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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ZNF587B-NEK9 (FusionGDB2 ID:102469)

Fusion Gene Summary for ZNF587B-NEK9

check button Fusion gene summary
Fusion gene informationFusion gene name: ZNF587B-NEK9
Fusion gene ID: 102469
HgeneTgene
Gene symbol

ZNF587B

NEK9

Gene ID

100293516

91754

Gene namezinc finger protein 587BNIMA related kinase 9
Synonyms-APUG|LCCS10|NC|NERCC|NERCC1
Cytomap

19q13.43

14q24.3

Type of geneprotein-codingprotein-coding
Descriptionzinc finger protein 587Bserine/threonine-protein kinase Nek9NIMA (never in mitosis gene a)- related kinase 9nercc1 kinasenimA-related protein kinase 9
Modification date2020031320200320
UniProtAcc.

Q8TD19

Ensembl transtripts involved in fusion geneENST00000316462, ENST00000442832, 
ENST00000594901, 
ENST00000555763, 
ENST00000238616, 
Fusion gene scores* DoF score12 X 7 X 7=5884 X 7 X 3=84
# samples 147
** MAII scorelog2(14/588*10)=-2.0703893278914
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(7/84*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ZNF587B [Title/Abstract] AND NEK9 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointZNF587B(58350517)-NEK9(75573405), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across ZNF587B (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across NEK9 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-BH-A18SZNF587Bchr19

58350517

+NEK9chr14

75573405

-


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Fusion Gene ORF analysis for ZNF587B-NEK9

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000316462ENST00000555763ZNF587Bchr19

58350517

+NEK9chr14

75573405

-
5CDS-intronENST00000442832ENST00000555763ZNF587Bchr19

58350517

+NEK9chr14

75573405

-
5CDS-intronENST00000594901ENST00000555763ZNF587Bchr19

58350517

+NEK9chr14

75573405

-
In-frameENST00000316462ENST00000238616ZNF587Bchr19

58350517

+NEK9chr14

75573405

-
In-frameENST00000442832ENST00000238616ZNF587Bchr19

58350517

+NEK9chr14

75573405

-
In-frameENST00000594901ENST00000238616ZNF587Bchr19

58350517

+NEK9chr14

75573405

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000316462ZNF587Bchr1958350517+ENST00000238616NEK9chr1475573405-44003421251954609
ENST00000442832ZNF587Bchr1958350517+ENST00000238616NEK9chr1475573405-44553971142009631
ENST00000594901ZNF587Bchr1958350517+ENST00000238616NEK9chr1475573405-4437379961991631

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000316462ENST00000238616ZNF587Bchr1958350517+NEK9chr1475573405-0.0025755510.9974245
ENST00000442832ENST00000238616ZNF587Bchr1958350517+NEK9chr1475573405-0.002537080.99746287
ENST00000594901ENST00000238616ZNF587Bchr1958350517+NEK9chr1475573405-0.0026678680.9973321

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Fusion Genomic Features for ZNF587B-NEK9


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ZNF587B-NEK9


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr19:58350517/chr14:75573405)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.NEK9

Q8TD19

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Pleiotropic regulator of mitotic progression, participating in the control of spindle dynamics and chromosome separation. Phosphorylates different histones, myelin basic protein, beta-casein, and BICD2. Phosphorylates histone H3 on serine and threonine residues and beta-casein on serine residues. Important for G1/S transition and S phase progression. Phosphorylates NEK6 and NEK7 and stimulates their activity by releasing the autoinhibitory functions of Tyr-108 and Tyr-97 respectively. {ECO:0000269|PubMed:12840024, ECO:0000269|PubMed:14660563, ECO:0000269|PubMed:19941817}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022892_939442980.0Coiled coilOntology_term=ECO:0000255
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022752_760442980.0Compositional biasNote=Poly-Gly
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022765_888442980.0Compositional biasNote=Pro/Ser/Thr-rich
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022445_498442980.0RepeatNote=RCC1 2
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022499_550442980.0RepeatNote=RCC1 3
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022551_615442980.0RepeatNote=RCC1 4
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022616_668442980.0RepeatNote=RCC1 5
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022669_726442980.0RepeatNote=RCC1 6

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+2415_9154403.0DomainKRAB
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+24120_14254403.0Zinc fingerC2H2-type 2%3B degenerate
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+24242_26454403.0Zinc fingerC2H2-type 3
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+24270_29254403.0Zinc fingerC2H2-type 4
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+24298_32054403.0Zinc fingerC2H2-type 5
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+24326_34854403.0Zinc fingerC2H2-type 6
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+24354_38354403.0Zinc fingerC2H2-type 7
HgeneZNF587Bchr19:58350517chr14:75573405ENST00000442832+2492_11454403.0Zinc fingerC2H2-type 1
TgeneNEK9chr19:58350517chr14:75573405ENST00000238616102252_308442980.0DomainProtein kinase
TgeneNEK9chr19:58350517chr14:75573405ENST00000238616102258_66442980.0Nucleotide bindingATP
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022388_444442980.0RepeatNote=RCC1 1


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Fusion Gene Sequence for ZNF587B-NEK9


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>102469_102469_1_ZNF587B-NEK9_ZNF587B_chr19_58350517_ENST00000316462_NEK9_chr14_75573405_ENST00000238616_length(transcript)=4400nt_BP=342nt
GTAGCGGCCACGTTGATCTGCGATACGCGTGTTTGCCCAGTGAGTGGCCCCGGACTGCTACGTGGGACTGCGGTGAATGAACCCAGAAGG
TGGAGAGGAACCGTTCTCGGTGCACAGAGGCGGCTCTGCAGCCCGGTGAGGGCGCCTGCTGCTCCCGGGCAGTGCTTTCCCCAAGTAGTC
CGATGGCTGCGGCTGCGCCGAGGCGCCCTACTCAGGGCACAGTGACTTTTGAAGACGTGGCTGTGAAATTTACCCAGGAGGAATGGAATC
TCCTTAGTGAGGCTCAGAGATGCCTGTACCGTGATGTGACTCTGGAGAACCTGGCACTTATGTCCTCCCTGGATGAGGGTCAGCTCTATG
CCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCTTCCTCA
GCAATCCAGTGGAGCAGGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGCTGTGGCGAAT
ATGGACGACTGGGTTTGGATTCAGAAGAGGATTATTATACACCACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGTTGCAGTTCAAT
GTGGCTGTGATGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGT
GCATGTCGGGAATTATCAACCATGAAGCATACCATGAAGTTCCCTACACAACGTCCTTTACCTTGGCCAAACAGTTGTCCTTTTATAAGA
TCCGTACCATTGCCCCAGGCAAGACTCACACAGCTGCTATTGATGAGCGAGGCCGGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGC
TGGGCGTTGGGAACTACAAGAAGCGTCTGGGAATCAACCTGTTGGGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTG
ATGAGTTTACCATTGCTGCCACTGATGATAATCACATTTTTGCCTGGGGCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGA
GACCACATGGCTCTGATATCTGTACCTCATGGCCTCGGCCTATTTTTGGATCTCTGCATCATGTCCCGGACCTGTCTTGCCGTGGATGGC
ATACCATTCTCATCGTTGAGAAAGTATTGAATTCTAAGACCATCCGTTCCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTCAGAGCT
CTAGCCCGGGAGGAGGCGGCGGGGGCGGCGGTGGTGAAGAAGAGGACAGTCAGCAGGAATCTGAAACTCCTGACCCAAGTGGAGGCTTCC
GAGGAACAATGGAAGCAGACCGAGGAATGGAAGGTTTAATCAGTCCCACAGAGGCCATGGGGAACAGTAATGGGGCCAGCAGCTCCTGTC
CTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATGCCTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAGAATCTG
AGAAAGATACCCTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGCCTCGT
CACCTCGGCTGAATCCTGCAGTAACCTGTGCTGGGAAGGGAACACCACTGACTCCTCCTGCGTGTGCGTGCAGCTCTCTGCAGGTGGAGG
TTGAGAGATTGCAGGGTCTGGTGTTAAAGTGTCTGGCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCAGA
AGTTGAACAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAAATGGATCCAA
AGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAG
GAGACTGGGACCCAAAGAACTTCACAGCACACTTACCGAATGCAGAGAGCAGCTTTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAA
GGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTGGAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATTGTTTTGGAGA
ATGGAAGGGCCCCCATGGCCCTGGCTTTGTCATCAGTGACTGCCATAGCAACAGCAGCTCTGTACCTCATCTGTTGATCCCACCTTTGAA
GAGGAGACACAGTGCTCACCTTAATTGCGCTGGTAGCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAAT
TCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTC
TGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTCGAAAA
AGTTCAGTTACTCTGTGCAGCTAAATGCTTTAGGAGGAAAGGTAGGCTTAGGTTGCTTTTCCTCTGAGGGTTGATTGAAATTTCTTCAGT
GAGGAATAGAGAAAGGGCAGGACCCTCCTCATCACACAGCTGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGAT
GAGGGGATGAGGTGTCTCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAGAAAATCATGAAGG
AGAAGAGGTCCTCCTTTAGCTGCCTCTACTTGGTATCTTAGAGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGAAAAGACTTCTTTG
AGCCTCTGCCTTCATGGCTCTTAGGGTTCTGATCTTGATATCAGCAGCCCCAACCACTTTCTTTCTGAATGTCTAGTCAGTATTTTTCCC
CTTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGG
AGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAATTTGGCTGAGAGCTCACTTCTAATCCTGTACTCACTGTGTCTTTGTA
GATAGAAACAAGCTAGCTTTACCAAAGAGAAATAGTGTCATAGAAGAACAAAACTTCATATAGAAAGTTCTAGGCAAGTATTTGATGGTT
TCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAATGTTCCTGTGGTATTTTGTGTCACACATCCTACCTTTGATGAGTCT
CACATCCCACCTTCCTATAAACAGCTAAATTAATTTTGTTTCATCTTCCCCAGACCAAAATGTTTGATAATCTTATCAACATTGTGGGAG
GTCTTGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAA
CTCTGTTCAATGGGATCTTCTTTGGTTTGATGTTCCCATTGTTTTCTCAGTTCTGGGAAGCCTAGTACATTAGTACTAATGTAATCACTG
AAACCTTTTCTTGAAATAAGGGAAGCAGCCAAACTTTGATTAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAG
TGGGTTTTGGTTCAGCATGTAAATGCAACTTTGATTTTCTTGAGGACCGATTGACCTGTCATGTCCCTGTATCCTCATGCTCATCATCTC
AGCAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAA
GGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCCCTGGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCAT
TTTCTCTAGCATATTCCCTTGGGAAGTCTAGATTTGCTATTAATCTGGCTGAGAATCTAAGTTCTGTGCCTTAGAGACAGTTTGCACTTT
CCCATATTGTGCCTGGGACAGCCATATGATTTTTTTTCCCACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAA
GATGAGGCAGTAGAAATGCCTTTGAATGGTTTTCTGTAGCTAATTCTCTTTAAATTTTGTCCTGCTTTTTTTCTTTATGCAGTGCTAGGT
GTTTTAAGTTTTCTAGTAGTATTGCTTTTGAGTTACAGTATAACCTGAGTTACTCCTCTGCTCTAACATTGTTGCAGAAGAACTAGTTTA

>102469_102469_1_ZNF587B-NEK9_ZNF587B_chr19_58350517_ENST00000316462_NEK9_chr14_75573405_ENST00000238616_length(amino acids)=609AA_BP=72
MQPGEGACCSRAVLSPSSPMAAAAPRRPTQGTVTFEDVAVKFTQEEWNLLSEAQRCLYRDVTLENLALMSSLDEGQLYAFGSDYYGCMGV
DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS
GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGI
NLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVEKVLNS
KTIRSNSSGLSIGTVFQSSSPGGGGGGGGGEEEDSQQESETPDPSGGFRGTMEADRGMEGLISPTEAMGNSNGASSSCPGWLRKELENAE
FIPMPDSPSPLSAAFSESEKDTLPYEELQGLKVASEAPLEHKPQVEASSPRLNPAVTCAGKGTPLTPPACACSSLQVEVERLQGLVLKCL

--------------------------------------------------------------
>102469_102469_2_ZNF587B-NEK9_ZNF587B_chr19_58350517_ENST00000442832_NEK9_chr14_75573405_ENST00000238616_length(transcript)=4455nt_BP=397nt
TTTTGATTGGTGTTGGGTTTATTTGTCGGAGAGGCTCCTGAGCGCTAGGTCGGCACTGCGGTGACTGAACCCAGAAGGCGGAGAACAGTT
GTCCTCTGCTGCACAGAGGCGACTCTGGAGCTCTGTGACGGCGCCAAGCGTGACCCACCCCTGGGCCAGGATAGGGACCGTCATGCCCAT
ATCTCCTGGCTGGTCACCCTCTCCTCCCAACCCTGCTTTAAACCACGTGGTTCGATGGCGGTGGTGGCCACGCTGAGGCTCTCTGCTCAG
GGCACAGTGACTTTTGAAGACGTGGCTGTGAAATTTACCCAGGAGGAATGGAATCTCCTTAGTGAGGCTCAGAGATGCCTGTACCGTGAT
GTGACTCTGGAGAACCTGGCACTTATGTCCTCCCTGGATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTG
GACAAAGTTGCTGGCCCTGAAGTGCTAGAACCCATGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGATAAT
CATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGCTGTGGCGAATATGGACGACTGGGTTTGGATTCAGAAGAGGATTAT
TATACACCACAAAAGGTGGATGTTCCCAAGGCCTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGGACATTTCTGTTGACCCAGTCA
GGCAAAGTGCTGGCCTGTGGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAATTATCAACCATGAAGCATACCAT
GAAGTTCCCTACACAACGTCCTTTACCTTGGCCAAACAGTTGTCCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGACTCACACAGCT
GCTATTGATGAGCGAGGCCGGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAACTACAAGAAGCGTCTGGGAATC
AACCTGTTGGGGGGACCCCTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTTACCATTGCTGCCACTGATGATAATCAC
ATTTTTGCCTGGGGCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGAGACCACATGGCTCTGATATCTGTACCTCATGGCCT
CGGCCTATTTTTGGATCTCTGCATCATGTCCCGGACCTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCT
AAGACCATCCGTTCCAATAGCAGTGGCTTATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGGAGGAGGCGGCGGGGGCGGCGGTGGT
GAAGAAGAGGACAGTCAGCAGGAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAAGGT
TTAATCAGTCCCACAGAGGCCATGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAA
TTTATCCCCATGCCTGACAGCCCATCTCCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGATACCCTGCCCTATGAAGAGCTGCAAGGA
CTCAAAGTGGCCTCTGAAGCTCCTTTGGAACACAAACCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCTGCAGTAACCTGTGCTGGG
AAGGGAACACCACTGACTCCTCCTGCGTGTGCGTGCAGCTCTCTGCAGGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAAGTGTCTG
GCTGAACAACAGAAGCTACAGCAAGAAAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAAATTAGAAGGAGGGCAGCAGGTG
GGGATGCATTCCAAAGGAACTCAGACAGCAAAGGAAGAGATGGAAATGGATCCAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTG
GGAACAGACTCCTGTAGACCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCACACTTA
CCGAATGCAGAGAGCAGCTTTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTG
GAGAGTGGCATTGCCTTTTAGATAGGATCTAGGAGTGATTTTATTGTTTTGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGTCATCA
GTGACTGCCATAGCAACAGCAGCTCTGTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGGTA
GCAGCTTATATCCCATGTATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGG
GAGAAGTGTAAAGTTGGAGTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAG
CCCTGAGTCCAGGAAAATATGTCTGATGGAGTCAATCTAGGGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGCTAAATGCTTTAGGA
GGAAAGGTAGGCTTAGGTTGCTTTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGGACCCTCCTCATCAC
ACAGCTGGTGTTTCAGGCTGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGATGAGGTGTCTCTGAGGGATGAGGTGTCT
CAGAGAATTGAGTCCATGGGGCAGTCAGAATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGTCCTCCTTTAGCTGCCTCTACTTGGTA
TCTTAGAGAGGGCTTAGAGGGCTCTCAGTCTTCTGCCCATGAAAAGACTTCTTTGAGCCTCTGCCTTCATGGCTCTTAGGGTTCTGATCT
TGATATCAGCAGCCCCAACCACTTTCTTTCTGAATGTCTAGTCAGTATTTTTCCCCTTTTGGTGTTTTATGAAGCCATGTGGTAACGAAT
GAATCTGTATCATTTTTCCTACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGC
AAAAGGAATTTGGCTGAGAGCTCACTTCTAATCCTGTACTCACTGTGTCTTTGTAGATAGAAACAAGCTAGCTTTACCAAAGAGAAATAG
TGTCATAGAAGAACAAAACTTCATATAGAAAGTTCTAGGCAAGTATTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGC
CTTGTAAAATGTTCCTGTGGTATTTTGTGTCACACATCCTACCTTTGATGAGTCTCACATCCCACCTTCCTATAAACAGCTAAATTAATT
TTGTTTCATCTTCCCCAGACCAAAATGTTTGATAATCTTATCAACATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCATTTCTCCAAA
ACTGGTGGCATAAAGGCTGATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGGTTTGATGTTC
CCATTGTTTTCTCAGTTCTGGGAAGCCTAGTACATTAGTACTAATGTAATCACTGAAACCTTTTCTTGAAATAAGGGAAGCAGCCAAACT
TTGATTAAAGTTGCAAGTTCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACTTTGAT
TTTCTTGAGGACCGATTGACCTGTCATGTCCCTGTATCCTCATGCTCATCATCTCAGCAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTC
ATCATGAGGATTGCTTCTGCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGT
GCCCTGGTCTTGTTCATAGGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTCTCTAGCATATTCCCTTGGGAAGTCTAGATTT
GCTATTAATCTGGCTGAGAATCTAAGTTCTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATATGATTTTTT
TTCCCACCAAACAAGTATGCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGCAGTAGAAATGCCTTTGAATGGTTTTCT
GTAGCTAATTCTCTTTAAATTTTGTCCTGCTTTTTTTCTTTATGCAGTGCTAGGTGTTTTAAGTTTTCTAGTAGTATTGCTTTTGAGTTA
CAGTATAACCTGAGTTACTCCTCTGCTCTAACATTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGTGGA

>102469_102469_2_ZNF587B-NEK9_ZNF587B_chr19_58350517_ENST00000442832_NEK9_chr14_75573405_ENST00000238616_length(amino acids)=631AA_BP=94
MELCDGAKRDPPLGQDRDRHAHISWLVTLSSQPCFKPRGSMAVVATLRLSAQGTVTFEDVAVKFTQEEWNLLSEAQRCLYRDVTLENLAL
MSSLDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV
PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRL
LTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLH
HVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVFQSSSPGGGGGGGGGEEEDSQQESETPDPSGGFRGTMEADRGMEGLISPTEAM
GNSNGASSSCPGWLRKELENAEFIPMPDSPSPLSAAFSESEKDTLPYEELQGLKVASEAPLEHKPQVEASSPRLNPAVTCAGKGTPLTPP
ACACSSLQVEVERLQGLVLKCLAEQQKLQQENLQIFTQLQKLNKKLEGGQQVGMHSKGTQTAKEEMEMDPKPDLDSDSWCLLGTDSCRPS

--------------------------------------------------------------
>102469_102469_3_ZNF587B-NEK9_ZNF587B_chr19_58350517_ENST00000594901_NEK9_chr14_75573405_ENST00000238616_length(transcript)=4437nt_BP=379nt
TTATTTGTCGGAGAGGCTCCTGAGCGCTAGGTCGGCACTGCGGTGACTGAACCCAGAAGGCGGAGAACAGTTGTCCTCTGCTGCACAGAG
GCGACTCTGGAGCTCTGTGACGGCGCCAAGCGTGACCCACCCCTGGGCCAGGATAGGGACCGTCATGCCCATATCTCCTGGCTGGTCACC
CTCTCCTCCCAACCCTGCTTTAAACCACGTGGTTCGATGGCGGTGGTGGCCACGCTGAGGCTCTCTGCTCAGGGCACAGTGACTTTTGAA
GACGTGGCTGTGAAATTTACCCAGGAGGAATGGAATCTCCTTAGTGAGGCTCAGAGATGCCTGTACCGTGATGTGACTCTGGAGAACCTG
GCACTTATGTCCTCCCTGGATGAGGGTCAGCTCTATGCCTTCGGATCAGATTATTATGGCTGCATGGGGGTGGACAAAGTTGCTGGCCCT
GAAGTGCTAGAACCCATGCAGCTGAACTTCTTCCTCAGCAATCCAGTGGAGCAGGTCTCCTGTGGAGATAATCATGTGGTGGTTCTGACA
CGAAACAAGGAAGTCTATTCTTGGGGCTGTGGCGAATATGGACGACTGGGTTTGGATTCAGAAGAGGATTATTATACACCACAAAAGGTG
GATGTTCCCAAGGCCTTGATTATTGTTGCAGTTCAATGTGGCTGTGATGGGACATTTCTGTTGACCCAGTCAGGCAAAGTGCTGGCCTGT
GGACTCAATGAATTCAATAAGCTGGGTCTGAATCAGTGCATGTCGGGAATTATCAACCATGAAGCATACCATGAAGTTCCCTACACAACG
TCCTTTACCTTGGCCAAACAGTTGTCCTTTTATAAGATCCGTACCATTGCCCCAGGCAAGACTCACACAGCTGCTATTGATGAGCGAGGC
CGGCTGCTGACCTTTGGCTGCAACAAGTGTGGGCAGCTGGGCGTTGGGAACTACAAGAAGCGTCTGGGAATCAACCTGTTGGGGGGACCC
CTTGGTGGGAAGCAAGTGATCAGGGTCTCCTGCGGTGATGAGTTTACCATTGCTGCCACTGATGATAATCACATTTTTGCCTGGGGCAAT
GGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGAGACCACATGGCTCTGATATCTGTACCTCATGGCCTCGGCCTATTTTTGGATCT
CTGCATCATGTCCCGGACCTGTCTTGCCGTGGATGGCATACCATTCTCATCGTTGAGAAAGTATTGAATTCTAAGACCATCCGTTCCAAT
AGCAGTGGCTTATCCATTGGAACTGTGTTTCAGAGCTCTAGCCCGGGAGGAGGCGGCGGGGGCGGCGGTGGTGAAGAAGAGGACAGTCAG
CAGGAATCTGAAACTCCTGACCCAAGTGGAGGCTTCCGAGGAACAATGGAAGCAGACCGAGGAATGGAAGGTTTAATCAGTCCCACAGAG
GCCATGGGGAACAGTAATGGGGCCAGCAGCTCCTGTCCTGGCTGGCTTCGAAAGGAGCTGGAAAATGCAGAATTTATCCCCATGCCTGAC
AGCCCATCTCCTCTCAGTGCAGCGTTTTCAGAATCTGAGAAAGATACCCTGCCCTATGAAGAGCTGCAAGGACTCAAAGTGGCCTCTGAA
GCTCCTTTGGAACACAAACCCCAAGTAGAAGCCTCGTCACCTCGGCTGAATCCTGCAGTAACCTGTGCTGGGAAGGGAACACCACTGACT
CCTCCTGCGTGTGCGTGCAGCTCTCTGCAGGTGGAGGTTGAGAGATTGCAGGGTCTGGTGTTAAAGTGTCTGGCTGAACAACAGAAGCTA
CAGCAAGAAAACCTCCAGATTTTTACCCAACTGCAGAAGTTGAACAAGAAATTAGAAGGAGGGCAGCAGGTGGGGATGCATTCCAAAGGA
ACTCAGACAGCAAAGGAAGAGATGGAAATGGATCCAAAGCCTGACTTAGATTCAGATTCCTGGTGCCTCCTGGGAACAGACTCCTGTAGA
CCCAGCCTCTAGTCTCCTGAGCCTGTAGAGCCCCCAGGAGACTGGGACCCAAAGAACTTCACAGCACACTTACCGAATGCAGAGAGCAGC
TTTCCTGGCTTTGTTCACTTGCAGAAAAGGAGCGCAAGGCAGAGGCTCTGAAGCACTTTCCTTGTACATTTGGAGAGTGGCATTGCCTTT
TAGATAGGATCTAGGAGTGATTTTATTGTTTTGGAGAATGGAAGGGCCCCCATGGCCCTGGCTTTGTCATCAGTGACTGCCATAGCAACA
GCAGCTCTGTACCTCATCTGTTGATCCCACCTTTGAAGAGGAGACACAGTGCTCACCTTAATTGCGCTGGTAGCAGCTTATATCCCATGT
ATCATTTTCACCATTGATTGGAAGCTGCCTTGGGAATTCAGTACCAGGCATTACCCCTCTGGGTGGGAGAGGGAGAAGTGTAAAGTTGGA
GTGGGCTGGAATCAGGTGTGGCCCGCCCAGTGTCCTCTGCAGAGTGGTGAAGTAGTCTGGCCCTCTTGGGAGCCCTGAGTCCAGGAAAAT
ATGTCTGATGGAGTCAATCTAGGGCTTGTTTCGAAAAAGTTCAGTTACTCTGTGCAGCTAAATGCTTTAGGAGGAAAGGTAGGCTTAGGT
TGCTTTTCCTCTGAGGGTTGATTGAAATTTCTTCAGTGAGGAATAGAGAAAGGGCAGGACCCTCCTCATCACACAGCTGGTGTTTCAGGC
TGTGACCAATGCAGGGTGGGATTTCCTAACTGTGGATGAGGGGATGAGGTGTCTCTGAGGGATGAGGTGTCTCAGAGAATTGAGTCCATG
GGGCAGTCAGAATAGCCTTAAGAGAAAATCATGAAGGAGAAGAGGTCCTCCTTTAGCTGCCTCTACTTGGTATCTTAGAGAGGGCTTAGA
GGGCTCTCAGTCTTCTGCCCATGAAAAGACTTCTTTGAGCCTCTGCCTTCATGGCTCTTAGGGTTCTGATCTTGATATCAGCAGCCCCAA
CCACTTTCTTTCTGAATGTCTAGTCAGTATTTTTCCCCTTTTGGTGTTTTATGAAGCCATGTGGTAACGAATGAATCTGTATCATTTTTC
CTACCTGAGTGGCCCAAAGCCAGCACCAAACCCTGGGAGTCCCTGAAGCCTAACAGAACAGGTAGAACTTGCAAAAGGAATTTGGCTGAG
AGCTCACTTCTAATCCTGTACTCACTGTGTCTTTGTAGATAGAAACAAGCTAGCTTTACCAAAGAGAAATAGTGTCATAGAAGAACAAAA
CTTCATATAGAAAGTTCTAGGCAAGTATTTGATGGTTTCCTTAAGGATGTGAGCTTTGTATTTCCACCTAGCCTTGTAAAATGTTCCTGT
GGTATTTTGTGTCACACATCCTACCTTTGATGAGTCTCACATCCCACCTTCCTATAAACAGCTAAATTAATTTTGTTTCATCTTCCCCAG
ACCAAAATGTTTGATAATCTTATCAACATTGTGGGAGGTCTTGTGCAATGGAAATTTTGCCATTTCTCCAAAACTGGTGGCATAAAGGCT
GATGCTTGGGGAGAACCCCATTGCTCGGGACAGGCAACTCTGTTCAATGGGATCTTCTTTGGTTTGATGTTCCCATTGTTTTCTCAGTTC
TGGGAAGCCTAGTACATTAGTACTAATGTAATCACTGAAACCTTTTCTTGAAATAAGGGAAGCAGCCAAACTTTGATTAAAGTTGCAAGT
TCTGGGGACTTGCGGGGGTTGTCATAAACTGTAACAGTGGGTTTTGGTTCAGCATGTAAATGCAACTTTGATTTTCTTGAGGACCGATTG
ACCTGTCATGTCCCTGTATCCTCATGCTCATCATCTCAGCAGGCCTGAGAGGCTGGGTCAGTTTGGGTGTTCATCATGAGGATTGCTTCT
GCCATGGAGCTGATGGACATGGGCAGGTTGCTGAGAAGGTGGGGTGAAAGTGAGTGCCGGGGGTGGGTGAGTGCCCTGGTCTTGTTCATA
GGGGAGCCTTTCCCTAGCAGTGGAACGCTGTGGTCATTTTCTCTAGCATATTCCCTTGGGAAGTCTAGATTTGCTATTAATCTGGCTGAG
AATCTAAGTTCTGTGCCTTAGAGACAGTTTGCACTTTCCCATATTGTGCCTGGGACAGCCATATGATTTTTTTTCCCACCAAACAAGTAT
GCAAACAGAAACCAGTTCAAAGGGGGATGGAGTAAAAGATGAGGCAGTAGAAATGCCTTTGAATGGTTTTCTGTAGCTAATTCTCTTTAA
ATTTTGTCCTGCTTTTTTTCTTTATGCAGTGCTAGGTGTTTTAAGTTTTCTAGTAGTATTGCTTTTGAGTTACAGTATAACCTGAGTTAC
TCCTCTGCTCTAACATTGTTGCAGAAGAACTAGTTTATTGTTAGCCAGGTTGCTTGAAAGGTTGAGAGTGGAGTGGTTTGGCATTTCTGT

>102469_102469_3_ZNF587B-NEK9_ZNF587B_chr19_58350517_ENST00000594901_NEK9_chr14_75573405_ENST00000238616_length(amino acids)=631AA_BP=94
MELCDGAKRDPPLGQDRDRHAHISWLVTLSSQPCFKPRGSMAVVATLRLSAQGTVTFEDVAVKFTQEEWNLLSEAQRCLYRDVTLENLAL
MSSLDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV
PKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRL
LTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLH
HVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVFQSSSPGGGGGGGGGEEEDSQQESETPDPSGGFRGTMEADRGMEGLISPTEAM
GNSNGASSSCPGWLRKELENAEFIPMPDSPSPLSAAFSESEKDTLPYEELQGLKVASEAPLEHKPQVEASSPRLNPAVTCAGKGTPLTPP
ACACSSLQVEVERLQGLVLKCLAEQQKLQQENLQIFTQLQKLNKKLEGGQQVGMHSKGTQTAKEEMEMDPKPDLDSDSWCLLGTDSCRPS

--------------------------------------------------------------

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Fusion Gene PPI Analysis for ZNF587B-NEK9


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
TgeneNEK9chr19:58350517chr14:75573405ENST000002386161022732_891442.3333333333333980.0NEK6


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ZNF587B-NEK9


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ZNF587B-NEK9


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource