|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ZCCHC17-UBXN4 (FusionGDB2 ID:100660) |
Fusion Gene Summary for ZCCHC17-UBXN4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZCCHC17-UBXN4 | Fusion gene ID: 100660 | Hgene | Tgene | Gene symbol | ZCCHC17 | UBXN4 | Gene ID | 51538 | 23190 |
Gene name | zinc finger CCHC-type containing 17 | UBX domain protein 4 | |
Synonyms | HSPC251|PS1D|pNO40 | UBXD2|UBXDC1|erasin | |
Cytomap | 1p35.2 | 2q21.3 | |
Type of gene | protein-coding | protein-coding | |
Description | nucleolar protein of 40 kDanucleolar protein 40pnn-interacting nucleolar proteinputative S1 RNA binding domain proteinzinc finger CCHC domain-containing protein 17zinc finger, CCHC domain containing 17 | UBX domain-containing protein 4UBX domain containing 2UBX domain-containing 1UBX domain-containing protein 2 | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000479629, ENST00000344147, ENST00000373714, ENST00000422613, ENST00000546109, | ENST00000272638, ENST00000490163, | |
Fusion gene scores | * DoF score | 14 X 8 X 6=672 | 9 X 10 X 3=270 |
# samples | 16 | 11 | |
** MAII score | log2(16/672*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/270*10)=-1.29545588352617 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ZCCHC17 [Title/Abstract] AND UBXN4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ZCCHC17(31792013)-UBXN4(136505837), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across ZCCHC17 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across UBXN4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-HU-A4GY-01A | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
Top |
Fusion Gene ORF analysis for ZCCHC17-UBXN4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000479629 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
3UTR-intron | ENST00000479629 | ENST00000490163 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
5CDS-intron | ENST00000344147 | ENST00000490163 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
5CDS-intron | ENST00000373714 | ENST00000490163 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
5CDS-intron | ENST00000422613 | ENST00000490163 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
5CDS-intron | ENST00000546109 | ENST00000490163 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
In-frame | ENST00000344147 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
In-frame | ENST00000373714 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
In-frame | ENST00000422613 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
In-frame | ENST00000546109 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000344147 | ZCCHC17 | chr1 | 31792013 | + | ENST00000272638 | UBXN4 | chr2 | 136505837 | + | 3873 | 260 | 136 | 1704 | 522 |
ENST00000373714 | ZCCHC17 | chr1 | 31792013 | + | ENST00000272638 | UBXN4 | chr2 | 136505837 | + | 3998 | 385 | 153 | 1829 | 558 |
ENST00000546109 | ZCCHC17 | chr1 | 31792013 | + | ENST00000272638 | UBXN4 | chr2 | 136505837 | + | 3906 | 293 | 115 | 1737 | 540 |
ENST00000422613 | ZCCHC17 | chr1 | 31792013 | + | ENST00000272638 | UBXN4 | chr2 | 136505837 | + | 3711 | 98 | 46 | 1542 | 498 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000344147 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + | 0.000244563 | 0.99975544 |
ENST00000373714 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + | 0.000260657 | 0.99973935 |
ENST00000546109 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + | 0.000122218 | 0.9998778 |
ENST00000422613 | ENST00000272638 | ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505837 | + | 0.00039673 | 0.99960333 |
Top |
Fusion Genomic Features for ZCCHC17-UBXN4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505836 | + | 7.61E-07 | 0.9999993 |
ZCCHC17 | chr1 | 31792013 | + | UBXN4 | chr2 | 136505836 | + | 7.61E-07 | 0.9999993 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for ZCCHC17-UBXN4 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:31792013/chr2:136505837) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | UBXN4 | chr1:31792013 | chr2:136505837 | ENST00000272638 | 0 | 13 | 315_393 | 27 | 509.0 | Domain | UBX | |
Tgene | UBXN4 | chr1:31792013 | chr2:136505837 | ENST00000272638 | 0 | 13 | 414_434 | 27 | 509.0 | Intramembrane | Ontology_term=ECO:0000255 | |
Tgene | UBXN4 | chr1:31792013 | chr2:136505837 | ENST00000272638 | 0 | 13 | 435_508 | 27 | 509.0 | Topological domain | Cytoplasmic |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000344147 | + | 3 | 8 | 110_113 | 41 | 242.0 | Compositional bias | Note=Poly-Arg |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000344147 | + | 3 | 8 | 161_167 | 41 | 242.0 | Compositional bias | Note=Poly-Glu |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000344147 | + | 3 | 8 | 185_240 | 41 | 242.0 | Compositional bias | Note=Lys-rich |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000373714 | + | 3 | 8 | 110_113 | 41 | 242.0 | Compositional bias | Note=Poly-Arg |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000373714 | + | 3 | 8 | 161_167 | 41 | 242.0 | Compositional bias | Note=Poly-Glu |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000373714 | + | 3 | 8 | 185_240 | 41 | 242.0 | Compositional bias | Note=Lys-rich |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000344147 | + | 3 | 8 | 16_88 | 41 | 242.0 | Domain | S1 motif |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000373714 | + | 3 | 8 | 16_88 | 41 | 242.0 | Domain | S1 motif |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000344147 | + | 3 | 8 | 131_148 | 41 | 242.0 | Zinc finger | CCHC-type |
Hgene | ZCCHC17 | chr1:31792013 | chr2:136505837 | ENST00000373714 | + | 3 | 8 | 131_148 | 41 | 242.0 | Zinc finger | CCHC-type |
Tgene | UBXN4 | chr1:31792013 | chr2:136505837 | ENST00000272638 | 0 | 13 | 1_413 | 27 | 509.0 | Topological domain | Cytoplasmic |
Top |
Fusion Gene Sequence for ZCCHC17-UBXN4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>100660_100660_1_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000344147_UBXN4_chr2_136505837_ENST00000272638_length(transcript)=3873nt_BP=260nt CTTGTGGGTGGAAACGCGCTGGCTGACTGGGGTCGGCGTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGT ATTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCT CTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTGATGATGA ACAGTCTACACAGATGGCTGCAAGTTGGGAAGATGATAAAGTTACAGAAGCATCTTCAAACAGTTTTGTTGCTATTAAAATCGATACCAA AAGTGAAGCCTGCCTACAGTTTTCACAAATCTATCCTGTAGTGTGTGTTCCATCCAGTTTCTTTATTGGAGACAGTGGAATTCCCTTGGA AGTAATAGCAGGAAGTGTTTCTGCAGATGAACTTGTTACAAGAATTCACAAGGTCCGACAGATGCATTTGCTAAAAAGTGAAACATCAGT AGCAAATGGCAGTCAGTCAGAAAGTTCAGTGTCTACTCCATCTGCGTCATTTGAACCTAACAACACTTGTGAAAACTCTCAGTCCAGAAA TGCAGAGCTTTGTGAGATACCACCCACTTCTGATACAAAGTCAGATACTGCAACAGGAGGAGAAAGTGCAGGCCATGCCACTTCCTCTCA GGAGCCTAGTGGATGCTCAGATCAGAGACCTGCAGAGGACCTCAACATCCGAGTGGAAAGACTAACAAAAAAACTTGAAGAAAGGAGAGA AGAGAAAAGAAAAGAGGAAGAACAGAGAGAAATTAAGAAGGAAATTGAGAGGAGAAAAACTGGAAAAGAAATGTTGGATTATAAAAGAAA ACAAGAAGAAGAATTAACAAAAAGAATGCTGGAGGAAAGAAACAGAGAGAAAGCAGAAGATAGGGCAGCTCGAGAACGTATAAAACAGCA GATTGCATTGGACCGTGCAGAGAGAGCTGCTCGTTTTGCAAAGACAAAGGAAGAAGTAGAGGCTGCCAAAGCTGCTGCCTTGCTAGCAAA ACAGGCAGAAATGGAAGTCAAGAGGGAATCTTATGCAAGAGAAAGAAGCACTGTTGCAAGAATTCAATTCCGTCTTCCTGATGGTTCTTC CTTTACAAATCAGTTCCCTTCTGATGCTCCTCTAGAAGAGGCAAGGCAGTTTGCTGCACAGACTGTTGGCAACACTTACGGTAATTTTTC GTTAGCAACCATGTTTCCCAGGAGGGAATTTACCAAAGAAGATTATAAAAAGAAGTTACTGGATTTGGAACTTGCCCCAAGCGCTTCGGT GGTACTGTTGCCAGCAGGAAGACCAACTGCATCCATTGTACACTCTTCCAGCGGAGACATTTGGACCTTGTTGGGAACAGTGCTTTATCC ATTCCTTGCCATCTGGAGATTAATTAGCAATTTCTTGTTTAGTAATCCGCCTCCCACACAGACTTCAGTGAGAGTAACATCGTCAGAACC CCCAAACCCTGCATCATCTAGCAAATCAGAAAAAAGGGAACCAGTGAGAAAAAGAGTGCTGGAAAAACGTGGAGACGACTTTAAAAAGGA GGGGAAAATTTATAGATTAAGGACTCAAGATGATGGTGAAGATGAAAACAACACTTGGAATGGAAATTCCACTCAACAGATGTAGTGTGA CAAGTATAATATGTGCAATAATCATTGTTTCTCTTATGATTTAATTCAACTAAAATTCTACTGGAGAAGTGGGACTGCTTTATATTTTCC AACTGGTCTATAAAATGTCTCTTTATTCCTGCTTAGTGGGTGTGGGTTGAAGGTGTTTAACTCAGAAAAGTAAAGACAGGAAATAACTCT CTGCTAGGTCCTTGCTTATATGGCAACCACTGCTAGAACCCTAAAAGAACCAAAAATCTGCCACAGCCTGCCTCCATCAGCTTCTTATTT AGTATTTCATATGCCCATTAGCCCTATGCTTCAGATGACACGTTTTGTTTAGAGCTACTTTGCTCCAAGACTCTTAAGCCCAAAGTAACT GGTATGTCACTGAGTAACTTGACTCGGTGTCAGAGCATTTTAACTAGCCACTCAGATGAGAATTTATGTTTAACTTCTCTTTTTACTCAT CAGCTGCAAGCAAAATCTTGTAGTTTTTAATCTTAAACACTGAATAAAAAAACTTTCCCCTAAATTGGAATGATCTTAGTTTTGCTTTGA GTTTTGTTATCTAGCATCTTTTTGTTGCACAGGGCTCTATTGAGGTCCTATGTCTCTGATTTTTTTTTTTCCCCAGTATTGCCCTGGAGC TGTCTCTGGAAAGTAGCTGGCGAGGTTACCTTAACTATCACTGAAGAAAGAAATTTTCTGACACACTGATGGCATGTGACTTGTCTCCTA AGTCAGTGAGGCATCACTTTGTTTGCATAAAGTATACGGTTTGTTAAGGCCTTTGTTCTTGTGAGATGCAAAACAGCTGCTAGTCTGCAA CCTAGTTTTCCCTCTCACCTTTAACTGACGTTTTGTCCTCAATAATTACACAAGGACCTAGAGTACCTATAGGACAAAAAGTATAGAATA AAAATATGCCTTTAGTCATTTGGTTTTTCTTAAAAAGTTGAGATTCTTAATCTGACTTACATGTTACTTTATCCGTATGTCTTTGTTAGT GGAGACCGCTAAACTAATGATGTTTGAAAACAGTTCCTCTGTTTTAGATTGGAAGATAGCACTCTAGAGTGGACATACGGAAAGACTGTG ACTTTATTTTGTAATGGGAGGAAGAAATTTTCTCAGAGCAAACTTTCTATTTTTTACCTGTGAAATAACAGTGACTTTTTAAAATGGTGA CAGTGTTGGCAAGGAAACAGCAACACAGGCTGCGCTGTTGGTAGGAGTGAAAACCAGTATAATTCTTCTGAAAAACATTTATCAGAAACT TAAAATATTTCATACCGTTTGATCCAGTAGCTTCTTCTAAATCATAAATGCAGACAATGTTTAGGTAAAGACATACTCATTAAGTGTTAT TTATTTTACTCAAGAACTGGAAACCAACTAAATGCCTTCTATAGAAGTAATTTTTGATGAGGAGAAATGGTACAATACTAATTAACAACT TGGTTTAACATGTTTACTGAGCATCTGTTAAGTGTTGGGGGAAAAAGCAGCAGGATCCAGAGCTATAGGTACAGTGTGATCTCAGCTTTG CAAACACATTTTCTACATAGATAGTACTAGGTATTAATAGATATGTAAAGAAAGAAATCACACCATTAATAATGGTAAGATTGGTTTATG TGATTTTAGTGGTATTTTTGGCACCCTTATATATGTTTTCCAAACTTTCAGCAGTGATATTATTTCCATAACTTAAAAAGTGAGTTTGAA AAAGAAAATCTCCAGCAAGCATCTCATTTAAATAAAGGTTTGTCATCTTTAAAAATACAGCAATATGTGACTTTTTAAAAAAGCTGTCAA ATAGGTGTGACCCTACTAATAATTATTAGAAATACATTTAAAAACATCGAGTACCTCAAGTCAGTTTGCCTTGAAAAATATCAAATATAA CTCTTAGAGAAATGTACATAAAAGAATGCTTCGTAATTTTGGAGTAGGAGGTTCCCTCCTCAATTTTGTATTTTTAAAAGTACATGGTAA AAAAAAAAATTCACAACAGTATATAAGGCTGTAAAATGAGAATTCTGCCCCCTCACCTCTTACCCCAGTACTATTCTCCAGAGGTAATCT ATTAACAATTTCTTATGTAATTTTCAGAAAATTTGTATGCGTATATAAGCAAATATGTAATCTTTATTTTTTAAATAAATGGGATCATAT >100660_100660_1_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000344147_UBXN4_chr2_136505837_ENST00000272638_length(amino acids)=522AA_BP=41 MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGDDEQSTQMAASWEDDKVTEASSNSFVAIKIDTKSEACLQFSQIYPVVC VPSSFFIGDSGIPLEVIAGSVSADELVTRIHKVRQMHLLKSETSVANGSQSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSD TATGGESAGHATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNR EKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKAAALLAKQAEMEVKRESYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEAR QFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVLLPAGRPTASIVHSSSGDIWTLLGTVLYPFLAIWRLISNFLFSN -------------------------------------------------------------- >100660_100660_2_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000373714_UBXN4_chr2_136505837_ENST00000272638_length(transcript)=3998nt_BP=385nt ACGCGCTGGCTGACTGGGGTCGGCGTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGTACGTATGAGGAAGAACGGGG TGGGTGGCTGCCTGAGTCTGGAGGCGACGCCTCGGTTGTGCAGTCTGAACCTGCCCTTCTCAGCTGAGGGTGCTGACAGCAAGGGGTGGG AGGCGGGCCCCGAGTCCCCAGCTGTGGACACTTGTATTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGAATATTAAGGATGAATTCA GGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTATGGTGACAGACTATGGGGCCTTTATC AAAATCCCAGGCTGTCGGAAGCAAGGTGATGATGAACAGTCTACACAGATGGCTGCAAGTTGGGAAGATGATAAAGTTACAGAAGCATCT TCAAACAGTTTTGTTGCTATTAAAATCGATACCAAAAGTGAAGCCTGCCTACAGTTTTCACAAATCTATCCTGTAGTGTGTGTTCCATCC AGTTTCTTTATTGGAGACAGTGGAATTCCCTTGGAAGTAATAGCAGGAAGTGTTTCTGCAGATGAACTTGTTACAAGAATTCACAAGGTC CGACAGATGCATTTGCTAAAAAGTGAAACATCAGTAGCAAATGGCAGTCAGTCAGAAAGTTCAGTGTCTACTCCATCTGCGTCATTTGAA CCTAACAACACTTGTGAAAACTCTCAGTCCAGAAATGCAGAGCTTTGTGAGATACCACCCACTTCTGATACAAAGTCAGATACTGCAACA GGAGGAGAAAGTGCAGGCCATGCCACTTCCTCTCAGGAGCCTAGTGGATGCTCAGATCAGAGACCTGCAGAGGACCTCAACATCCGAGTG GAAAGACTAACAAAAAAACTTGAAGAAAGGAGAGAAGAGAAAAGAAAAGAGGAAGAACAGAGAGAAATTAAGAAGGAAATTGAGAGGAGA AAAACTGGAAAAGAAATGTTGGATTATAAAAGAAAACAAGAAGAAGAATTAACAAAAAGAATGCTGGAGGAAAGAAACAGAGAGAAAGCA GAAGATAGGGCAGCTCGAGAACGTATAAAACAGCAGATTGCATTGGACCGTGCAGAGAGAGCTGCTCGTTTTGCAAAGACAAAGGAAGAA GTAGAGGCTGCCAAAGCTGCTGCCTTGCTAGCAAAACAGGCAGAAATGGAAGTCAAGAGGGAATCTTATGCAAGAGAAAGAAGCACTGTT GCAAGAATTCAATTCCGTCTTCCTGATGGTTCTTCCTTTACAAATCAGTTCCCTTCTGATGCTCCTCTAGAAGAGGCAAGGCAGTTTGCT GCACAGACTGTTGGCAACACTTACGGTAATTTTTCGTTAGCAACCATGTTTCCCAGGAGGGAATTTACCAAAGAAGATTATAAAAAGAAG TTACTGGATTTGGAACTTGCCCCAAGCGCTTCGGTGGTACTGTTGCCAGCAGGAAGACCAACTGCATCCATTGTACACTCTTCCAGCGGA GACATTTGGACCTTGTTGGGAACAGTGCTTTATCCATTCCTTGCCATCTGGAGATTAATTAGCAATTTCTTGTTTAGTAATCCGCCTCCC ACACAGACTTCAGTGAGAGTAACATCGTCAGAACCCCCAAACCCTGCATCATCTAGCAAATCAGAAAAAAGGGAACCAGTGAGAAAAAGA GTGCTGGAAAAACGTGGAGACGACTTTAAAAAGGAGGGGAAAATTTATAGATTAAGGACTCAAGATGATGGTGAAGATGAAAACAACACT TGGAATGGAAATTCCACTCAACAGATGTAGTGTGACAAGTATAATATGTGCAATAATCATTGTTTCTCTTATGATTTAATTCAACTAAAA TTCTACTGGAGAAGTGGGACTGCTTTATATTTTCCAACTGGTCTATAAAATGTCTCTTTATTCCTGCTTAGTGGGTGTGGGTTGAAGGTG TTTAACTCAGAAAAGTAAAGACAGGAAATAACTCTCTGCTAGGTCCTTGCTTATATGGCAACCACTGCTAGAACCCTAAAAGAACCAAAA ATCTGCCACAGCCTGCCTCCATCAGCTTCTTATTTAGTATTTCATATGCCCATTAGCCCTATGCTTCAGATGACACGTTTTGTTTAGAGC TACTTTGCTCCAAGACTCTTAAGCCCAAAGTAACTGGTATGTCACTGAGTAACTTGACTCGGTGTCAGAGCATTTTAACTAGCCACTCAG ATGAGAATTTATGTTTAACTTCTCTTTTTACTCATCAGCTGCAAGCAAAATCTTGTAGTTTTTAATCTTAAACACTGAATAAAAAAACTT TCCCCTAAATTGGAATGATCTTAGTTTTGCTTTGAGTTTTGTTATCTAGCATCTTTTTGTTGCACAGGGCTCTATTGAGGTCCTATGTCT CTGATTTTTTTTTTTCCCCAGTATTGCCCTGGAGCTGTCTCTGGAAAGTAGCTGGCGAGGTTACCTTAACTATCACTGAAGAAAGAAATT TTCTGACACACTGATGGCATGTGACTTGTCTCCTAAGTCAGTGAGGCATCACTTTGTTTGCATAAAGTATACGGTTTGTTAAGGCCTTTG TTCTTGTGAGATGCAAAACAGCTGCTAGTCTGCAACCTAGTTTTCCCTCTCACCTTTAACTGACGTTTTGTCCTCAATAATTACACAAGG ACCTAGAGTACCTATAGGACAAAAAGTATAGAATAAAAATATGCCTTTAGTCATTTGGTTTTTCTTAAAAAGTTGAGATTCTTAATCTGA CTTACATGTTACTTTATCCGTATGTCTTTGTTAGTGGAGACCGCTAAACTAATGATGTTTGAAAACAGTTCCTCTGTTTTAGATTGGAAG ATAGCACTCTAGAGTGGACATACGGAAAGACTGTGACTTTATTTTGTAATGGGAGGAAGAAATTTTCTCAGAGCAAACTTTCTATTTTTT ACCTGTGAAATAACAGTGACTTTTTAAAATGGTGACAGTGTTGGCAAGGAAACAGCAACACAGGCTGCGCTGTTGGTAGGAGTGAAAACC AGTATAATTCTTCTGAAAAACATTTATCAGAAACTTAAAATATTTCATACCGTTTGATCCAGTAGCTTCTTCTAAATCATAAATGCAGAC AATGTTTAGGTAAAGACATACTCATTAAGTGTTATTTATTTTACTCAAGAACTGGAAACCAACTAAATGCCTTCTATAGAAGTAATTTTT GATGAGGAGAAATGGTACAATACTAATTAACAACTTGGTTTAACATGTTTACTGAGCATCTGTTAAGTGTTGGGGGAAAAAGCAGCAGGA TCCAGAGCTATAGGTACAGTGTGATCTCAGCTTTGCAAACACATTTTCTACATAGATAGTACTAGGTATTAATAGATATGTAAAGAAAGA AATCACACCATTAATAATGGTAAGATTGGTTTATGTGATTTTAGTGGTATTTTTGGCACCCTTATATATGTTTTCCAAACTTTCAGCAGT GATATTATTTCCATAACTTAAAAAGTGAGTTTGAAAAAGAAAATCTCCAGCAAGCATCTCATTTAAATAAAGGTTTGTCATCTTTAAAAA TACAGCAATATGTGACTTTTTAAAAAAGCTGTCAAATAGGTGTGACCCTACTAATAATTATTAGAAATACATTTAAAAACATCGAGTACC TCAAGTCAGTTTGCCTTGAAAAATATCAAATATAACTCTTAGAGAAATGTACATAAAAGAATGCTTCGTAATTTTGGAGTAGGAGGTTCC CTCCTCAATTTTGTATTTTTAAAAGTACATGGTAAAAAAAAAAATTCACAACAGTATATAAGGCTGTAAAATGAGAATTCTGCCCCCTCA CCTCTTACCCCAGTACTATTCTCCAGAGGTAATCTATTAACAATTTCTTATGTAATTTTCAGAAAATTTGTATGCGTATATAAGCAAATA >100660_100660_2_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000373714_UBXN4_chr2_136505837_ENST00000272638_length(amino acids)=558AA_BP=77 MRVLTARGGRRAPSPQLWTLVLALIEEKWRSHRILRMNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGDDEQSTQMAASW EDDKVTEASSNSFVAIKIDTKSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKVRQMHLLKSETSVANGSQSESS VSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSDTATGGESAGHATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQR EIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKAAALLAKQAEMEVKRE SYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVLLPAGRPT ASIVHSSSGDIWTLLGTVLYPFLAIWRLISNFLFSNPPPTQTSVRVTSSEPPNPASSSKSEKREPVRKRVLEKRGDDFKKEGKIYRLRTQ -------------------------------------------------------------- >100660_100660_3_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000422613_UBXN4_chr2_136505837_ENST00000272638_length(transcript)=3711nt_BP=98nt AGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGTTGCTATGGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCG GAAGCAAGGTGATGATGAACAGTCTACACAGATGGCTGCAAGTTGGGAAGATGATAAAGTTACAGAAGCATCTTCAAACAGTTTTGTTGC TATTAAAATCGATACCAAAAGTGAAGCCTGCCTACAGTTTTCACAAATCTATCCTGTAGTGTGTGTTCCATCCAGTTTCTTTATTGGAGA CAGTGGAATTCCCTTGGAAGTAATAGCAGGAAGTGTTTCTGCAGATGAACTTGTTACAAGAATTCACAAGGTCCGACAGATGCATTTGCT AAAAAGTGAAACATCAGTAGCAAATGGCAGTCAGTCAGAAAGTTCAGTGTCTACTCCATCTGCGTCATTTGAACCTAACAACACTTGTGA AAACTCTCAGTCCAGAAATGCAGAGCTTTGTGAGATACCACCCACTTCTGATACAAAGTCAGATACTGCAACAGGAGGAGAAAGTGCAGG CCATGCCACTTCCTCTCAGGAGCCTAGTGGATGCTCAGATCAGAGACCTGCAGAGGACCTCAACATCCGAGTGGAAAGACTAACAAAAAA ACTTGAAGAAAGGAGAGAAGAGAAAAGAAAAGAGGAAGAACAGAGAGAAATTAAGAAGGAAATTGAGAGGAGAAAAACTGGAAAAGAAAT GTTGGATTATAAAAGAAAACAAGAAGAAGAATTAACAAAAAGAATGCTGGAGGAAAGAAACAGAGAGAAAGCAGAAGATAGGGCAGCTCG AGAACGTATAAAACAGCAGATTGCATTGGACCGTGCAGAGAGAGCTGCTCGTTTTGCAAAGACAAAGGAAGAAGTAGAGGCTGCCAAAGC TGCTGCCTTGCTAGCAAAACAGGCAGAAATGGAAGTCAAGAGGGAATCTTATGCAAGAGAAAGAAGCACTGTTGCAAGAATTCAATTCCG TCTTCCTGATGGTTCTTCCTTTACAAATCAGTTCCCTTCTGATGCTCCTCTAGAAGAGGCAAGGCAGTTTGCTGCACAGACTGTTGGCAA CACTTACGGTAATTTTTCGTTAGCAACCATGTTTCCCAGGAGGGAATTTACCAAAGAAGATTATAAAAAGAAGTTACTGGATTTGGAACT TGCCCCAAGCGCTTCGGTGGTACTGTTGCCAGCAGGAAGACCAACTGCATCCATTGTACACTCTTCCAGCGGAGACATTTGGACCTTGTT GGGAACAGTGCTTTATCCATTCCTTGCCATCTGGAGATTAATTAGCAATTTCTTGTTTAGTAATCCGCCTCCCACACAGACTTCAGTGAG AGTAACATCGTCAGAACCCCCAAACCCTGCATCATCTAGCAAATCAGAAAAAAGGGAACCAGTGAGAAAAAGAGTGCTGGAAAAACGTGG AGACGACTTTAAAAAGGAGGGGAAAATTTATAGATTAAGGACTCAAGATGATGGTGAAGATGAAAACAACACTTGGAATGGAAATTCCAC TCAACAGATGTAGTGTGACAAGTATAATATGTGCAATAATCATTGTTTCTCTTATGATTTAATTCAACTAAAATTCTACTGGAGAAGTGG GACTGCTTTATATTTTCCAACTGGTCTATAAAATGTCTCTTTATTCCTGCTTAGTGGGTGTGGGTTGAAGGTGTTTAACTCAGAAAAGTA AAGACAGGAAATAACTCTCTGCTAGGTCCTTGCTTATATGGCAACCACTGCTAGAACCCTAAAAGAACCAAAAATCTGCCACAGCCTGCC TCCATCAGCTTCTTATTTAGTATTTCATATGCCCATTAGCCCTATGCTTCAGATGACACGTTTTGTTTAGAGCTACTTTGCTCCAAGACT CTTAAGCCCAAAGTAACTGGTATGTCACTGAGTAACTTGACTCGGTGTCAGAGCATTTTAACTAGCCACTCAGATGAGAATTTATGTTTA ACTTCTCTTTTTACTCATCAGCTGCAAGCAAAATCTTGTAGTTTTTAATCTTAAACACTGAATAAAAAAACTTTCCCCTAAATTGGAATG ATCTTAGTTTTGCTTTGAGTTTTGTTATCTAGCATCTTTTTGTTGCACAGGGCTCTATTGAGGTCCTATGTCTCTGATTTTTTTTTTTCC CCAGTATTGCCCTGGAGCTGTCTCTGGAAAGTAGCTGGCGAGGTTACCTTAACTATCACTGAAGAAAGAAATTTTCTGACACACTGATGG CATGTGACTTGTCTCCTAAGTCAGTGAGGCATCACTTTGTTTGCATAAAGTATACGGTTTGTTAAGGCCTTTGTTCTTGTGAGATGCAAA ACAGCTGCTAGTCTGCAACCTAGTTTTCCCTCTCACCTTTAACTGACGTTTTGTCCTCAATAATTACACAAGGACCTAGAGTACCTATAG GACAAAAAGTATAGAATAAAAATATGCCTTTAGTCATTTGGTTTTTCTTAAAAAGTTGAGATTCTTAATCTGACTTACATGTTACTTTAT CCGTATGTCTTTGTTAGTGGAGACCGCTAAACTAATGATGTTTGAAAACAGTTCCTCTGTTTTAGATTGGAAGATAGCACTCTAGAGTGG ACATACGGAAAGACTGTGACTTTATTTTGTAATGGGAGGAAGAAATTTTCTCAGAGCAAACTTTCTATTTTTTACCTGTGAAATAACAGT GACTTTTTAAAATGGTGACAGTGTTGGCAAGGAAACAGCAACACAGGCTGCGCTGTTGGTAGGAGTGAAAACCAGTATAATTCTTCTGAA AAACATTTATCAGAAACTTAAAATATTTCATACCGTTTGATCCAGTAGCTTCTTCTAAATCATAAATGCAGACAATGTTTAGGTAAAGAC ATACTCATTAAGTGTTATTTATTTTACTCAAGAACTGGAAACCAACTAAATGCCTTCTATAGAAGTAATTTTTGATGAGGAGAAATGGTA CAATACTAATTAACAACTTGGTTTAACATGTTTACTGAGCATCTGTTAAGTGTTGGGGGAAAAAGCAGCAGGATCCAGAGCTATAGGTAC AGTGTGATCTCAGCTTTGCAAACACATTTTCTACATAGATAGTACTAGGTATTAATAGATATGTAAAGAAAGAAATCACACCATTAATAA TGGTAAGATTGGTTTATGTGATTTTAGTGGTATTTTTGGCACCCTTATATATGTTTTCCAAACTTTCAGCAGTGATATTATTTCCATAAC TTAAAAAGTGAGTTTGAAAAAGAAAATCTCCAGCAAGCATCTCATTTAAATAAAGGTTTGTCATCTTTAAAAATACAGCAATATGTGACT TTTTAAAAAAGCTGTCAAATAGGTGTGACCCTACTAATAATTATTAGAAATACATTTAAAAACATCGAGTACCTCAAGTCAGTTTGCCTT GAAAAATATCAAATATAACTCTTAGAGAAATGTACATAAAAGAATGCTTCGTAATTTTGGAGTAGGAGGTTCCCTCCTCAATTTTGTATT TTTAAAAGTACATGGTAAAAAAAAAAATTCACAACAGTATATAAGGCTGTAAAATGAGAATTCTGCCCCCTCACCTCTTACCCCAGTACT ATTCTCCAGAGGTAATCTATTAACAATTTCTTATGTAATTTTCAGAAAATTTGTATGCGTATATAAGCAAATATGTAATCTTTATTTTTT >100660_100660_3_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000422613_UBXN4_chr2_136505837_ENST00000272638_length(amino acids)=498AA_BP=17 MVTDYGAFIKIPGCRKQGDDEQSTQMAASWEDDKVTEASSNSFVAIKIDTKSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSAD ELVTRIHKVRQMHLLKSETSVANGSQSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSDTATGGESAGHATSSQEPSGCSDQR PAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERA ARFAKTKEEVEAAKAAALLAKQAEMEVKRESYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRRE FTKEDYKKKLLDLELAPSASVVLLPAGRPTASIVHSSSGDIWTLLGTVLYPFLAIWRLISNFLFSNPPPTQTSVRVTSSEPPNPASSSKS -------------------------------------------------------------- >100660_100660_4_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000546109_UBXN4_chr2_136505837_ENST00000272638_length(transcript)=3906nt_BP=293nt GTTTAGTTCAGCGCAGCGACTCGGGGACCTGGAGCTGACGCCTAGACACTTGTATTAGCTTTAATAGAAGAGAAATGGAGGAGCCATAGA ATATTAAGGATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGTTATGGTGAAGCTGA AACAGTGCTCAAGATGAAGCAGCTAATTGAAGACACTGAAAAGAATAAAGTTTATGTTGCTATGGTGACAGACTATGGGGCCTTTATCAA AATCCCAGGCTGTCGGAAGCAAGGTGATGATGAACAGTCTACACAGATGGCTGCAAGTTGGGAAGATGATAAAGTTACAGAAGCATCTTC AAACAGTTTTGTTGCTATTAAAATCGATACCAAAAGTGAAGCCTGCCTACAGTTTTCACAAATCTATCCTGTAGTGTGTGTTCCATCCAG TTTCTTTATTGGAGACAGTGGAATTCCCTTGGAAGTAATAGCAGGAAGTGTTTCTGCAGATGAACTTGTTACAAGAATTCACAAGGTCCG ACAGATGCATTTGCTAAAAAGTGAAACATCAGTAGCAAATGGCAGTCAGTCAGAAAGTTCAGTGTCTACTCCATCTGCGTCATTTGAACC TAACAACACTTGTGAAAACTCTCAGTCCAGAAATGCAGAGCTTTGTGAGATACCACCCACTTCTGATACAAAGTCAGATACTGCAACAGG AGGAGAAAGTGCAGGCCATGCCACTTCCTCTCAGGAGCCTAGTGGATGCTCAGATCAGAGACCTGCAGAGGACCTCAACATCCGAGTGGA AAGACTAACAAAAAAACTTGAAGAAAGGAGAGAAGAGAAAAGAAAAGAGGAAGAACAGAGAGAAATTAAGAAGGAAATTGAGAGGAGAAA AACTGGAAAAGAAATGTTGGATTATAAAAGAAAACAAGAAGAAGAATTAACAAAAAGAATGCTGGAGGAAAGAAACAGAGAGAAAGCAGA AGATAGGGCAGCTCGAGAACGTATAAAACAGCAGATTGCATTGGACCGTGCAGAGAGAGCTGCTCGTTTTGCAAAGACAAAGGAAGAAGT AGAGGCTGCCAAAGCTGCTGCCTTGCTAGCAAAACAGGCAGAAATGGAAGTCAAGAGGGAATCTTATGCAAGAGAAAGAAGCACTGTTGC AAGAATTCAATTCCGTCTTCCTGATGGTTCTTCCTTTACAAATCAGTTCCCTTCTGATGCTCCTCTAGAAGAGGCAAGGCAGTTTGCTGC ACAGACTGTTGGCAACACTTACGGTAATTTTTCGTTAGCAACCATGTTTCCCAGGAGGGAATTTACCAAAGAAGATTATAAAAAGAAGTT ACTGGATTTGGAACTTGCCCCAAGCGCTTCGGTGGTACTGTTGCCAGCAGGAAGACCAACTGCATCCATTGTACACTCTTCCAGCGGAGA CATTTGGACCTTGTTGGGAACAGTGCTTTATCCATTCCTTGCCATCTGGAGATTAATTAGCAATTTCTTGTTTAGTAATCCGCCTCCCAC ACAGACTTCAGTGAGAGTAACATCGTCAGAACCCCCAAACCCTGCATCATCTAGCAAATCAGAAAAAAGGGAACCAGTGAGAAAAAGAGT GCTGGAAAAACGTGGAGACGACTTTAAAAAGGAGGGGAAAATTTATAGATTAAGGACTCAAGATGATGGTGAAGATGAAAACAACACTTG GAATGGAAATTCCACTCAACAGATGTAGTGTGACAAGTATAATATGTGCAATAATCATTGTTTCTCTTATGATTTAATTCAACTAAAATT CTACTGGAGAAGTGGGACTGCTTTATATTTTCCAACTGGTCTATAAAATGTCTCTTTATTCCTGCTTAGTGGGTGTGGGTTGAAGGTGTT TAACTCAGAAAAGTAAAGACAGGAAATAACTCTCTGCTAGGTCCTTGCTTATATGGCAACCACTGCTAGAACCCTAAAAGAACCAAAAAT CTGCCACAGCCTGCCTCCATCAGCTTCTTATTTAGTATTTCATATGCCCATTAGCCCTATGCTTCAGATGACACGTTTTGTTTAGAGCTA CTTTGCTCCAAGACTCTTAAGCCCAAAGTAACTGGTATGTCACTGAGTAACTTGACTCGGTGTCAGAGCATTTTAACTAGCCACTCAGAT GAGAATTTATGTTTAACTTCTCTTTTTACTCATCAGCTGCAAGCAAAATCTTGTAGTTTTTAATCTTAAACACTGAATAAAAAAACTTTC CCCTAAATTGGAATGATCTTAGTTTTGCTTTGAGTTTTGTTATCTAGCATCTTTTTGTTGCACAGGGCTCTATTGAGGTCCTATGTCTCT GATTTTTTTTTTTCCCCAGTATTGCCCTGGAGCTGTCTCTGGAAAGTAGCTGGCGAGGTTACCTTAACTATCACTGAAGAAAGAAATTTT CTGACACACTGATGGCATGTGACTTGTCTCCTAAGTCAGTGAGGCATCACTTTGTTTGCATAAAGTATACGGTTTGTTAAGGCCTTTGTT CTTGTGAGATGCAAAACAGCTGCTAGTCTGCAACCTAGTTTTCCCTCTCACCTTTAACTGACGTTTTGTCCTCAATAATTACACAAGGAC CTAGAGTACCTATAGGACAAAAAGTATAGAATAAAAATATGCCTTTAGTCATTTGGTTTTTCTTAAAAAGTTGAGATTCTTAATCTGACT TACATGTTACTTTATCCGTATGTCTTTGTTAGTGGAGACCGCTAAACTAATGATGTTTGAAAACAGTTCCTCTGTTTTAGATTGGAAGAT AGCACTCTAGAGTGGACATACGGAAAGACTGTGACTTTATTTTGTAATGGGAGGAAGAAATTTTCTCAGAGCAAACTTTCTATTTTTTAC CTGTGAAATAACAGTGACTTTTTAAAATGGTGACAGTGTTGGCAAGGAAACAGCAACACAGGCTGCGCTGTTGGTAGGAGTGAAAACCAG TATAATTCTTCTGAAAAACATTTATCAGAAACTTAAAATATTTCATACCGTTTGATCCAGTAGCTTCTTCTAAATCATAAATGCAGACAA TGTTTAGGTAAAGACATACTCATTAAGTGTTATTTATTTTACTCAAGAACTGGAAACCAACTAAATGCCTTCTATAGAAGTAATTTTTGA TGAGGAGAAATGGTACAATACTAATTAACAACTTGGTTTAACATGTTTACTGAGCATCTGTTAAGTGTTGGGGGAAAAAGCAGCAGGATC CAGAGCTATAGGTACAGTGTGATCTCAGCTTTGCAAACACATTTTCTACATAGATAGTACTAGGTATTAATAGATATGTAAAGAAAGAAA TCACACCATTAATAATGGTAAGATTGGTTTATGTGATTTTAGTGGTATTTTTGGCACCCTTATATATGTTTTCCAAACTTTCAGCAGTGA TATTATTTCCATAACTTAAAAAGTGAGTTTGAAAAAGAAAATCTCCAGCAAGCATCTCATTTAAATAAAGGTTTGTCATCTTTAAAAATA CAGCAATATGTGACTTTTTAAAAAAGCTGTCAAATAGGTGTGACCCTACTAATAATTATTAGAAATACATTTAAAAACATCGAGTACCTC AAGTCAGTTTGCCTTGAAAAATATCAAATATAACTCTTAGAGAAATGTACATAAAAGAATGCTTCGTAATTTTGGAGTAGGAGGTTCCCT CCTCAATTTTGTATTTTTAAAAGTACATGGTAAAAAAAAAAATTCACAACAGTATATAAGGCTGTAAAATGAGAATTCTGCCCCCTCACC TCTTACCCCAGTACTATTCTCCAGAGGTAATCTATTAACAATTTCTTATGTAATTTTCAGAAAATTTGTATGCGTATATAAGCAAATATG >100660_100660_4_ZCCHC17-UBXN4_ZCCHC17_chr1_31792013_ENST00000546109_UBXN4_chr2_136505837_ENST00000272638_length(amino acids)=540AA_BP=59 MRPWKTCLLSTLFSKESYGEAETVLKMKQLIEDTEKNKVYVAMVTDYGAFIKIPGCRKQGDDEQSTQMAASWEDDKVTEASSNSFVAIKI DTKSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKVRQMHLLKSETSVANGSQSESSVSTPSASFEPNNTCENSQ SRNAELCEIPPTSDTKSDTATGGESAGHATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEMLDY KRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKAAALLAKQAEMEVKRESYARERSTVARIQFRLPD GSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVLLPAGRPTASIVHSSSGDIWTLLGTV LYPFLAIWRLISNFLFSNPPPTQTSVRVTSSEPPNPASSSKSEKREPVRKRVLEKRGDDFKKEGKIYRLRTQDDGEDENNTWNGNSTQQM -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for ZCCHC17-UBXN4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | UBXN4 | chr1:31792013 | chr2:136505837 | ENST00000272638 | 0 | 13 | 1_200 | 27.333333333333332 | 509.0 | UBQLN1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for ZCCHC17-UBXN4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for ZCCHC17-UBXN4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |