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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ZNF805-ETFB (FusionGDB2 ID:102991)

Fusion Gene Summary for ZNF805-ETFB

check button Fusion gene summary
Fusion gene informationFusion gene name: ZNF805-ETFB
Fusion gene ID: 102991
HgeneTgene
Gene symbol

ZNF805

ETFB

Gene ID

390980

2109

Gene namezinc finger protein 805electron transfer flavoprotein subunit beta
Synonyms-FP585|MADD
Cytomap

19q13.43

19q13.41

Type of geneprotein-codingprotein-coding
Descriptionzinc finger protein 805CTC-444N24.8electron transfer flavoprotein subunit betabeta-ETFelectron transfer flavoprotein beta subunitelectron transfer flavoprotein, beta polypeptideelectron-transferring-flavoprotein, beta polypeptide
Modification date2020031320200313
UniProtAcc.

Q8IXQ9

Ensembl transtripts involved in fusion geneENST00000354309, ENST00000535550, 
ENST00000414468, 
ENST00000309244, 
ENST00000354232, 
Fusion gene scores* DoF score3 X 3 X 2=184 X 1 X 4=16
# samples 34
** MAII scorelog2(3/18*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(4/16*10)=1.32192809488736
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: ZNF805 [Title/Abstract] AND ETFB [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointZNF805(57752289)-ETFB(51857562), # samples:4
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneETFB

GO:0033539

fatty acid beta-oxidation using acyl-CoA dehydrogenase

25416781


check buttonFusion gene breakpoints across ZNF805 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across ETFB (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-24-1551-01AZNF805chr19

57752289

-ETFBchr19

51857562

-
ChimerDB4OVTCGA-24-1551-01AZNF805chr19

57752289

+ETFBchr19

51857562

-
ChimerDB4OVTCGA-24-1551ZNF805chr19

57752289

+ETFBchr19

51857562

-


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Fusion Gene ORF analysis for ZNF805-ETFB

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000354309ENST00000309244ZNF805chr19

57752289

+ETFBchr19

51857562

-
5UTR-3CDSENST00000354309ENST00000354232ZNF805chr19

57752289

+ETFBchr19

51857562

-
5UTR-3CDSENST00000535550ENST00000309244ZNF805chr19

57752289

+ETFBchr19

51857562

-
5UTR-3CDSENST00000535550ENST00000354232ZNF805chr19

57752289

+ETFBchr19

51857562

-
In-frameENST00000414468ENST00000309244ZNF805chr19

57752289

+ETFBchr19

51857562

-
In-frameENST00000414468ENST00000354232ZNF805chr19

57752289

+ETFBchr19

51857562

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000414468ZNF805chr1957752289+ENST00000354232ETFBchr1951857562-78330782240180
ENST00000414468ZNF805chr1957752289+ENST00000309244ETFBchr1951857562-781307790260

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000414468ENST00000354232ZNF805chr1957752289+ETFBchr1951857562-0.0582943520.9417056
ENST00000414468ENST00000309244ZNF805chr1957752289+ETFBchr1951857562-0.0028823370.99711764

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Fusion Genomic Features for ZNF805-ETFB


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ZNF805-ETFB


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr19:57752289/chr19:51857562)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.ETFB

Q8IXQ9

FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Protein-lysine methyltransferase that selectively trimethylates the flavoprotein ETFB in mitochondria (PubMed:25023281, PubMed:25416781). Thereby, may negatively regulate the function of ETFB in electron transfer from Acyl-CoA dehydrogenases to the main respiratory chain (PubMed:25416781). {ECO:0000269|PubMed:25023281, ECO:0000269|PubMed:25416781}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneETFBchr19:57752289chr19:51857562ENST0000030924406123_13419256.0Nucleotide bindingAMP
TgeneETFBchr19:57752289chr19:51857562ENST000003092440639_4219256.0Nucleotide bindingAMP
TgeneETFBchr19:57752289chr19:51857562ENST0000035423205123_1340347.0Nucleotide bindingAMP
TgeneETFBchr19:57752289chr19:51857562ENST000003542320539_420347.0Nucleotide bindingAMP
TgeneETFBchr19:57752289chr19:51857562ENST0000030924406183_20519256.0RegionRecognition loop
TgeneETFBchr19:57752289chr19:51857562ENST0000035423205183_2050347.0RegionRecognition loop

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+1313_840495.0DomainKRAB
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+1413_8410628.0DomainKRAB
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+2413_840495.0DomainKRAB
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13203_2250495.0Zinc fingerC2H2-type 1
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13231_2530495.0Zinc fingerC2H2-type 2
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13259_2810495.0Zinc fingerC2H2-type 3
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13287_3090495.0Zinc fingerC2H2-type 4
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13315_3370495.0Zinc fingerC2H2-type 5
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13343_3650495.0Zinc fingerC2H2-type 6
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13371_3930495.0Zinc fingerC2H2-type 7
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13399_4210495.0Zinc fingerC2H2-type 8
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13427_4490495.0Zinc fingerC2H2-type 9
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13455_4770495.0Zinc fingerC2H2-type 10
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13483_5050495.0Zinc fingerC2H2-type 11
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13511_5330495.0Zinc fingerC2H2-type 12
HgeneZNF805chr19:57752289chr19:51857562ENST00000354309+13539_5610495.0Zinc fingerC2H2-type 13
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14203_22510628.0Zinc fingerC2H2-type 1
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14231_25310628.0Zinc fingerC2H2-type 2
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14259_28110628.0Zinc fingerC2H2-type 3
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14287_30910628.0Zinc fingerC2H2-type 4
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14315_33710628.0Zinc fingerC2H2-type 5
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14343_36510628.0Zinc fingerC2H2-type 6
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14371_39310628.0Zinc fingerC2H2-type 7
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14399_42110628.0Zinc fingerC2H2-type 8
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14427_44910628.0Zinc fingerC2H2-type 9
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14455_47710628.0Zinc fingerC2H2-type 10
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14483_50510628.0Zinc fingerC2H2-type 11
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14511_53310628.0Zinc fingerC2H2-type 12
HgeneZNF805chr19:57752289chr19:51857562ENST00000414468+14539_56110628.0Zinc fingerC2H2-type 13
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24203_2250495.0Zinc fingerC2H2-type 1
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24231_2530495.0Zinc fingerC2H2-type 2
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24259_2810495.0Zinc fingerC2H2-type 3
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24287_3090495.0Zinc fingerC2H2-type 4
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24315_3370495.0Zinc fingerC2H2-type 5
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24343_3650495.0Zinc fingerC2H2-type 6
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24371_3930495.0Zinc fingerC2H2-type 7
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24399_4210495.0Zinc fingerC2H2-type 8
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24427_4490495.0Zinc fingerC2H2-type 9
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24455_4770495.0Zinc fingerC2H2-type 10
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24483_5050495.0Zinc fingerC2H2-type 11
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24511_5330495.0Zinc fingerC2H2-type 12
HgeneZNF805chr19:57752289chr19:51857562ENST00000535550+24539_5610495.0Zinc fingerC2H2-type 13


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Fusion Gene Sequence for ZNF805-ETFB


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>102991_102991_1_ZNF805-ETFB_ZNF805_chr19_57752289_ENST00000414468_ETFB_chr19_51857562_ENST00000309244_length(transcript)=781nt_BP=30nt
ATGGCGATGGCTTTGACGGACCCGGCGCAGATCCGAGTGAAGCCTGACAGGACCGGTGTGGTCACGGATGGTGTGAAGCACTCCATGAAC
CCCTTCTGTGAGATCGCGGTGGAGGAGGCTGTGCGGCTCAAGGAGAAGAAGCTGGTGAAGGAGGTCATCGCCGTCAGCTGTGGGCCTGCA
CAGTGCCAGGAGACGATTCGTACCGCCCTGGCCATGGGTGCAGACCGAGGTATCCACGTGGAGGTGCCCCCAGCAGAAGCAGAACGCTTG
GGTCCCCTGCAGGTGGCTCGGGTCCTGGCCAAGCTGGCAGAGAAGGAGAAGGTGGACCTGGTGCTGCTGGGCAAACAGGCCATCGATGAT
GACTGTAACCAGACAGGGCAGATGACAGCTGGATTTCTTGACTGGCCACAGGGCACATTCGCCTCCCAGGTGACGCTGGAGGGGGACAAG
TTGAAAGTGGAGCGGGAGATCGATGGGGGCCTGGAGACCCTGCGCCTGAAGCTGCCAGCTGTGGTGACAGCTGACCTGAGGCTCAACGAG
CCCCGCTACGCCACGCTGCCCAACATCATGAAAGCCAAGAAGAAGAAGATCGAGGTGATCAAGCCTGGGGACCTGGGTGTGGACCTGACC
TCCAAGCTCTCTGTGATCAGTGTGGAGGACCCGCCCCAGCGCACGGCCGGCGTCAAGGTGGAGACCACTGAGGACCTGGTGGCCAAGCTG

>102991_102991_1_ZNF805-ETFB_ZNF805_chr19_57752289_ENST00000414468_ETFB_chr19_51857562_ENST00000309244_length(amino acids)=260AA_BP=0
MLRVSFIAISGRGSNPPNLLQLGHQVLSGLHLDAGRALGRVLHTDHRELGGQVHTQVPRLDHLDLLLLGFHDVGQRGVAGLVEPQVSCHH
SWQLQAQGLQAPIDLPLHFQLVPLQRHLGGECALWPVKKSSCHLPCLVTVIIDGLFAQQHQVHLLLLCQLGQDPSHLQGTQAFCFCWGHL

--------------------------------------------------------------
>102991_102991_2_ZNF805-ETFB_ZNF805_chr19_57752289_ENST00000414468_ETFB_chr19_51857562_ENST00000354232_length(transcript)=783nt_BP=30nt
ATGGCGATGGCTTTGACGGACCCGGCGCAGAAAGCCAAGAAGAAGAAGATCGAGGTGATCAAGCCTGGGGACCTGGGTGTGGACCTGACC
TCCAAGCTCTCTGTGATCAGTGTGGAGGACCCGCCCCAGCGCACGGCCGGCGTCAAGGTGGAGACCACTGAGGACCTGGTGGCCAAGCTG
AAGGAGATTGGGCGGATTTGAGCCCCTCCCAGAGATGGCAATAAAACTGACTCTCAACATCTAGGCACATTCGCCTCCCAGGTGACGCTG
GAGGGGGACAAGTTGAAAGTGGAGCGGGAGATCGATGGGGGCCTGGAGACCCTGCGCCTGAAGCTGCCAGCTGTGGTGACAGCTGACCTG
AGGCTCAACGAGCCCCGCTACGCCACGCTGCCCAACATCATGGCCATCGATGATGACTGTAACCAGACAGGGCAGATGACAGCTGGATTT
CTTGACTGGCCACAGGAGACGATTCGTACCGCCCTGGCCATGGGTGCAGACCGAGGTATCCACGTGGAGGTGCCCCCAGCAGAAGCAGAA
CGCTTGGGTCCCCTGCAGGTGGCTCGGGTCCTGGCCAAGCTGGCAGAGAAGGAGAAGGTGGACCTGGTGCTGCTGGGCAAACAGATCCGA
GTGAAGCCTGACAGGACCGGTGTGGTCACGGATGGTGTGAAGCACTCCATGAACCCCTTCTGTGAGATCGCGGTGGAGGAGGCTGTGCGG

>102991_102991_2_ZNF805-ETFB_ZNF805_chr19_57752289_ENST00000414468_ETFB_chr19_51857562_ENST00000354232_length(amino acids)=180AA_BP=0
LALCRPTADGDDLLHQLLLLEPHSLLHRDLTEGVHGVLHTIRDHTGPVRLHSDLFAQQHQVHLLLLCQLGQDPSHLQGTQAFCFCWGHLH
VDTSVCTHGQGGTNRLLWPVKKSSCHLPCLVTVIIDGHDVGQRGVAGLVEPQVSCHHSWQLQAQGLQAPIDLPLHFQLVPLQRHLGGECA

--------------------------------------------------------------

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Fusion Gene PPI Analysis for ZNF805-ETFB


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ZNF805-ETFB


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ZNF805-ETFB


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource