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	Gene Summary
	Translation studies in PubMed
	Exon Skipping Events
	Expression
	Expression Regulation
	Associated Genes
	Protein 3D Structure
	Protein-Protein Interaction
	Mutations
	Prognostic Analysis
	Gender Association
	Age Association
	Related Drugs
	Related Diseases

Translation Factor: CSDE1 (NCBI Gene ID:7812)

Gene Summary

Gene Summary

Gene Information	Gene Name: CSDE1
	Gene ID: 7812
	Gene Symbol	CSDE1
	Gene ID	7812
	Gene Name	cold shock domain containing E1
	Synonyms	D1S155E\|UNR
	Cytomap	1p13.2
	Type of Gene	protein-coding
	Description	cold shock domain-containing protein E1N-ras upstream gene proteinNRAS-relatedcold shock domain containing E1, RNA bindingupstream of NRAS
	Modification date	20200313
	UniProtAcc	O75534

Child GO biological process term(s) under GO:0006412

GO ID	GO term
GO:0017148	Negative regulation of translation
GO:0006417	Regulation of translation
GO:0045727	Positive regulation of translation
GO:0002181	Cytoplasmic translation
GO:0006413	Translational initiation
GO:0006412	Translation

Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Inferred gene age of translation factor.

Gene	Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
CSDE1	(733 - 1119.25]

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Translation Studies in PubMed

We searched PubMed using 'CSDE1[title] AND translation [title] AND human.'

Gene	Title	PMID
CSDE1	.	.

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Exon Skipping Events

Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.

Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ENST	Exon skip start (DNA)	Exon Skip end (DNA)	ORF
ENST00000358528	115261233	115261366	Frame-shift
ENST00000534699	115261233	115261366	Frame-shift
ENST00000358528	115262199	115262363	Frame-shift
ENST00000534699	115262199	115262363	Frame-shift
ENST00000358528	115266503	115266623	In-frame
ENST00000534699	115266503	115266623	In-frame
ENST00000358528	115267841	115267954	Frame-shift
ENST00000534699	115267841	115267954	Frame-shift
ENST00000358528	115268831	115269007	Frame-shift
ENST00000534699	115268831	115269007	Frame-shift
ENST00000358528	115269603	115269711	In-frame
ENST00000534699	115269603	115269711	In-frame
ENST00000358528	115272878	115273043	In-frame
ENST00000534699	115272878	115273043	In-frame
ENST00000358528	115273128	115273269	In-frame
ENST00000534699	115273128	115273269	In-frame
ENST00000358528	115275224	115275437	In-frame
ENST00000534699	115275224	115275437	In-frame
ENST00000358528	115276609	115276738	In-frame
ENST00000534699	115276609	115276738	In-frame
ENST00000358528	115280091	115280184	In-frame
ENST00000534699	115280091	115280184	In-frame
ENST00000358528	115282312	115282511	In-frame
ENST00000534699	115282312	115282511	In-frame
ENST00000358528	115292441	115292828	3UTR-3UTR

Exon skipping position in the amino acid sequence.

ENST	Exon skip start (DNA)	Exon Skip end (DNA)	Len(transcript seq)	Exon skip start (mRNA)	Exon Skip end (mRNA)	Len(amino acid seq)	Exon skip start (AA)	Exon Skip end (AA)
ENST00000534699	115266503	115266623	2684	1812	1931	798	584	624
ENST00000358528	115266503	115266623	4093	2181	2300	798	584	624
ENST00000534699	115269603	115269711	2684	1415	1522	798	452	488
ENST00000358528	115269603	115269711	4093	1784	1891	798	452	488
ENST00000534699	115272878	115273043	2684	1250	1414	798	397	452
ENST00000358528	115272878	115273043	4093	1619	1783	798	397	452
ENST00000534699	115273128	115273269	2684	1109	1249	798	350	397
ENST00000358528	115273128	115273269	4093	1478	1618	798	350	397
ENST00000534699	115275224	115275437	2684	896	1108	798	279	350
ENST00000358528	115275224	115275437	4093	1265	1477	798	279	350
ENST00000534699	115276609	115276738	2684	641	769	798	194	237
ENST00000358528	115276609	115276738	4093	1010	1138	798	194	237
ENST00000534699	115280091	115280184	2684	368	460	798	103	134
ENST00000358528	115280091	115280184	4093	737	829	798	103	134
ENST00000534699	115282312	115282511	2684	59	257	798	0	66
ENST00000358528	115282312	115282511	4093	428	626	798	0	66

Potentially (partially) lost protein functional features of UniProt.

UniProtAcc

Exon skip start (AA)

Exon Skip end (AA)

Function feature start (AA)

Function feature end (AA)

Functional feature type

Functional feature desc.

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Expression

Gene expression level across TCGA pancancer

Gene expression level across GTEx pantissue

Expression level of gene isoforms across TCGA pancancer

Expression level of gene isoforms across GTEx pantissue

Cancer(tissue) type-specific expression level of Translation factor using z-score distriution

Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)

Cancer type	Translation factor	FC	adj.pval
LUSC	CSDE1	-1.33200117661228	0.025379830388344
HNSC	CSDE1	-1.92574762956205	1.42088565553422e-05
THCA	CSDE1	-1.00581945790421	1.55171507174296e-05
BRCA	CSDE1	-1.23575001565702	1.5698167165288e-21
LUAD	CSDE1	-1.92573954016457	6.46801743847803e-05

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Expression Regulation

Translation factor expression regulation through miRNA binding

Cancer type	Gene	miRNA	TargetScan binding score (Context++ score percentile)	Coefficient	Pvalue
CHOL	CSDE1	hsa-miR-132-3p	98	0.328601073994925	0.0275317484702062
LUAD	CSDE1	hsa-miR-212-3p	98	0.380910384068279	0.000813106118036065

Translation factor expression regulation through methylation in the promoter of Translation factor

Cancer type

Gene

methyl group b

methyl group a

DEG pval

avg methyl in b

avg methyl in a

avg exp in b

avg exp in a

Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)

Cancer type

Gene

methyl group b

methyl group a

DEG pval

avg methyl in b

avg methyl in a

avg exp in b

avg exp in a

Translation factor expression regulation through copy number variation of Translation factor

Cancer type	Gene	Coefficient	Pvalue
ESCA	CSDE1	0.062004114	0.021487814
PAAD	CSDE1	-0.224527335	0.048075257

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Associated Genes

Strongly correlated genes belong to cellular important gene groups with CSDE1 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)

Cancer type	Gene group	Translation factor	Correlated gene	Coefficient	Pvalue
DLBC	Cell metabolism gene	CSDE1	AHCYL1	0.84430435	4.73E-14
DLBC	CGC	CSDE1	NRAS	0.804074185	5.89E-12
DLBC	CGC	CSDE1	TRIM33	0.820018999	1.00E-12
DLBC	Epifactor	CSDE1	TRIM33	0.820018999	1.00E-12
DLBC	IUPHAR	CSDE1	SLC10A7	0.802978954	6.61E-12
DLBC	IUPHAR	CSDE1	NRAS	0.804074185	5.89E-12
DLBC	IUPHAR	CSDE1	TRIM33	0.820018999	1.00E-12
DLBC	Kinase	CSDE1	TRIM33	0.820018999	1.00E-12
DLBC	TF	CSDE1	ZNF426	0.802740578	6.78E-12
DLBC	TSG	CSDE1	AHCYL1	0.84430435	4.73E-14
KICH	Cell metabolism gene	CSDE1	UPF2	0.816489064	6.03E-23
KICH	Cell metabolism gene	CSDE1	BPNT1	0.826512065	6.26E-24
KICH	Cell metabolism gene	CSDE1	SSR1	0.830597916	2.38E-24
KICH	Cell metabolism gene	CSDE1	PIGK	0.849532805	1.89E-26
KICH	Cell metabolism gene	CSDE1	FPGT	0.850476033	1.46E-26
KICH	CGC	CSDE1	SPOP	0.803545366	9.25E-22
KICH	CGC	CSDE1	PPM1D	0.818446705	3.92E-23
KICH	CGC	CSDE1	SF3B1	0.863840735	3.06E-28
KICH	CGC	CSDE1	CDC73	0.911033051	5.28E-36
KICH	Epifactor	CSDE1	SPOP	0.803545366	9.25E-22
KICH	Epifactor	CSDE1	HAT1	0.806891407	4.66E-22
KICH	Epifactor	CSDE1	KDM1B	0.80882627	3.11E-22
KICH	Epifactor	CSDE1	RNF2	0.812816285	1.34E-22
KICH	Epifactor	CSDE1	PHIP	0.813511091	1.15E-22
KICH	Epifactor	CSDE1	RBBP4	0.81364675	1.12E-22
KICH	Epifactor	CSDE1	HDAC2	0.826883974	5.74E-24
KICH	Epifactor	CSDE1	WAC	0.832709431	1.43E-24
KICH	Epifactor	CSDE1	UCHL5	0.844701469	6.89E-26
KICH	Epifactor	CSDE1	SMEK2	0.847368259	3.39E-26
KICH	Epifactor	CSDE1	SF3B1	0.863840735	3.06E-28
KICH	Epifactor	CSDE1	CDC73	0.911033051	5.28E-36
KICH	IUPHAR	CSDE1	PRPF4B	0.803157482	1.00E-21
KICH	IUPHAR	CSDE1	HAT1	0.806891407	4.66E-22
KICH	IUPHAR	CSDE1	PKD2	0.807034409	4.52E-22
KICH	IUPHAR	CSDE1	KDM1B	0.80882627	3.11E-22
KICH	IUPHAR	CSDE1	XPR1	0.812967799	1.29E-22
KICH	IUPHAR	CSDE1	PHIP	0.813511091	1.15E-22
KICH	IUPHAR	CSDE1	LEPR	0.81666084	5.81E-23
KICH	IUPHAR	CSDE1	PPM1D	0.818446705	3.92E-23
KICH	IUPHAR	CSDE1	HDAC2	0.826883974	5.74E-24
KICH	Kinase	CSDE1	PRPF4B	0.803157482	1.00E-21
KICH	TF	CSDE1	ATF6	0.835723567	6.83E-25
KICH	TF	CSDE1	RFX3	0.861107007	6.97E-28
KICH	TSG	CSDE1	HACE1	0.801145607	1.50E-21
KICH	TSG	CSDE1	SPOP	0.803545366	9.25E-22
KICH	TSG	CSDE1	RASSF8	0.805304491	6.46E-22
KICH	TSG	CSDE1	ABI2	0.80534564	6.41E-22
KICH	TSG	CSDE1	SH3GLB1	0.808389642	3.41E-22
KICH	TSG	CSDE1	XRCC5	0.826499109	6.27E-24
KICH	TSG	CSDE1	IFT88	0.845778088	5.18E-26
KICH	TSG	CSDE1	CDC73	0.911033051	5.28E-36
LGG	Cell metabolism gene	CSDE1	CMPK1	0.824915898	6.44E-133
LGG	CGC	CSDE1	THRAP3	0.866649668	1.45E-161
LGG	Epifactor	CSDE1	HP1BP3	0.808128942	1.80E-123
LGG	Epifactor	CSDE1	ZZZ3	0.816898999	2.76E-128
LGG	Epifactor	CSDE1	DR1	0.852703763	5.16E-151
LGG	IUPHAR	CSDE1	MFN2	0.819429106	1.01E-129
LGG	TF	CSDE1	ZZZ3	0.816898999	2.76E-128
LGG	TF	CSDE1	FOXJ3	0.843355364	1.56E-144
LGG	TF	CSDE1	DR1	0.852703763	5.16E-151
LGG	TF	CSDE1	GPBP1L1	0.863510037	4.35E-159
THCA	Epifactor	CSDE1	WAC	0.800494659	7.83E-129
UVM	Cell metabolism gene	CSDE1	CMPK1	0.808687994	1.17E-19
UVM	Cell metabolism gene	CSDE1	GNG12	0.823531043	6.79E-21

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Protein structure

Protein 3D structure
Visit iCn3D.

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Protein-Protein Interaction

Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))

Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))

* Edge colors based on TCGA cancer types.

* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))

Cancer type	Translation factor	Interacting protein coding gene	FC	adj.pval
COAD	CSDE1	HNRNPU	-3.25414367586013	0.000109195709228516
STAD	CSDE1	DHX9	-1.35515869279777	0.00016188295558095
BLCA	CSDE1	DHX9	2.25372387794619	0.00026702880859375
LUAD	CSDE1	STRAP	-1.69231995261276	0.000371627715045185
KICH	CSDE1	HNRNPU	1.45270865891102	0.000376403331756592
PRAD	CSDE1	HNRNPU	-3.59255010200453	0.00074054058184854
ESCA	CSDE1	HNRNPD	-3.95797649272358	0.0009765625
KIRC	CSDE1	PAIP1	-5.71279064132007	0.00220467399393826
STAD	CSDE1	SYNCRIP	-3.24695040489934	0.00222697434946895
CHOL	CSDE1	PABPC1	-4.56272528815353	0.00390625
COAD	CSDE1	HNRNPD	-6.12601039633597	0.00427913665771485
KICH	CSDE1	HNRNPD	-1.0797746293114	0.00737094879150391
BLCA	CSDE1	PABPC1	1.31485302792746	0.0180816650390625
COAD	CSDE1	MSL2	-1.08642125143466	0.0493468642234803
LUAD	CSDE1	HNRNPD	-3.62564314494355	1.52449212829498e-06
BRCA	CSDE1	PAIP1	1.33783668607252	1.59729685534959e-08
STAD	CSDE1	HNRNPU	-1.26566952320815	2.26888805627823e-05
LIHC	CSDE1	HNRNPU	-1.06098658215773	2.35319665208461e-06
THCA	CSDE1	SYNCRIP	-3.15946429809988	2.46790521879123e-10
LIHC	CSDE1	PABPC1	-1.72076961362188	2.98009622125841e-06
BRCA	CSDE1	YBX1	1.10467241966451	4.8741280959683e-05
BRCA	CSDE1	IGF2BP1	-1.119264636586	6.55843695441879e-13
KICH	CSDE1	YBX1	1.86923259160472	8.16583633422851e-06
PRAD	CSDE1	PABPC1	-2.10200318363476	8.55379952759014e-07

Protein-protein interactors with this translation factor (BIOGRID-3.4.160)

PPI interactors with CSDE1

STT3A, WNK1, AI837181, ELAVL1, SIRT7, PAIP1, CUL3, COPS5, gag, CUL1, ATP6V1B2, PDE3A, SEC24C, SSRP1, XRCC5, XRCC6, GANAB, GMPPB, JUP, PLOD2, SUPT5H, TRMT1, UGP2, VASN, WWOX, HUWE1, FAM9B, HID1, UNK, NUP188, NTRK1, C11orf68, XPO1, PPIA, STRAP, ZNFX1, HEATR5A, PLEKHA3, PABPC4L, SENP3, WWP2, FAM19A3, SAMD4A, HSPA8, TRIM25, G3BP1, BRCA1, HNRNPL, CLEC14A, EFTUD2, RIOK1, ESR2, RECQL4, MYC, FBL, KIAA1429, PHB, ZC3H7A, NR2C2, HDAC2, GBF1, BICD2, P2RY6, SNRNP70, GSK3B, CYLD, RHBDD1, RHBDF2, LMBR1L, EP300, PLEKHA4, N, ORF3a, PRKD1, ERBB2, ESR1, CELF1, AGO1, AGO2, ALG13, KIAA1244, ATXN2, BICC1, CNOT1, CTIF, DDX6, DHX57, EIF4ENIF1, FAM120A, FMR1, FUBP3, G3BP2, HOOK3, IGF2BP2, KIF1B, LARP4, LARP4B, OTUD4, PRRC2A, PRRC2B, PRRC2C, SMG7, TDRD3, TNRC6B, TOP3B, UPF1, USP10, YTHDF2, ZCCHC11, ZNF598, DAZL, DDX3X, FAM120C, FXR1, IGF2BP1, MEX3B, MKRN2, MOV10, PUM1, RBM47, SYNCRIP, YTHDF1, ZC3HAV1, KIF1C, FAM195A, RC3H1, SECISBP2, YTHDF3, ZCCHC3, CAPRIN1, LSM12, KIF14, ARHGEF39, NDN, Rnf183, HULC, MAFB, BRD4, Apc2, RIN3, MKRN3, PARK2, UFL1, DDRGK1, TP53, HNRNPA1, RPS20, SERBP1, ATG7, FZR1, NAA40, HSPA1A, PABPC5, BAG2, BTF3, SNW1, WBP4, Cnn3, NBR1, TAX1BP1,

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Mutations

Clinically associated variants from ClinVar.

Gene	Chr	Position	RefSeq	VarSeq	RefSeeq	VarType	Pathogenic	Disease	VarInfo
CSDE1	chr1	115260825	C	G	single_nucleotide_variant	Uncertain_significance	not_provided	SO:0001583\|missense_variant	SO:0001583\|missense_variant
CSDE1	chr1	115260842	G	T	single_nucleotide_variant	Benign	not_provided	SO:0001627\|intron_variant	SO:0001627\|intron_variant
CSDE1	chr1	115262282	G	A	single_nucleotide_variant	Likely_pathogenic	CSDE1-associated_disorder	SO:0001587\|nonsense	SO:0001587\|nonsense
CSDE1	chr1	115262319	A	G	single_nucleotide_variant	Benign	not_provided	SO:0001819\|synonymous_variant	SO:0001819\|synonymous_variant
CSDE1	chr1	115262346	ATAGT	A	Deletion	Uncertain_significance	not_provided	SO:0001589\|frameshift_variant	SO:0001589\|frameshift_variant
CSDE1	chr1	115262367	A	G	single_nucleotide_variant	Benign	not_provided	SO:0001627\|intron_variant	SO:0001627\|intron_variant
CSDE1	chr1	115263247	T	C	single_nucleotide_variant	Benign	not_provided	SO:0001819\|synonymous_variant	SO:0001819\|synonymous_variant
CSDE1	chr1	115273037	G	A	single_nucleotide_variant	Uncertain_significance	not_provided	SO:0001583\|missense_variant	SO:0001583\|missense_variant
CSDE1	chr1	115279399	A	G	single_nucleotide_variant	Benign	not_provided	SO:0001819\|synonymous_variant	SO:0001819\|synonymous_variant
CSDE1	chr1	115280649	G	GT	Duplication	Uncertain_significance	not_provided	SO:0001589\|frameshift_variant	SO:0001589\|frameshift_variant
CSDE1	chr1	115280668	C	T	single_nucleotide_variant	Benign	not_provided	SO:0001819\|synonymous_variant	SO:0001819\|synonymous_variant
CSDE1	chr1	115282337	T	C	single_nucleotide_variant	Uncertain_significance	not_provided	SO:0001583\|missense_variant	SO:0001583\|missense_variant
CSDE1	chr1	115282351	G	C	single_nucleotide_variant	Uncertain_significance	not_provided	SO:0001587\|nonsense	SO:0001587\|nonsense
CSDE1	chr1	115284260	G	C	single_nucleotide_variant	Likely_pathogenic	not_provided	SO:0001587\|nonsense,SO:0001627\|intron_variant	SO:0001587\|nonsense,SO:0001627\|intron_variant

nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.

SNVs and Indels

Gene	Cancer type	Chromosome	Start	End	RefSeeq	MutSeq	Mutation type	AAchange	# samples
CSDE1	UCEC	chr1	115277125	115277125	G	A	Missense_Mutation	p.R189C	8
CSDE1	LUAD	chr1	115267878	115267878	T	C	Missense_Mutation	p.K619E	6
CSDE1	UCEC	chr1	115261263	115261263	G	A	Missense_Mutation	p.R789C	4
CSDE1	PRAD	chr1	115262240	115262240	G	A	Missense_Mutation	p.R772C	4
CSDE1	UCEC	chr1	115280661	115280661	G	A	Missense_Mutation	p.R124W	3
CSDE1	PCPG	chr1	115272878	115272878	C	T	Splice_Site		3
CSDE1	BRCA	chr1	115276687	115276687	G	A	Missense_Mutation	p.H227Y	3
CSDE1	PCPG	chr1	115267956	115267956	T	A	Splice_Site		3
CSDE1	BRCA	chr1	115276687	115276687	G	C	Missense_Mutation	p.H227D	3
CSDE1	LIHC	chr1	115262317	115262317	A	-	Frame_Shift_Del	p.F746fs	3
CSDE1	UCEC	chr1	115280681	115280681	A	C	Missense_Mutation	p.F117C	3
CSDE1	LIHC	chr1	115267861	115267861	T	-	Frame_Shift_Del	p.K624fs	2
CSDE1	UCEC	chr1	115280616	115280616	C	A	Nonsense_Mutation	p.E139*	2
CSDE1	LGG	chr1	115276643	115276643	G	A	Silent	p.G272G	2
CSDE1	UCEC	chr1	115262355	115262355	G	T	Missense_Mutation	p.F702L	2
CSDE1	UCEC	chr1	115275266	115275266	G	T	Missense_Mutation	p.L352M	2
CSDE1	ESCA	chr1	115275390	115275390	T	C	Silent		2
CSDE1	LIHC	chr1	115275252	115275252	A	-	Frame_Shift_Del	p.F387fs	2
CSDE1	UCEC	chr1	115263239	115263239	A	G	Missense_Mutation	p.V673A	2
CSDE1	STAD	chr1	115273234	115273234	G	A	Silent		2
CSDE1	PAAD	chr1	115269646	115269646	G	A	Silent		2
CSDE1	SARC	chr1	115261346	115261346	G	T	Missense_Mutation		2
CSDE1	UCEC	chr1	115275287	115275287	G	A	Nonsense_Mutation	p.R345*	2
CSDE1	BLCA	chr1	115268894	115268894	C	T	Silent	p.L572L	2
CSDE1	UCEC	chr1	115263259	115263259	G	A	Silent	p.S666	2
CSDE1	STAD	chr1	115273234	115273234	G	A	Silent	p.F408F	2
CSDE1	UCEC	chr1	115276472	115276472	C	A	Nonsense_Mutation	p.E255*	2
CSDE1	LIHC	chr1	115275369	115275369	T	A	Missense_Mutation		2
CSDE1	UCEC	chr1	115267885	115267885	T	G	Missense_Mutation	p.K585N	2
CSDE1	UCEC	chr1	115276691	115276691	G	T	Missense_Mutation	p.F225L	2
CSDE1	UCEC	chr1	115260812	115260812	C	T	Missense_Mutation	p.R807H	2
CSDE1	UCEC	chr1	115267909	115267909	G	A	Silent	p.V577	2
CSDE1	UCEC	chr1	115277082	115277082	C	T	Missense_Mutation	p.G203E	2
CSDE1	ESCA	chr1	115275390	115275390	T	C	Silent	p.K341K	2
CSDE1	UCEC	chr1	115267948	115267948	G	T	Missense_Mutation	p.F564L	2
CSDE1	DLBC	chr1	115272916	115272916	T	C	Missense_Mutation	p.N486S	2
CSDE1	UCEC	chr1	115277115	115277115	A	C	Missense_Mutation	p.M192R	2
CSDE1	KIRP	chr1	115277116	115277116	T	A	Missense_Mutation	p.M223L	2
CSDE1	UCEC	chr1	115261332	115261332	C	A	Missense_Mutation	p.D766Y	2
CSDE1	UCEC	chr1	115268887	115268887	T	G	Missense_Mutation	p.N544H	2
CSDE1	PAAD	chr1	115272969	115272969	G	A	Silent	p.S468S	2
CSDE1	BRCA	chr1	115284280	115284280	C	T	Silent	p.E2	2
CSDE1	UCEC	chr1	115262208	115262208	C	T	Nonsense_Mutation	p.W751*	2
CSDE1	UCEC	chr1	115268938	115268938	G	A	Missense_Mutation	p.R527C	2
CSDE1	UCEC	chr1	115277136	115277136	G	A	Missense_Mutation	p.A185V	2
CSDE1	LIHC	chr1	115275369	115275369	T	A	Missense_Mutation	p.K348N	2
CSDE1	UCEC	chr1	115262222	115262222	C	G	Missense_Mutation	p.A747P	2
CSDE1	UCEC	chr1	115272974	115272974	G	T	Missense_Mutation	p.H436N	2
CSDE1	PAAD	chr1	115269646	115269646	G	A	Silent	p.A520A	2
CSDE1	UCEC	chr1	115280120	115280120	G	A	Missense_Mutation	p.T125I	2
CSDE1	UCEC	chr1	115262239	115262239	C	T	Missense_Mutation	p.R741H	2
CSDE1	UCEC	chr1	115273209	115273209	G	A	Missense_Mutation	p.R386C	2
CSDE1	UCEC	chr1	115280598	115280598	G	A	Nonsense_Mutation	p.R145*	2
CSDE1	UCEC	chr1	115262240	115262240	G	A	Missense_Mutation	p.R741C	2
CSDE1	UCEC	chr1	115273261	115273261	A	G	Silent	p.I368	2
CSDE1	HNSC	chr1	115267850	115267850	G	A	Missense_Mutation	p.T582I	1
CSDE1	PAAD	chr1	115263337	115263337	G	A	Splice_Site	p.G671_splice	1
CSDE1	SKCM	chr1	115268872	115268872	C	T	Missense_Mutation	p.E580K	1
CSDE1	CESC	chr1	115267844	115267844	G	C	Nonsense_Mutation	p.S630*	1
CSDE1	GBM	chr1	115269008	115269008	C	A	Splice_Site		1
CSDE1	BLCA	chr1	115279464	115279464	G	C	Missense_Mutation		1
CSDE1	COAD	chr1	115280605	115280605	A	C	Silent	p.P96P	1
CSDE1	LUAD	chr1	115280105	115280105	T	C	Missense_Mutation	p.Y176C	1
CSDE1	PCPG	chr1	115267956	115267956	T	A	Splice_Site	.	1
CSDE1	SKCM	chr1	115276466	115276495	CAACTTCTTTACCCTAAATCAGAAGGGGTT	-	Splice_Site	p.284_splice	1
CSDE1	STAD	chr1	115268968	115268968	G	A	Nonsense_Mutation	p.Q502*	1
CSDE1	SARC	chr1	115275234	115275234	G	T	Silent		1
CSDE1	THCA	chr1	115276368	115276368	T	A	Silent	p.V320V	1
CSDE1	BLCA	chr1	115262243	115262243	G	A	Nonsense_Mutation	p.Q771*	1
CSDE1	HNSC	chr1	115282405	115282405	G	T	Missense_Mutation		1
CSDE1	LIHC	chr1	115275399	115275399	C	A	Silent		1
CSDE1	PAAD	chr1	115263337	115263337	G	A	Silent		1
CSDE1	HNSC	chr1	115282405	115282405	G	T	Missense_Mutation	p.S36Y	1
CSDE1	PAAD	chr1	115263337	115263337	G	A	Splice_Site	p.G625G	1
CSDE1	SKCM	chr1	115266543	115266543	G	A	Nonsense_Mutation	p.Q658*	1
CSDE1	UCEC	chr1	115268938	115268938	G	A	Missense_Mutation	p.R558C	1
CSDE1	CESC	chr1	115277086	115277086	G	A	Nonsense_Mutation		1
CSDE1	GBM	chr1	115261297	115261297	C	A	Silent		1
CSDE1	STAD	chr1	115261368	115261368	T	C	Splice_Site	p.C739_splice	1
CSDE1	BLCA	chr1	115261332	115261332	C	T	Missense_Mutation		1
CSDE1	COAD	chr1	115261289	115261289	G	A	Missense_Mutation	p.A780V	1
CSDE1	LGG	chr1	115273208	115273208	C	T	Missense_Mutation	p.R417H	1
CSDE1	PCPG	chr1	115272911	115272912	-	C	Frame_Shift_Ins	p.K488fs	1
CSDE1	THYM	chr1	115280605	115280605	A	C	Silent		1
CSDE1	ESCA	chr1	115268842	115268842	A	T	Missense_Mutation	p.F590I	1
CSDE1	HNSC	chr1	115280598	115280598	G	C	Missense_Mutation		1
CSDE1	LIHC	chr1	115284203	115284203	G	A	Missense_Mutation		1
CSDE1	HNSC	chr1	115280598	115280598	G	C	Missense_Mutation	p.R99G	1
CSDE1	LIHC	chr1	115272999	115272999	T	-	Frame_Shift_Del	p.K458fs	1
CSDE1	PAAD	chr1	115269646	115269646	G	A	Silent	p.A474A	1
CSDE1	SKCM	chr1	115275374	115275374	C	G	Missense_Mutation	p.D347H	1
CSDE1	UCEC	chr1	115260812	115260812	C	T	Missense_Mutation	p.R838H	1
CSDE1	CESC	chr1	115277086	115277086	G	A	Nonsense_Mutation	p.Q202*	1
CSDE1	GBM	chr1	115269683	115269683	T	C	Missense_Mutation		1
CSDE1	STAD	chr1	115276643	115276643	G	A	Silent	p.G226G	1
CSDE1	BLCA	chr1	115272911	115272929	TAGGATTGGAAAAAGTGGC	-	Frame_Shift_Del		1
CSDE1	COAD	chr1	115262217	115262217	A	G	Silent	p.C702C	1
CSDE1	LGG	chr1	115267900	115267900	G	A	Silent	p.S611S	1
CSDE1	LUAD	chr1	115266587	115266587	T	A	Missense_Mutation	p.Y643F	1
CSDE1	PCPG	chr1	115272878	115272878	C	T	Splice_Site	.	1
CSDE1	PAAD	chr1	115272879	115272879	C	A	Missense_Mutation		1
CSDE1	SARC	chr1	115272888	115272888	G	T	Silent		1
CSDE1	THYM	chr1	115266562	115266562	C	T	Silent		1
CSDE1	BLCA	chr1	115266549	115266549	G	A	Missense_Mutation	p.P656S	1
CSDE1	ESCA	chr1	115268845	115268845	A	T	Missense_Mutation	p.F589I	1
CSDE1	HNSC	chr1	115268984	115268984	T	C	Silent	p.K542K	1
CSDE1	KICH	chr1	115280677	115280682	TTCAAA	-	In_Frame_Del		1
CSDE1	LIHC	chr1	115284178	115284178	T	-	Frame_Shift_Del	p.K36fs	1
CSDE1	PAAD	chr1	115272969	115272969	G	A	Silent	p.S422S	1
CSDE1	SKCM	chr1	115272959	115272959	G	A	Missense_Mutation	p.H472Y	1
CSDE1	UCEC	chr1	115277125	115277125	G	A	Missense_Mutation	p.R220C	1
CSDE1	CESC	chr1	115292556	115292556	G	C	RNA	NULL	1
CSDE1	HNSC	chr1	115268984	115268984	T	C	Silent		1
CSDE1	STAD	chr1	115272943	115272943	G	A	Missense_Mutation	p.T431M	1
CSDE1	BLCA	chr1	115273250	115273250	C	T	Missense_Mutation		1
CSDE1	DLBC	chr1	115276720	115276720	C	A	Nonsense_Mutation	p.E247X	1
CSDE1	LGG	chr1	115267955	115267955	C	T	Splice_Site		1
CSDE1	LUAD	chr1	115261262	115261262	C	G	Missense_Mutation	p.R820P	1
CSDE1	PCPG	chr1	115272911	115272912	-	C	Frame_Shift_Ins	p.N488fs	1
CSDE1	PAAD	chr1	115272969	115272969	G	A	Silent		1
CSDE1	SKCM	chr1	115263252	115263252	A	C	Missense_Mutation	p.F623V	1
CSDE1	UCEC	chr1	115267885	115267885	T	G	Missense_Mutation	p.K616N	1
CSDE1	BLCA	chr1	115261316	115261316	C	G	Missense_Mutation	p.R802P	1
CSDE1	ESCA	chr1	115268876	115268877	-	AATC	Frame_Shift_Ins	p.F578fs	1
CSDE1	HNSC	chr1	115272925	115272925	G	T	Missense_Mutation	p.T483N	1
CSDE1	LIHC	chr1	115267860	115267860	C	T	Missense_Mutation	p.V625M	1
CSDE1	KIRC	chr1	115276472	115276478	CTTTACC	-	Splice_Site	p.GKE284_splice	1
CSDE1	LIHC	chr1	115280606	115280606	G	-	Frame_Shift_Del	p.P142fs	1
CSDE1	PAAD	chr1	115275328	115275328	A	G	Missense_Mutation	p.V316A	1
CSDE1	SKCM	chr1	115272906	115272906	G	A	Silent	p.T489T	1
CSDE1	STAD	chr1	115272943	115272943	G	A	Missense_Mutation	p.T477M	1
CSDE1	CHOL	chr1	115262239	115262239	C	T	Missense_Mutation	p.R772H	1
CSDE1	HNSC	chr1	115272925	115272925	G	T	Missense_Mutation		1
CSDE1	STAD	chr1	115263163	115263163	A	T	Missense_Mutation	p.D683E	1
CSDE1	BLCA	chr1	115268894	115268894	C	T	Silent		1
CSDE1	DLBC	chr1	115269685	115269685	A	G	Silent	p.Y507Y	1
CSDE1	LGG	chr1	115267900	115267900	G	A	Silent		1
CSDE1	LUAD	chr1	115266602	115266602	G	C	Missense_Mutation	p.A638G	1
CSDE1	PCPG	chr1	115268982	115268985	TGTT	-	Frame_Shift_Del	p.KQ542fs	1
CSDE1	PAAD	chr1	115275328	115275328	A	G	Missense_Mutation		1
CSDE1	SKCM	chr1	115276669	115276669	C	T	Missense_Mutation	p.G187S	1
CSDE1	UCEC	chr1	115279440	115279440	C	T	Missense_Mutation	p.E193K	1
CSDE1	BLCA	chr1	115261332	115261332	C	T	Missense_Mutation	p.D751N	1
CSDE1	HNSC	chr1	115267850	115267850	G	A	Missense_Mutation	p.T628I	1
CSDE1	LIHC	chr1	115282361	115282361	A	G	Missense_Mutation	p.F97L	1
CSDE1	KIRP	chr1	115280171	115280171	A	T	Missense_Mutation	p.V154D	1
CSDE1	LIHC	chr1	115268902	115268902	C	-	Frame_Shift_Del	p.A570fs	1
CSDE1	PAAD	chr1	115282502	115282502	C	A	Missense_Mutation	p.D4Y	1
CSDE1	SKCM	chr1	115263252	115263252	A	C	Missense_Mutation	p.F700V	1
CSDE1	STAD	chr1	115268968	115268968	G	A	Nonsense_Mutation	p.Q548X	1
CSDE1	COAD	chr1	115260813	115260813	G	A	Missense_Mutation	p.R761C	1
CSDE1	HNSC	chr1	115267850	115267850	G	A	Missense_Mutation		1
CSDE1	STAD	chr1	115266562	115266562	C	T	Silent	p.L605L	1
CSDE1	BLCA	chr1	115282391	115282391	G	T	Missense_Mutation		1
CSDE1	LGG	chr1	115273208	115273208	C	T	Missense_Mutation		1
CSDE1	LUAD	chr1	115266615	115266615	T	C	Missense_Mutation	p.I634V	1
CSDE1	LUAD	chr1	115266587	115266587	T	A	Missense_Mutation	p.Y597F	1
CSDE1	PCPG	chr1	115261367	115261367	C	T	Splice_Site		1
CSDE1	PAAD	chr1	115272879	115272879	C	A	Missense_Mutation	p.K498N	1
CSDE1	SKCM	chr1	115276670	115276670	C	T	Silent	p.K186K	1
CSDE1	UCEC	chr1	115272942	115272942	C	T	Silent	p.T477T	1
CSDE1	BLCA	chr1	115262243	115262243	G	A	Nonsense_Mutation	p.Q725*	1
CSDE1	ESCA	chr1	115263192	115263192	G	C	Missense_Mutation	p.R720G	1
CSDE1	HNSC	chr1	115275262	115275262	G	C	Nonsense_Mutation	p.S384*	1
CSDE1	LIHC	chr1	115262274	115262275	-	G	Frame_Shift_Ins	p.G760fs	1
CSDE1	COAD	chr1	115267916	115267917	-	C	Frame_Shift_Ins	p.D529fs	1
CSDE1	LIHC	chr1	115269652	115269652	A	-	Frame_Shift_Del	p.F518fs	1
CSDE1	PCPG	chr1	115268982	115268985	TGTT	-	Frame_Shift_Del		1
CSDE1	SKCM	chr1	115277068	115277068	T	A	Missense_Mutation	p.M239L	1
CSDE1	STAD	chr1	115266562	115266562	C	T	Silent	p.L651L	1
CSDE1	STAD	chr1	115261289	115261289	G	A	Missense_Mutation	p.A765V	1
CSDE1	BLCA	chr1	115266549	115266549	G	A	Missense_Mutation		1
CSDE1	ESCA	chr1	115268876	115268877	-	AATC	Frame_Shift_Ins	p.F547fs	1
CSDE1	LGG	chr1	115276643	115276643	G	A	Silent		1
CSDE1	LUAD	chr1	115260835	115260835	C	-	Frame_Shift_Del	p.G830fs	1
CSDE1	LUAD	chr1	115266602	115266602	G	C	Missense_Mutation	p.A592G	1
CSDE1	SKCM	chr1	115266543	115266543	G	A	Nonsense_Mutation	p.Q581X	1
CSDE1	UCEC	chr1	115277115	115277115	A	C	Missense_Mutation	p.M223R	1
CSDE1	ESCA	chr1	115268876	115268877	-	AATC	Frame_Shift_Ins	p.Y578fs	1
CSDE1	HNSC	chr1	115282405	115282405	G	T	Missense_Mutation	p.S82Y	1
CSDE1	LIHC	chr1	115272999	115272999	T	-	Frame_Shift_Del	p.L459fs	1
CSDE1	COAD	chr1	115267948	115267948	G	T	Missense_Mutation	p.F518L	1
CSDE1	KIRP	chr1	115277116	115277116	T	A	Missense_Mutation	p.M146L	1
CSDE1	LUAD	chr1	115273174	115273174	C	T	Silent	p.G428G	1
CSDE1	SKCM	chr1	115269623	115269623	G	A	Missense_Mutation	p.S528F	1
CSDE1	STAD	chr1	115261289	115261289	G	A	Missense_Mutation	p.A811V	1
CSDE1	STAD	chr1	115272955	115272955	C	T	Missense_Mutation	p.R427H	1
CSDE1	BLCA	chr1	115261316	115261316	C	G	Missense_Mutation		1
CSDE1	ESCA	chr1	115277064	115277064	T	-	Frame_Shift_Del	p.K209fs	1
CSDE1	LGG	chr1	115261338	115261338	G	T	Silent		1
CSDE1	LUAD	chr1	115273174	115273174	C	T	Silent	p.G382G	1
CSDE1	LUSC	chr1	115275301	115275301	C	T	Missense_Mutation	p.R371H	1
CSDE1	READ	chr1	115267924	115267924	T	C	Silent	p.E526E	1
CSDE1	PAAD	chr1	115263337	115263337	G	A	Silent	p.G671G	1
CSDE1	SKCM	chr1	115276684	115276687	AGTG	-	Frame_Shift_Del	p.181_182del	1
CSDE1	UCEC	chr1	115277082	115277082	C	T	Missense_Mutation	p.G234E	1
CSDE1	ESCA	chr1	115263192	115263192	G	C	Missense_Mutation		1
CSDE1	HNSC	chr1	115280598	115280598	G	C	Missense_Mutation	p.R145G	1
CSDE1	ACC	chr1	115261240	115261241	-	T	Frame_Shift_Ins	p.N827fs	1
CSDE1	COAD	chr1	115268902	115268902	C	T	Missense_Mutation	p.A493T	1
CSDE1	KIRP	chr1	115280131	115280131	A	G	Silent	p.G167G	1
CSDE1	LUAD	chr1	115273024	115273024	C	A	Missense_Mutation	p.R450I	1
CSDE1	SKCM	chr1	115273131	115273131	G	A	Missense_Mutation	p.P443S	1
CSDE1	STAD	chr1	115272955	115272955	C	T	Missense_Mutation	p.R473H	1
CSDE1	TGCT	chr1	115262299	115262299	T	C	Missense_Mutation		1
CSDE1	BLCA	chr1	115261312	115261312	C	T	Silent		1
CSDE1	ESCA	chr1	115292534	115292534	A	-	RNA	NULL	1
CSDE1	LIHC	chr1	115282495	115282495	T	C	Missense_Mutation		1
CSDE1	LUAD	chr1	115273024	115273024	C	A	Missense_Mutation	p.R404I	1
CSDE1	LUSC	chr1	115269613	115269613	T	C	Missense_Mutation	p.I531M	1
CSDE1	READ	chr1	115268937	115268937	C	T	Missense_Mutation	p.R481H	1
CSDE1	HNSC	chr1	115272925	115272925	G	T	Missense_Mutation	p.T437N	1
CSDE1	LIHC	chr1	115260834	115260835	-	C	Frame_Shift_Ins	p.W831fs	1
CSDE1	SKCM	chr1	115276669	115276669	C	T	Missense_Mutation	p.G264S	1
CSDE1	UCEC	chr1	115262208	115262208	C	T	Nonsense_Mutation	p.W782*	1
CSDE1	GBM	chr1	115269683	115269683	T	C	Missense_Mutation	p.D508G	1
CSDE1	ACC	chr1	115261240	115261241	-	T	Frame_Shift_Ins	p.N750fs	1
CSDE1	COAD	chr1	115268905	115268905	C	-	Frame_Shift_Del	p.V492fs	1
CSDE1	KIRP	chr1	115277116	115277116	T	A	Missense_Mutation		1
CSDE1	LUAD	chr1	115280655	115280655	C	G	Missense_Mutation	p.G126R	1
CSDE1	PCPG	chr1	115272911	115272912	-	-	Frame_Shift_Ins		1
CSDE1	SKCM	chr1	115275382	115275382	G	A	Missense_Mutation	p.P344L	1
CSDE1	STAD	chr1	115275417	115275417	G	A	Silent	p.R332R	1
CSDE1	TGCT	chr1	115262299	115262299	T	C	Missense_Mutation	p.Q752R	1
CSDE1	BLCA	chr1	115279464	115279464	G	C	Missense_Mutation	p.L185V	1
CSDE1	ESCA	chr1	115275390	115275390	T	C	Silent	p.K310	1
CSDE1	LIHC	chr1	115276671	115276671	T	C	Missense_Mutation		1
CSDE1	OV	chr1	115084017	115084017	G	A	Silent	p.N6	1
CSDE1	READ	chr1	115275363	115275363	C	T	Silent	p.T273T	1
CSDE1	HNSC	chr1	115261328	115261328	C	T	Missense_Mutation	p.R752Q	1
CSDE1	PAAD	chr1	115272879	115272879	C	A	Splice_Site	p.K498_splice	1
CSDE1	SKCM	chr1	115276670	115276670	C	T	Silent	p.K263K	1
CSDE1	CESC	chr1	115292556	115292556	G	C	Missense_Mutation		1
CSDE1	GBM	chr1	115272925	115272925	G	C	Missense_Mutation	p.T483S	1
CSDE1	ACC	chr1	115261240	115261241	-	T	Frame_Shift_Ins	p.I827fs	1
CSDE1	COAD	chr1	115268907	115268912	TAACCC	-	In_Frame_Del	p.490_491del	1
CSDE1	KIRP	chr1	115276479	115276479	C	A	Splice_Site		1
CSDE1	LUAD	chr1	115262199	115262199	C	T	Splice_Site		1
CSDE1	PCPG	chr1	115268982	115268985	TGTT	-	Frame_Shift_Del	p.542_543del	1
CSDE1	SKCM	chr1	115276684	115276687	AGTG	-	Frame_Shift_Del	p.HY258fs	1
CSDE1	STAD	chr1	115263163	115263163	A	T	Missense_Mutation	p.D729E	1
CSDE1	THCA	chr1	115276367	115276367	G	A	Missense_Mutation	p.P321S	1
CSDE1	BLCA	chr1	115261332	115261332	C	T	Missense_Mutation	p.D797N	1
CSDE1	ESCA	chr1	115268876	115268877	-	-	Frame_Shift_Ins		1
CSDE1	LIHC	chr1	115279449	115279449	C	T	Missense_Mutation		1
CSDE1	OV	chr1	115282409	115282409	T	G	Missense_Mutation	p.T35P	1
CSDE1	READ	chr1	115266570	115266570	G	A	Missense_Mutation	p.R572C	1

Copy number variation (CNV) of CSDE1
* Click on the image to open the original image in a new window.

Fusion gene breakpoints (product of the structural variants (SVs)) across CSDE1
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Fusion genes with this translation factor from FusionGDB2.0.

FusionGDB2 ID	Disease	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
101933	STAD	TCGA-BR-8080-01A	ACOT11	chr1	55065088	+	CSDE1	chr1	115261366	-
101933	N/A	CA440341	ANKRD10	chr13	111545097	+	CSDE1	chr1	115275319	-
101933	BRCA	TCGA-B6-A402-01A	ARHGEF10L	chr1	18014242	+	CSDE1	chr1	115292828	-
101933	N/A	AW973544	BAZ2A	chr12	56992252	+	CSDE1	chr1	115260703	+
101933	GBM	TCGA-02-2486-01A	C11orf49	chr11	47008861	+	CSDE1	chr1	115292828	-
62676	N/A	FN081452	CSDE1	chr1	115260553	+	ALS2	chr2	202576908	-
100868	N/A	AL039222	CSDE1	chr1	115276609	-	BCL11B	chr14	99673504	-
102746	N/A	AW995806	CSDE1	chr1	115273251	+	CLASP1	chr2	122357878	+
101933	N/A	BF752097	CSDE1	chr1	115260051	-	CSDE1	chr1	115260458	+
99525	HNSC	TCGA-CR-7374-01A	CSDE1	chr1	115280620	-	CYB5B	chr16	69464057	+
102756	LUAD	TCGA-78-7149-01A	CSDE1	chr1	115259916	-	DDX27	chr20	47849303	+
58761	BRCA	TCGA-E9-A244	CSDE1	chr1	115292441	-	DENND2C	chr1	115168809	-
58761	BRCA	TCGA-E9-A244-01A	CSDE1	chr1	115292442	-	DENND2C	chr1	115168809	-
100497	STAD	TCGA-VQ-AA6J	CSDE1	chr1	115300545	-	ERI3	chr1	44804994	-
78129	LUSC	TCGA-21-1071	CSDE1	chr1	115300545	-	GBE1	chr3	81720104	-
23307	N/A	BQ027507	CSDE1	chr1	115259537	-	NAT10	chr11	34135187	+
101218	OV	TCGA-04-1651	CSDE1	chr1	115300545	-	PPM1B	chr2	44428324	+
84215	N/A	CD652483	CSDE1	chr1	115280589	-	RANBP2	chr2	110257643	+
102362	OV	TCGA-31-1946	CSDE1	chr1	115292441	-	RBFOX1	chr16	7568148	+
102362	OV	TCGA-31-1946-01A	CSDE1	chr1	115292442	-	RBFOX1	chr16	7568149	+
102362	OV	TCGA-31-1946-01A	CSDE1	chr1	115300546	-	RBFOX1	chr16	7568149	+
44866	STAD	TCGA-BR-8483	CSDE1	chr1	115279378	-	ST7L	chr1	113121039	-
44866	STAD	TCGA-BR-8483-01A	CSDE1	chr1	115279379	-	ST7L	chr1	113121039	-
97624	N/A	CD643782	CSDE1	chr1	115280585	-	STXBP4	chr17	53195081	+
92722	Non-Cancer	ERR315333	CSDE1	chr1	115300546	-	TNK2	chr3	195599341	-
94084	GBM	TCGA-14-0817-01A	CSDE1	chr1	115292442	-	TRIM33	chr1	115007010	-
103127	N/A	DA635461	CSDE1	chr1	115260801	-	ZNFX1	chr20	47865650	-
101933	N/A	DA903661	H2AFZ	chr4	100870059	-	CSDE1	chr1	115282348	-
101933	STAD	TCGA-BR-A4QI-01A	NQO2	chr6	3006793	+	CSDE1	chr1	115282346	-
101933	Non-Cancer	ERR315342	PC	chr11	66616353	-	CSDE1	chr1	115269670	-
101933	OV	TCGA-31-1951	PIP5K1A	chr1	151205179	+	CSDE1	chr1	115261366	-
101933	STAD	TCGA-FP-8210-01A	RASAL2	chr1	178269253	+	CSDE1	chr1	115292828	-
101933	N/A	BF978658	RPS27L	chr15	63448638	-	CSDE1	chr1	115260758	-
101933	N/A	EC503592	SPATA5	chr4	123941206	-	CSDE1	chr1	115266625	-
101933	STAD	TCGA-BR-8365-01A	SPEG	chr2	220309883	+	CSDE1	chr1	115263307	-
101933	Non-Cancer	43N	TMED5	chr1	93645610	-	CSDE1	chr1	115282511	-
101933	BRCA	TCGA-BH-A0H0-01A	TRIM33	chr1	114970370	-	CSDE1	chr1	115280693	-
101933	PRAD	TCGA-CH-5751	TRIM33	chr1	114945381	-	CSDE1	chr1	115282511	-
101933	PRAD	TCGA-CH-5751	TRIM33	chr1	114945382	-	CSDE1	chr1	115282511	-
101933	STAD	TCGA-BR-A4PE-01A	VANGL1	chr1	116184707	+	CSDE1	chr1	115292828	-
101935	N/A	BF217277	ZNF354C	chr5	178509517	-	CSDE1	chr1	115262367	-

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Prognostic Analysis

Kaplan-Meier plots with logrank tests of overall survival (OS)

Cancer type

Translation factor

Coefficent

Hazard ratio

Wald test pval

Likelihool ratio pval

Logrank test pval

# samples

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Translation factor and Gender

Differential gene expression between female and male. (Wilcoxon test, pval<0.05)

Cancer type	Translation factor	pval	adj.p
KIRP	CSDE1	0.000195285858283516	0.0055
TGCT	CSDE1	0.00379331728448299	0.1

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Translation factor and Age

Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)

Cancer type	Translation factor	pval	adj.p
LUSC	CSDE1	0.0162494621428774	0.52
LGG	CSDE1	1.15652983966752e-05	0.00038
BRCA	CSDE1	0.0356433052687329	1
THYM	CSDE1	0.0192525819584621	0.6
HNSC	CSDE1	0.0324525072614666	0.97

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Related Drugs

Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases

Diseases associated with this translation factor.
(DisGeNet 4.0)

Disease ID	Disease Name	# PubMeds	Disease source
C0004352	Autistic Disorder	1	GENOMICS_ENGLAND
C0557874	Global developmental delay	1	GENOMICS_ENGLAND