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Translation Factor: MKNK1 (NCBI Gene ID:8569) |
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Gene Summary |
| Gene Information | Gene Name: MKNK1 | Gene ID: 8569 | Gene Symbol | MKNK1 | Gene ID | 8569 |
| Gene Name | MAPK interacting serine/threonine kinase 1 | |
| Synonyms | MNK1 | |
| Cytomap | 1p33 | |
| Type of Gene | protein-coding | |
| Description | MAP kinase-interacting serine/threonine-protein kinase 1MAP kinase interacting serine/threonine kinase 1MAP kinase signal-integrating kinase 1MAPK signal-integrating kinase 1 | |
| Modification date | 20200327 | |
| UniProtAcc | Q9BUB5 | |
Child GO biological process term(s) under GO:0006412 |
| GO ID | GO term |
| GO:0006417 | Regulation of translation |
| GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | MKNK1 | GO:0006468 | protein phosphorylation | 9155018 |
| Hgene | MKNK1 | GO:0018105 | peptidyl-serine phosphorylation | 17130135 |
| Hgene | MKNK1 | GO:0035556 | intracellular signal transduction | 9155018 |
Inferred gene age of translation factor. |
| Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
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We searched PubMed using 'MKNK1[title] AND translation [title] AND human.' |
| Gene | Title | PMID |
| MKNK1 | FLI1 promotes protein translation via the transcriptional regulation of MKNK1 expression | 31894299 |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
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Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
| ENST00000371946 | 47025905 | 47025949 | Frame-shift |
| ENST00000371946 | 47028320 | 47028515 | In-frame |
| ENST00000371946 | 47037088 | 47037211 | In-frame |
| ENST00000371946 | 47040618 | 47040692 | Frame-shift |
| ENST00000371946 | 47046201 | 47046299 | Frame-shift |
Exon skipping position in the amino acid sequence. |
| ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
| ENST00000371946 | 47028320 | 47028515 | 2736 | 933 | 1127 | 465 | 256 | 321 |
| ENST00000371946 | 47037088 | 47037211 | 2736 | 658 | 780 | 465 | 164 | 205 |
Potentially (partially) lost protein functional features of UniProt. |
| UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
| Q9BUB5 | 256 | 321 | 1 | 465 | Chain | ID=PRO_0000086334;Note=MAP kinase-interacting serine/threonine-protein kinase 1 |
| Q9BUB5 | 164 | 205 | 1 | 465 | Chain | ID=PRO_0000086334;Note=MAP kinase-interacting serine/threonine-protein kinase 1 |
| Q9BUB5 | 256 | 321 | 49 | 374 | Domain | Note=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159 |
| Q9BUB5 | 164 | 205 | 49 | 374 | Domain | Note=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159 |
| Q9BUB5 | 164 | 205 | 165 | 205 | Alternative sequence | ID=VSP_007352;Note=In isoform 2 and isoform 3. Missing;Ontology_term=ECO:0000303,ECO:0000303;evidence=ECO:0000303|PubMed:15350534,ECO:0000303|PubMed:9155018;Dbxref=PMID:15350534,PMID:9155018 |
| Q9BUB5 | 256 | 321 | 308 | 308 | Natural variant | ID=VAR_040803;Note=D->N;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17344846;Dbxref=dbSNP:rs55791614,PMID:17344846 |
| Q9BUB5 | 256 | 321 | 271 | 274 | Beta strand | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:2HW6 |
| Q9BUB5 | 256 | 321 | 277 | 296 | Helix | Ontology_term=ECO:0000244;evidence=ECO:0000244|PDB:2HW6 |
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Gene expression level across TCGA pancancer |
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Gene expression level across GTEx pantissue |
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Expression level of gene isoforms across TCGA pancancer |
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Expression level of gene isoforms across GTEx pantissue |
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Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
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Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
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| Cancer type | Translation factor | FC | adj.pval |
| LUSC | MKNK1 | -1.7724058315911 | 0.000119179323433261 |
| LUAD | MKNK1 | -1.64881335054025 | 0.000184346986492713 |
| KIRP | MKNK1 | -1.83550648151309 | 0.00608485564589501 |
| KIRC | MKNK1 | -1.36155431828684 | 4.53899662243056e-11 |
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Translation factor expression regulation through miRNA binding |
| Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
| DLBC | MKNK1 | hsa-miR-497-5p | 99 | -0.334990749306198 | 0.0218151554907431 |
Translation factor expression regulation through methylation in the promoter of Translation factor |
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| Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
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| Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
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| Cancer type | Gene | Coefficient | Pvalue |
| PAAD | MKNK1 | -0.37363847 | 0.028366944 |
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Strongly correlated genes belong to cellular important gene groups with MKNK1 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
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| Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
| LGG | Cell metabolism gene | MKNK1 | PLCB2 | 0.823596424 | 3.87E-132 |
| LGG | IUPHAR | MKNK1 | PLCB2 | 0.823596424 | 3.87E-132 |
| THYM | Cell metabolism gene | MKNK1 | PLCG1 | 0.800874638 | 1.71E-28 |
| THYM | Cell metabolism gene | MKNK1 | DGKA | 0.801416693 | 1.48E-28 |
| THYM | Cell metabolism gene | MKNK1 | PDE7A | 0.804673282 | 6.07E-29 |
| THYM | Cell metabolism gene | MKNK1 | SLC23A1 | 0.806421072 | 3.75E-29 |
| THYM | Cell metabolism gene | MKNK1 | EDEM1 | 0.807558697 | 2.73E-29 |
| THYM | Cell metabolism gene | MKNK1 | PAFAH2 | 0.815903809 | 2.49E-30 |
| THYM | CGC | MKNK1 | PLCG1 | 0.800874638 | 1.71E-28 |
| THYM | CGC | MKNK1 | ITK | 0.801067361 | 1.62E-28 |
| THYM | CGC | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| THYM | CGC | MKNK1 | MDM4 | 0.8316069 | 1.95E-32 |
| THYM | CGC | MKNK1 | FNBP1 | 0.837829907 | 2.47E-33 |
| THYM | Epifactor | MKNK1 | GFI1 | 0.805634782 | 4.66E-29 |
| THYM | Epifactor | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| THYM | Epifactor | MKNK1 | MSL3 | 0.844080492 | 2.85E-34 |
| THYM | IUPHAR | MKNK1 | PLCG1 | 0.800874638 | 1.71E-28 |
| THYM | IUPHAR | MKNK1 | ITK | 0.801067361 | 1.62E-28 |
| THYM | IUPHAR | MKNK1 | PDE7A | 0.804673282 | 6.07E-29 |
| THYM | IUPHAR | MKNK1 | SLC23A1 | 0.806421072 | 3.75E-29 |
| THYM | IUPHAR | MKNK1 | PAFAH2 | 0.815903809 | 2.49E-30 |
| THYM | IUPHAR | MKNK1 | LAIR1 | 0.819415327 | 8.77E-31 |
| THYM | IUPHAR | MKNK1 | IRAK4 | 0.823241544 | 2.74E-31 |
| THYM | IUPHAR | MKNK1 | CD4 | 0.823897509 | 2.24E-31 |
| THYM | IUPHAR | MKNK1 | NLRC3 | 0.834892754 | 6.62E-33 |
| THYM | IUPHAR | MKNK1 | SLC7A6 | 0.854661094 | 5.85E-36 |
| THYM | IUPHAR | MKNK1 | CYP2U1 | 0.857509817 | 1.95E-36 |
| THYM | Kinase | MKNK1 | ITK | 0.801067361 | 1.62E-28 |
| THYM | Kinase | MKNK1 | IRAK4 | 0.823241544 | 2.74E-31 |
| THYM | TF | MKNK1 | GFI1 | 0.805634782 | 4.66E-29 |
| THYM | TF | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| THYM | TSG | MKNK1 | CD4 | 0.823897509 | 2.24E-31 |
| THYM | TSG | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| UCS | Cell metabolism gene | MKNK1 | PLCG1 | 0.800874638 | 1.71E-28 |
| UCS | Cell metabolism gene | MKNK1 | DGKA | 0.801416693 | 1.48E-28 |
| UCS | Cell metabolism gene | MKNK1 | PDE7A | 0.804673282 | 6.07E-29 |
| UCS | Cell metabolism gene | MKNK1 | SLC23A1 | 0.806421072 | 3.75E-29 |
| UCS | Cell metabolism gene | MKNK1 | EDEM1 | 0.807558697 | 2.73E-29 |
| UCS | Cell metabolism gene | MKNK1 | PAFAH2 | 0.815903809 | 2.49E-30 |
| UCS | CGC | MKNK1 | PLCG1 | 0.800874638 | 1.71E-28 |
| UCS | CGC | MKNK1 | ITK | 0.801067361 | 1.62E-28 |
| UCS | CGC | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| UCS | CGC | MKNK1 | MDM4 | 0.8316069 | 1.95E-32 |
| UCS | CGC | MKNK1 | FNBP1 | 0.837829907 | 2.47E-33 |
| UCS | Epifactor | MKNK1 | GFI1 | 0.805634782 | 4.66E-29 |
| UCS | Epifactor | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| UCS | Epifactor | MKNK1 | MSL3 | 0.844080492 | 2.85E-34 |
| UCS | IUPHAR | MKNK1 | PLCG1 | 0.800874638 | 1.71E-28 |
| UCS | IUPHAR | MKNK1 | ITK | 0.801067361 | 1.62E-28 |
| UCS | IUPHAR | MKNK1 | PDE7A | 0.804673282 | 6.07E-29 |
| UCS | IUPHAR | MKNK1 | SLC23A1 | 0.806421072 | 3.75E-29 |
| UCS | IUPHAR | MKNK1 | PAFAH2 | 0.815903809 | 2.49E-30 |
| UCS | IUPHAR | MKNK1 | LAIR1 | 0.819415327 | 8.77E-31 |
| UCS | IUPHAR | MKNK1 | IRAK4 | 0.823241544 | 2.74E-31 |
| UCS | IUPHAR | MKNK1 | CD4 | 0.823897509 | 2.24E-31 |
| UCS | IUPHAR | MKNK1 | NLRC3 | 0.834892754 | 6.62E-33 |
| UCS | IUPHAR | MKNK1 | SLC7A6 | 0.854661094 | 5.85E-36 |
| UCS | IUPHAR | MKNK1 | CYP2U1 | 0.857509817 | 1.95E-36 |
| UCS | Kinase | MKNK1 | ITK | 0.801067361 | 1.62E-28 |
| UCS | Kinase | MKNK1 | IRAK4 | 0.823241544 | 2.74E-31 |
| UCS | TF | MKNK1 | GFI1 | 0.805634782 | 4.66E-29 |
| UCS | TF | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
| UCS | TSG | MKNK1 | CD4 | 0.823897509 | 2.24E-31 |
| UCS | TSG | MKNK1 | IKZF1 | 0.829527434 | 3.81E-32 |
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Protein 3D structureVisit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
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Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
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![]() * Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
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| Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
| KICH | MKNK1 | MAPK1 | 1.27319002595358 | 0.000911891460418701 |
| BRCA | MKNK1 | MAPK3 | -1.61909976139263 | 0.00193136402459222 |
| KIRC | MKNK1 | SPRY2 | -2.59697267350469 | 0.00224635330560483 |
| CHOL | MKNK1 | MAPK3 | -1.54068193424676 | 0.00390625 |
| ESCA | MKNK1 | PLA2G4A | 2.72869699779812 | 0.0048828125 |
| KICH | MKNK1 | EIF4G1 | -1.46656081150743 | 0.00612920522689819 |
| LUAD | MKNK1 | PPP2CA | -2.59279455680557 | 0.00847843979516537 |
| KICH | MKNK1 | PLA2G4A | -3.72927591791215 | 0.0135546922683716 |
| ESCA | MKNK1 | MAPK1 | -1.17755474324053 | 0.0185546875 |
| KIRC | MKNK1 | PPP2CA | -1.27046306822435 | 0.0253347545755805 |
| ESCA | MKNK1 | EIF4A1 | -1.24538073199285 | 0.0419921875 |
| ESCA | MKNK1 | SPRY2 | 2.51618835128384 | 0.0419921875 |
| BRCA | MKNK1 | MAPK1 | -1.67954875219151 | 0.0427276834041307 |
| THCA | MKNK1 | PLA2G4A | 1.74612400507597 | 1.06211531258311e-06 |
| BRCA | MKNK1 | MAPK14 | -1.6928131480761 | 1.08867679255958e-06 |
| PRAD | MKNK1 | PLA2G4A | -2.47749288299188 | 1.18254481038506e-06 |
| PRAD | MKNK1 | MAPK14 | 1.20273850965986 | 2.06740855708439e-05 |
| LIHC | MKNK1 | MAPK11 | -2.04244177410399 | 2.35319665208461e-06 |
| LUAD | MKNK1 | SPRY2 | -2.77669688639422 | 4.00021479245452e-09 |
| COAD | MKNK1 | MAPK3 | -1.17173283146352 | 5.66244125366212e-07 |
| KICH | MKNK1 | EIF4E | 1.61675210562671 | 6.55651092529297e-06 |
| LUAD | MKNK1 | PLA2G4A | 1.7409850004622 | 7.52266307692291e-07 |
| KICH | MKNK1 | EIF4A1 | 1.14485583309571 | 8.16583633422851e-06 |
| THCA | MKNK1 | MAPK11 | -4.04478616286993 | 8.27580425414032e-05 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
| PPI interactors with MKNK1 |
| FANCA, MAPK1, EIF4E, EIF4G1, EIF4G2, MAPK3, MAPK14, CREBBP, HSP90AB1, PRKDC, DNAJC7, EIF4G3, DDAH2, ATXN3, UBE2D1, PHAX, SPRY2, APP, RCN3, TNIP2, HGS, HIPK2, MAPK11, MOV10, XPO1, ID1, LLGL2, PDK1, PPIA, RAB5A, MYH13, KIF1C, RNASEH2B, KIF18A, PARD6B, BOD1L1, Flot1, Nek2, Itsn2, Cul1, Mkln1, Pdlim5, Chmp4c, Sept7, Wiz, Dennd6a, Rhoa, PAK2, TRIM25, EGLN3, CREM, CCL16, BPIFA1, AHNAK2, TNFRSF1B, AMOTL2, ABHD10, |
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Clinically associated variants from ClinVar. |
| Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
| Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
| MKNK1 | BLCA | chr1 | 47024330 | 47024330 | G | A | Missense_Mutation | p.P439S | 3 |
| MKNK1 | ESCA | chr1 | 47027176 | 47027176 | C | T | Missense_Mutation | p.V368I | 3 |
| MKNK1 | LIHC | chr1 | 47028365 | 47028365 | C | T | Missense_Mutation | 3 | |
| MKNK1 | HNSC | chr1 | 47046281 | 47046281 | G | A | Missense_Mutation | p.S52F | 3 |
| MKNK1 | LIHC | chr1 | 47028365 | 47028365 | C | T | Missense_Mutation | p.A307T | 3 |
| MKNK1 | UCEC | chr1 | 47027214 | 47027214 | A | G | Missense_Mutation | p.L355P | 3 |
| MKNK1 | SKCM | chr1 | 47042299 | 47042299 | G | A | Missense_Mutation | p.R88W | 3 |
| MKNK1 | UCEC | chr1 | 47059838 | 47059838 | A | C | RNA | NULL | 2 |
| MKNK1 | STAD | chr1 | 47027233 | 47027233 | C | A | Missense_Mutation | p.D349Y | 2 |
| MKNK1 | LGG | chr1 | 47024299 | 47024299 | G | A | Missense_Mutation | 2 | |
| MKNK1 | LUAD | chr1 | 47028476 | 47028476 | C | A | Missense_Mutation | p.V270F | 2 |
| MKNK1 | BLCA | chr1 | 47024307 | 47024307 | C | T | Silent | p.R446R | 2 |
| MKNK1 | ESCA | chr1 | 47027176 | 47027176 | C | T | Missense_Mutation | 2 | |
| MKNK1 | ACC | chr1 | 47028362 | 47028362 | C | T | Missense_Mutation | p.D308N | 2 |
| MKNK1 | KIRC | chr1 | 47028508 | 47028508 | G | C | Missense_Mutation | p.S259C | 2 |
| MKNK1 | THYM | chr1 | 47028358 | 47028358 | C | T | Missense_Mutation | p.C309Y | 2 |
| MKNK1 | LIHC | chr1 | 47030714 | 47030714 | G | - | Splice_Site | p.P256_splice | 2 |
| MKNK1 | SKCM | chr1 | 47024335 | 47024335 | G | A | Missense_Mutation | p.S437F | 2 |
| MKNK1 | SKCM | chr1 | 47048920 | 47048920 | G | A | Missense_Mutation | p.S39F | 2 |
| MKNK1 | STAD | chr1 | 47024441 | 47024441 | C | T | Missense_Mutation | 2 | |
| MKNK1 | CESC | chr1 | 47059806 | 47059806 | G | C | Missense_Mutation | 2 | |
| MKNK1 | UCEC | chr1 | 47025946 | 47025946 | C | T | Missense_Mutation | p.A378T | 2 |
| MKNK1 | LUAD | chr1 | 47030775 | 47030775 | C | T | Missense_Mutation | p.G236S | 2 |
| MKNK1 | STAD | chr1 | 47024441 | 47024441 | C | T | Missense_Mutation | p.A402T | 2 |
| MKNK1 | CESC | chr1 | 47059806 | 47059806 | G | C | Missense_Mutation | p.Q5E | 2 |
| MKNK1 | UCEC | chr1 | 47042321 | 47042321 | G | A | Missense_Mutation | p.S10L | 2 |
| MKNK1 | STAD | chr1 | 47024370 | 47024370 | C | A | Missense_Mutation | p.E425D | 2 |
| MKNK1 | LGG | chr1 | 47030791 | 47030791 | G | T | Silent | p.I230I | 1 |
| MKNK1 | SKCM | chr1 | 47046283 | 47046283 | G | A | Silent | p.T51T | 1 |
| MKNK1 | BLCA | chr1 | 47025942 | 47025942 | G | A | Missense_Mutation | 1 | |
| MKNK1 | LUAD | chr1 | 47024441 | 47024441 | C | G | Missense_Mutation | p.A402P | 1 |
| MKNK1 | COAD | chr1 | 47046212 | 47046212 | T | C | Missense_Mutation | p.Y75C | 1 |
| MKNK1 | SARC | chr1 | 47037813 | 47037813 | G | T | Missense_Mutation | 1 | |
| MKNK1 | SKCM | chr1 | 47027272 | 47027272 | G | A | Missense_Mutation | p.P336S | 1 |
| MKNK1 | STAD | chr1 | 47046273 | 47046273 | G | A | Missense_Mutation | p.L55F | 1 |
| MKNK1 | SARC | chr1 | 47059849 | 47059849 | G | T | Missense_Mutation | 1 | |
| MKNK1 | LGG | chr1 | 47030791 | 47030791 | G | T | Silent | 1 | |
| MKNK1 | SKCM | chr1 | 47042306 | 47042306 | C | T | Missense_Mutation | p.G15D | 1 |
| MKNK1 | LUAD | chr1 | 47037739 | 47037739 | G | C | Silent | p.T163T | 1 |
| MKNK1 | STAD | chr1 | 47030770 | 47030770 | A | G | Silent | p.S237S | 1 |
| MKNK1 | SARC | chr1 | 47028460 | 47028460 | G | T | Missense_Mutation | 1 | |
| MKNK1 | SKCM | chr1 | 47027158 | 47027158 | C | T | Missense_Mutation | p.V374M | 1 |
| MKNK1 | BLCA | chr1 | 47024297 | 47024297 | G | C | Missense_Mutation | p.L450V | 1 |
| MKNK1 | LUAD | chr1 | 47040664 | 47040664 | C | T | Missense_Mutation | p.E115K | 1 |
| MKNK1 | THYM | chr1 | 47046238 | 47046238 | G | A | Silent | 1 | |
| MKNK1 | HNSC | chr1 | 47046281 | 47046281 | G | A | Missense_Mutation | 1 | |
| MKNK1 | SARC | chr1 | 47030724 | 47030724 | G | T | Missense_Mutation | 1 | |
| MKNK1 | LIHC | chr1 | 47037757 | 47037757 | G | T | Silent | 1 | |
| MKNK1 | BLCA | chr1 | 47040641 | 47040641 | C | A | Missense_Mutation | p.L122F | 1 |
| MKNK1 | OV | chr1 | 46821527 | 46821527 | C | A | Silent | p.R32 | 1 |
| MKNK1 | SARC | chr1 | 47051606 | 47051606 | G | A | Silent | p.V25 | 1 |
| MKNK1 | THYM | chr1 | 47028358 | 47028358 | C | T | Missense_Mutation | 1 | |
| MKNK1 | LIHC | chr1 | 47048993 | 47048993 | T | G | Missense_Mutation | p.S15R | 1 |
| MKNK1 | BLCA | chr1 | 47028503 | 47028503 | C | T | Missense_Mutation | p.E261K | 1 |
| MKNK1 | OV | chr1 | 46806722 | 46806722 | A | G | Silent | p.L218 | 1 |
| MKNK1 | HNSC | chr1 | 47025908 | 47025908 | C | T | Silent | p.Q390Q | 1 |
| MKNK1 | SKCM | chr1 | 47042306 | 47042306 | C | T | Silent | p.G85G | 1 |
| MKNK1 | THYM | chr1 | 47046238 | 47046238 | G | A | Silent | p.A66A | 1 |
| MKNK1 | BLCA | chr1 | 47025942 | 47025942 | G | A | Missense_Mutation | p.P379L | 1 |
| MKNK1 | OV | chr1 | 46813221 | 46813221 | C | G | Missense_Mutation | p.E125Q | 1 |
| MKNK1 | SKCM | chr1 | 47034134 | 47034134 | A | C | Missense_Mutation | p.L177W | 1 |
| MKNK1 | BLCA | chr1 | 47024330 | 47024330 | G | A | Missense_Mutation | 1 | |
| MKNK1 | BLCA | chr1 | 47024369 | 47024369 | C | - | Frame_Shift_Del | p.A426fs | 1 |
| MKNK1 | OV | chr1 | 47051647 | 47051647 | C | C | Splice_Site | e1-1 | 1 |
| MKNK1 | LGG | chr1 | 47024299 | 47024299 | G | A | Missense_Mutation | p.A408V | 1 |
| MKNK1 | BLCA | chr1 | 47024307 | 47024307 | C | T | Silent | 1 | |
| MKNK1 | LIHC | chr1 | 47024268 | 47024268 | C | - | Frame_Shift_Del | p.R459fs | 1 |
| MKNK1 | PAAD | chr1 | 47030758 | 47030758 | C | A | Silent | 1 | |
| MKNK1 | LGG | chr1 | 47024299 | 47024299 | G | A | Missense_Mutation | p.A449V | 1 |
| MKNK1 | BLCA | chr1 | 47024369 | 47024369 | C | - | Frame_Shift_Del | 1 | |
| MKNK1 | PAAD | chr1 | 47024308 | 47024308 | C | T | Missense_Mutation | 1 | |
| MKNK1 | LGG | chr1 | 47024399 | 47024399 | C | T | Missense_Mutation | p.E416K | 1 |
| MKNK1 | SKCM | chr1 | 47034134 | 47034134 | A | C | Missense_Mutation | p.L218W | 1 |
| MKNK1 | BLCA | chr1 | 47028503 | 47028503 | C | T | Missense_Mutation | 1 | |
| MKNK1 | LUAD | chr1 | 47037778 | 47037778 | C | G | Silent | p.V150V | 1 |
| MKNK1 | COAD | chr1 | 47042283 | 47042283 | C | T | Missense_Mutation | p.R93Q | 1 |
| MKNK1 | READ | chr1 | 47046209 | 47046209 | G | T | Missense_Mutation | p.A76D | 1 |
Copy number variation (CNV) of MKNK1 * Click on the image to open the original image in a new window. |
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Fusion gene breakpoints (product of the structural variants (SVs)) across MKNK1 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Fusion genes with this translation factor from FusionGDB2.0. |
| FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 60839 | LUAD | TCGA-55-8506-01A | MKNK1 | chr1 | 47069857 | - | ATPAF1 | chr1 | 47118300 | - |
| 60839 | LUAD | TCGA-55-8506-01A | MKNK1 | chr1 | 47069899 | - | ATPAF1 | chr1 | 47118300 | - |
| 60839 | OV | TCGA-13-0893-01B | MKNK1 | chr1 | 47082383 | - | ATPAF1 | chr1 | 47131036 | - |
| 60839 | OV | TCGA-24-1428 | MKNK1 | chr1 | 47059784 | - | ATPAF1 | chr1 | 47110928 | - |
| 92208 | OV | TCGA-13-0893-01B | MKNK1 | chr1 | 47082383 | - | EFCAB14 | chr1 | 47131036 | - |
| 92208 | UCEC | TCGA-KP-A3W4-01A | MKNK1 | chr1 | 47082383 | - | EFCAB14 | chr1 | 47182115 | - |
| 54098 | N/A | BG898608 | MKNK1 | chr1 | 47023089 | - | MKNK1-AS1 | chr1 | 47023171 | + |
| 71598 | N/A | BM151930 | PSD3 | chr8 | 18793632 | - | MKNK1 | chr1 | 47063141 | + |
| 71598 | SARC | TCGA-DX-AB2O-01A | RABIF | chr1 | 202858101 | - | MKNK1 | chr1 | 47059952 | - |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
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| Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
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| Cancer type | Translation factor | pval | adj.p |
| SARC | MKNK1 | 0.00761050940955113 | 0.21 |
| LUAD | MKNK1 | 0.0377613283984948 | 1 |
| LIHC | MKNK1 | 0.0485192436426276 | 1 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
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| Cancer type | Translation factor | pval | adj.p |
| GBM | MKNK1 | 0.0355976892697527 | 1 |
| LGG | MKNK1 | 0.0212539517282568 | 0.66 |
| BRCA | MKNK1 | 0.00264765387832764 | 0.085 |
| THYM | MKNK1 | 0.000102138717709065 | 0.0034 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
| UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
| Disease ID | Disease Name | # PubMeds | Disease source |
| C0029231 | Organic Mental Disorders, Substance-Induced | 1 | CTD_human |
| C0038580 | Substance Dependence | 1 | CTD_human |
| C0740858 | Substance abuse problem | 1 | CTD_human |