E-37
UCSCell metabolism geneMRPS11SUCLG10.861046154.82E-37
UCSCell metabolism geneMRPS11ATIC0.861211514.51E-37
UCSCell metabolism geneMRPS11POLD20.8621429023.10E-37
UCSCell metabolism geneMRPS11ATP5G10.8637883781.59E-37
UCSCell metabolism geneMRPS11SEC61G0.8655630917.63E-38
UCSCell metabolism geneMRPS11PAFAH1B30.8656894947.24E-38
UCSCell metabolism geneMRPS11CYC10.8660922166.12E-38
UCSCell metabolism geneMRPS11HMOX20.86691314.34E-38
UCSCell metabolism geneMRPS11MTX10.8669515874.27E-38
UCSCell metabolism geneMRPS11PSMB60.8683310652.39E-38
UCSCell metabolism geneMRPS11POLR2H0.8705163579.36E-39
UCSCell metabolism geneMRPS11PSMC10.8710047937.57E-39
UCSCell metabolism geneMRPS11TOMM220.8716748715.66E-39
UCSCell metabolism geneMRPS11TIMM8B0.8729138263.28E-39
UCSCell metabolism geneMRPS11EXOSC40.8752986591.13E-39
UCSCell metabolism geneMRPS11POLR2I0.8754332211.07E-39
UCSCell metabolism geneMRPS11PSMB20.8761276997.80E-40
UCSCell metabolism geneMRPS11PGP0.8768794555.54E-40
UCSCell metabolism geneMRPS11PHKG20.8774816274.20E-40
UCSCell metabolism geneMRPS11MED270.8782579252.94E-40
UCSCell metabolism geneMRPS11PSMC30.8791411261.95E-40
UCSCell metabolism geneMRPS11SNRPE0.8792050141.90E-40
UCSCell metabolism geneMRPS11PSMD80.881240667.28E-41
UCSCell metabolism geneMRPS11DTYMK0.8831083662.98E-41
UCSCell metabolism geneMRPS11NANS0.8928114262.21E-43
UCSCell metabolism geneMRPS11GEMIN70.8938826281.25E-43
UCSCell metabolism geneMRPS11PSMB40.8942609321.02E-43
UCSCell metabolism geneMRPS11TIMM130.8942878411.01E-43
UCSCell metabolism geneMRPS11ACOT80.8951277576.41E-44
UCSCell metabolism geneMRPS11LSM40.8959760454.04E-44
UCSCell metabolism geneMRPS11APRT0.8980124591.31E-44
UCSCell metabolism geneMRPS11TIMM500.8987034188.91E-45
UCSCell metabolism geneMRPS11EBP0.8992591656.52E-45
UCSCell metabolism geneMRPS11WBSCR220.8992664366.49E-45
UCSCell metabolism geneMRPS11HSD17B100.9008781782.59E-45
UCSCell metabolism geneMRPS11SNRPD20.9013949351.92E-45
UCSCell metabolism geneMRPS11PSMB70.9017000671.61E-45
UCSCell metabolism geneMRPS11PSMB30.9026006019.54E-46
UCSCell metabolism geneMRPS11GUK10.9046493982.83E-46
UCSCell metabolism geneMRPS11TOMM400.917811435.69E-50
UCSCell metabolism geneMRPS11TIMM17B0.9228850841.45E-51
UCSCell metabolism geneMRPS11PSMD40.9266942027.78E-53
UCSCGCMRPS11RBM100.8131995195.48E-30
UCSCGCMRPS11ATIC0.861211514.51E-37
UCSCGCMRPS11TFPT0.8626953112.48E-37
UCSCGCMRPS11COX6C0.8784163172.73E-40
UCSCGCMRPS11SDHAF20.8887860291.79E-42
UCSEpifactorMRPS11SUV39H10.8023498731.15E-28
UCSEpifactorMRPS11PRMT10.8130528065.72E-30
UCSEpifactorMRPS11INO80E0.81726991.66E-30
UCSEpifactorMRPS11C17orf490.8195386148.45E-31
UCSEpifactorMRPS11HMG20B0.8224070383.54E-31
UCSEpifactorMRPS11FBL0.8230194942.93E-31
UCSEpifactorMRPS11VPS720.8233347292.66E-31
UCSEpifactorMRPS11PPM1G0.841502687.02E-34
UCSEpifactorMRPS11SIRT60.8419612555.99E-34
UCSEpifactorMRPS11EXOSC50.8419774125.96E-34
UCSEpifactorMRPS11ZGPAT0.8498285593.58E-35
UCSEpifactorMRPS11PPP4C0.8529087221.14E-35
UCSEpifactorMRPS11PAF10.8533048599.79E-36
UCSEpifactorMRPS11RRP80.8556424454.02E-36
UCSEpifactorMRPS11RUVBL20.8592778729.74E-37
UCSEpifactorMRPS11TAF100.8598083967.89E-37
UCSEpifactorMRPS11LAS1L0.8626943262.48E-37
UCSEpifactorMRPS11TFPT0.8626953112.48E-37
UCSEpifactorMRPS11ZNHIT10.8666866964.78E-38
UCSEpifactorMRPS11EXOSC40.8752986591.13E-39
UCSEpifactorMRPS11BRMS10.8973742631.87E-44
UCSEpifactorMRPS11PRPF310.899098417.14E-45
UCSEpifactorMRPS11CDK50.917273968.28E-50
UCSIUPHARMRPS11SUV39H10.8023498731.15E-28
UCSIUPHARMRPS11SLC27A40.8053865454.99E-29
UCSIUPHARMRPS11MVD0.8069110873.27E-29
UCSIUPHARMRPS11ATG4B0.8089244941.86E-29
UCSIUPHARMRPS11PRMT10.8130528065.72E-30
UCSIUPHARMRPS11SLC27A50.8221403143.84E-31
UCSIUPHARMRPS11UCHL30.8285612275.18E-32
UCSIUPHARMRPS11ECE20.8296512893.66E-32
UCSIUPHARMRPS11STK160.8365937873.75E-33
UCSIUPHARMRPS11SLC39A30.8389656951.68E-33
UCSIUPHARMRPS11SIRT60.8419612555.99E-34
UCSIUPHARMRPS11PPIA0.861537323.96E-37
UCSIUPHARMRPS11HMOX20.86691314.34E-38
UCSIUPHARMRPS11PSMB60.8683310652.39E-38
UCSIUPHARMRPS11PSMB20.8761276997.80E-40
UCSIUPHARMRPS11PHKG20.8774816274.20E-40
UCSIUPHARMRPS11CDK50.917273968.28E-50
UCSKinaseMRPS11FASTK0.8268519788.91E-32
UCSKinaseMRPS11STK160.8365937873.75E-33
UCSKinaseMRPS11ADCK40.8512894642.08E-35
UCSKinaseMRPS11PHKG20.8774816274.20E-40
UCSKinaseMRPS11CDK50.917273968.28E-50
UCSTFMRPS11GTF3A0.800038892.14E-28
UCSTFMRPS11DNTTIP10.8002894732.00E-28
UCSTFMRPS11IRF30.8040092787.29E-29
UCSTFMRPS11RBCK10.8041629956.99E-29
UCSTFMRPS11GLI40.8079965652.41E-29
UCSTFMRPS11ZNF5810.8135902764.89E-30
UCSTFMRPS11THYN10.8154785172.82E-30
UCSTFMRPS11SNAPC20.8164516252.12E-30
UCSTFMRPS11THAP80.8190427259.81E-31
UCSTFMRPS11ZNF6720.8201987756.93E-31
UCSTFMRPS11HMG20B0.8224070383.54E-31
UCSTFMRPS11MYPOP0.8305400912.75E-32
UCSTFMRPS11PREB0.8311505742.26E-32
UCSTFMRPS11ZNF6680.8333147071.11E-32
UCSTFMRPS11PIN10.8394132141.44E-33
UCSTFMRPS11DRAP10.8431190764.00E-34
UCSTFMRPS11ZNF7870.8441145642.81E-34
UCSTFMRPS11ZGPAT0.8498285593.58E-35
UCSTFMRPS11ZNF6880.8720756924.75E-39
UCSTFMRPS11USF10.87767213.85E-40
UCSTSGMRPS11PFN10.8028426171.00E-28
UCSTSGMRPS11IRF30.8040092787.29E-29
UCSTSGMRPS11MAD1L10.8115053328.93E-30
UCSTSGMRPS11NPRL20.817660891.48E-30
UCSTSGMRPS11ST200.8221295873.85E-31
UCSTSGMRPS11NME10.829299314.10E-32
UCSTSGMRPS11ZNF6680.8333147071.11E-32
UCSTSGMRPS11GADD45GIP10.8336782339.89E-33
UCSTSGMRPS11STUB10.8376905442.59E-33
UCSTSGMRPS11PIN10.8394132141.44E-33
UCSTSGMRPS11PARK70.8410628318.18E-34
UCSTSGMRPS11PINX10.8418593216.21E-34
UCSTSGMRPS11SIRT60.8419612555.99E-34
UCSTSGMRPS11TSSC40.8516333091.83E-35
UCSTSGMRPS11BRMS10.8973742631.87E-44


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
COADMRPS11MRPS122.115663331148240.000125885009765625
KICHMRPS11MRPS51.251082878384370.000249803066253662
LIHCMRPS11MRPS71.270293954772080.00182077236082954
STADMRPS11MRPS16-1.642080849874310.00239070039242506
LIHCMRPS11MRPS18C-1.253360420466980.00251545393492315
COADMRPS11MRPS18C-3.485058302403650.00322914123535157
ESCAMRPS11MRPS12-1.862485498145060.0048828125
PRADMRPS11MRPS91.043791155532690.00496210155254694
HNSCMRPS11MRPS16-2.015646218218030.00518989327406416
KICHMRPS11MRPS21.265439895550150.0114533305168152
ESCAMRPS11MRPS5-2.154401187478540.0185546875
ESCAMRPS11MRPS2-3.205567880846750.0244140625
HNSCMRPS11MRPS121.336771399271360.0248336488591576
LUADMRPS11MRPS12-5.33991856837191.00823612619819e-08
THCAMRPS11MRPS101.334136917649911.55171507174296e-05
BRCAMRPS11MRPS12-1.595372352225971.66215672512325e-20
LUADMRPS11MRPS5-2.208819458859271.77904381378076e-06
LUSCMRPS11MRPS9-3.606376410316611.82498668910368e-07
LUSCMRPS11MRPS2-2.709308464885081.92864354932136e-09
KICHMRPS11MRPS351.142330826733411.96695327758789e-06
LUADMRPS11MRPS9-1.328944548849011.98978698949574e-05
LIHCMRPS11MRPS122.671894308103172.56696988045444e-05
KICHMRPS11MRPS121.489410809264053.19480895996094e-05
KIRCMRPS11MRPS35-2.334524055638593.58581186640388e-10
LUADMRPS11MRPS14-3.026349140226474.24616078981701e-06
LIHCMRPS11MRPS2-1.147710553588284.2584580238307e-05
LUSCMRPS11MRPS5-7.659563899623194.27210217182982e-06
LUSCMRPS11MRPS14-3.867261633642216.1453992201761e-05
BRCAMRPS11MRPS7-2.127874602704349.33194208595055e-10


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with MRPS11
ICT1, CUL3, COPS5, MRPS14, SAMM50, RPS23, RPL23, RPL9, RPS26, SRPK1, CEP57, CEP76, NOL12, TRA2A, RPL6, MRPS2, ZC3H3, RPS8, TRMT10B, ZNF707, MRPS31, MRPS5, MRPS9, CUL4A, PTCD3, MTIF2, DCAF5, MRPS22, WDTC1, DDA1, PCMTD1, PCMTD2, MRPS18C, RPS2, DAP3, Fbxo21, CDC14B, DUSP11, NOA1, TNIK, MRPS15, DRAP1, MRPS34, STRBP, SUPV3L1, MRPS27, MRPS21, MRPS35, RBM12, MRPS33, MLLT4, EDC4, AURKAIP1, MRPS7, TPD52, FNTB, ZC3H4, NAA16, MRPS18B, TCEA1, RCBTB2, MRPS26, NAA15, LETM1, RPRD1A, ZBTB48, PSMF1, MRPS25, DBT, MRPS24, DDX55, ETF1, CYB5R3, MRPS28, E4F1, HNRNPR, ZFC3H1, CUL4B, ZNF331, MCAT, MRPS23, ZNF324B, ZNF169, PUS1, MRPS10, SRP54, DLST, TRIM25, ACTL6A, ATP1A1, FAM50A, GINS4, KIF14, MED14, MRPL57, MRPL10, MRPL22, MRPL43, GATB, PGD, PGK1, PSMB6, PSMC6, TAF2, WDR61, ESR2, HEXIM1, MEPCE, LARP7, RECQL4, MRM1, HSPD1, PDK1, TRMT61B, RC3H2, NR2C2, KRAS, TCF7L2, SNRNP70, NAA10, HTRA2, PARL, nsp13, nsp3, nsp9, ORF10, ORF14, ORF8, IMMP2L, ACAD9, AUH, C12orf65, C1QBP, C21orf33, C6orf203, FASTKD2, FASTKD3, FASTKD5, GFM1, GRSF1, HINT2, LRPPRC, MDH2, METTL15, METTL17, MRPL11, MRRF, MTERF3, MTFMT, MTG2, MTIF3, MTRF1, MTRF1L, SLIRP, SSBP1, TACO1, TBRG4, TFAM, TRUB2, TSFM, TUFM, EXD2, CLPP, INS, MAFB, HSCB, CCNT1, CIAO1, NSRP1, LRPAP1, CPSF2, C1orf35, AARS2, COX8A, CS, EBAG9, PDHA1, MAP4K3, ZBTB2, IGF2BP3, SRSF5, HNRNPU, SRSF3, PRR3, YBX1, H1FNT, RPL26, LIN28B, ZNF460, YBX2, CRYBB1, RBMS2, ZKSCAN8, RPL17, MRPS17, GLI4, SURF6, RBM47, HIST1H2AM, SRSF7, RPL35, RPL4, NEIL1, SRP14, MRPS16, APOBEC3D, UBR2, ABT1, RPL36AL, MRPL2, NAAA, ERAL1, MRPS6, RPLP0, RPL10, SRSF1, RPL19, KRT31, PRPF6, NRP1, CLEC4E, M, NBR1, SQSTM1, KLF12, KLF4,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
MRPS11BRCAchr158902021989020219GASplice_Sitee5-13
MRPS11BRCAchr158902027089020270GASilentp.L1543
MRPS11UCSchr158902119589021195GASilentp.K190K3
MRPS11PAADchr158901841189018411CTMissense_Mutationp.R118W3
MRPS11UCECchr158901847089018470GASilentp.A1372
MRPS11HNSCchr158901592189015921GASilentp.E82E2
MRPS11UCECchr158902025089020250CTNonsense_Mutationp.R148*2
MRPS11UCECchr158902116889021168CASilentp.I1812
MRPS11SKCMchr158901587489015874CTMissense_Mutationp.P67S2
MRPS11COADchr158902111589021115GAMissense_Mutationp.G164R2
MRPS11LIHCchr158901096389010963A-Frame_Shift_Delp.R5fs2
MRPS11SKCMchr158901586289015862TAMissense_Mutationp.Y63N2
MRPS11STADchr158902023789020237CTSilentp.G143G2
MRPS11ESCAchr158901844689018446GASilent2
MRPS11PAADchr158901841189018411CTMissense_Mutation2
MRPS11ESCAchr158901844689018446GASilentp.Q129Q2
MRPS11UCECchr158901836489018364CAMissense_Mutationp.A102D2
MRPS11HNSCchr158901592189015921GASilent1
MRPS11SARCchr158901124089011240GTMissense_Mutation1
MRPS11SARCchr158902027389020273GTSilent1
MRPS11KIRPchr158901114189011141GTMissense_Mutation1
MRPS11SARCchr158901080789010807GTMissense_Mutation1
MRPS11COADchr158901585889015858CTSilentp.S61S1
MRPS11LIHCchr158902112689021126G-Frame_Shift_Delp.M167fs1
MRPS11UCSchr158902119589021195GASilent1
MRPS11COADchr158901843889018438GAMissense_Mutationp.A127T1
MRPS11LIHCchr158901591389015913T-Frame_Shift_Delp.F80fs1
MRPS11ESCAchr158901844689018446GAMissense_Mutationp.D109N1
MRPS11LIHCchr158902114589021145TCMissense_Mutation1
MRPS11STADchr158902027789020277GTNonsense_Mutationp.G157*1
MRPS11ESCAchr158901846989018469CAMissense_Mutationp.A137E1
MRPS11LUADchr158901589289015892CGMissense_Mutationp.L73V1
MRPS11STADchr158901097589010975GASilentp.S9S1
MRPS11ESCAchr158901846989018469CAMissense_Mutation1
MRPS11LUADchr158901114089011140ATSplice_Sitep.R23_splice1
MRPS11TGCTchr158901068989010689CTMissense_Mutation1
MRPS11TGCTchr158901097689010976CTMissense_Mutation1

check buttonCopy number variation (CNV) of MRPS11
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across MRPS11
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
24625PRADTCGA-G9-6354DYNC1LI1chr332582528-MRPS11chr1589020219+
24625PRADTCGA-G9-6354-01ADYNC1LI1chr332582529-MRPS11chr1589020220+
91359N/ABD309467MRPS11chr1589021618+CACNB2chr1018493898+
89093N/AAF320777MRPS11chr1589021498+LYSTchr1235961871+


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
HNSCMRPS110.03457132456425870.97
LUADMRPS110.03675387438973930.99
LIHCMRPS110.04494588829857291
SKCMMRPS110.04889950791782091

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRCMRPS110.04594790890777781
LGGMRPS110.001860772367592690.061
CESCMRPS110.02142395150609680.69
THYMMRPS110.02739672658257230.85

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source
C0024623Malignant neoplasm of stomach1CTD_human
C1708349Hereditary Diffuse Gastric Cancer1CTD_human