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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:CACNA1D-IL17RB (FusionGDB2 ID:12322)

Fusion Gene Summary for CACNA1D-IL17RB

check button Fusion gene summary
Fusion gene informationFusion gene name: CACNA1D-IL17RB
Fusion gene ID: 12322
HgeneTgene
Gene symbol

CACNA1D

IL17RB

Gene ID

776

55540

Gene namecalcium voltage-gated channel subunit alpha1 Dinterleukin 17 receptor B
SynonymsCACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDDCRL4|EVI27|IL17BR|IL17RH1
Cytomap

3p21.1

3p21.1

Type of geneprotein-codingprotein-coding
Descriptionvoltage-dependent L-type calcium channel subunit alpha-1Dcalcium channel, L type, alpha-1 polypeptidecalcium channel, neuroendocrine/brain-type, alpha 1 subunitcalcium channel, voltage-dependent, L type, alpha 1D subunitvoltage-gated calcium channel ainterleukin-17 receptor BIL-17 receptor BIL-17 receptor homolog 1IL-17B receptorIL-17RBIL-17Rh1cytokine receptor CRL4cytokine receptor-like 4interleukin 17 receptor homolog 1interleukin-17B receptor
Modification date2020031320200313
UniProtAcc

Q01668

.
Ensembl transtripts involved in fusion geneENST00000288139, ENST00000350061, 
ENST00000422281, ENST00000498251, 
ENST00000540742, ENST00000544977, 
ENST00000288167, 
Fusion gene scores* DoF score11 X 9 X 5=4952 X 3 X 2=12
# samples 153
** MAII scorelog2(15/495*10)=-1.72246602447109
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(3/12*10)=1.32192809488736
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: CACNA1D [Title/Abstract] AND IL17RB [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCACNA1D(53535747)-IL17RB(53898772), # samples:1
CACNA1D(53535747)-IL17RB(53898773), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCACNA1D

GO:0006816

calcium ion transport

11160515

HgeneCACNA1D

GO:0051928

positive regulation of calcium ion transport

1309651

HgeneCACNA1D

GO:0070509

calcium ion import

1309651


check buttonFusion gene breakpoints across CACNA1D (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across IL17RB (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4LIHCTCGA-ED-A4XI-01ACACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
ChimerDB4LIHCTCGA-ED-A4XICACNA1Dchr3

53535747

+IL17RBchr3

53898772

+


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Fusion Gene ORF analysis for CACNA1D-IL17RB

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000288139ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
In-frameENST00000288139ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898772

+
In-frameENST00000350061ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
In-frameENST00000350061ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898772

+
In-frameENST00000422281ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
In-frameENST00000422281ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898772

+
intron-3CDSENST00000498251ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
intron-3CDSENST00000498251ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898772

+
intron-3CDSENST00000540742ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
intron-3CDSENST00000540742ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898772

+
intron-3CDSENST00000544977ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898773

+
intron-3CDSENST00000544977ENST00000288167CACNA1Dchr3

53535747

+IL17RBchr3

53898772

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000350061CACNA1Dchr353535747+ENST00000288167IL17RBchr353898772+20499945111167218
ENST00000288139CACNA1Dchr353535747+ENST00000288167IL17RBchr353898772+1656601118774218
ENST00000422281CACNA1Dchr353535747+ENST00000288167IL17RBchr353898772+15384830656218
ENST00000350061CACNA1Dchr353535747+ENST00000288167IL17RBchr353898773+20499945111167218
ENST00000288139CACNA1Dchr353535747+ENST00000288167IL17RBchr353898773+1656601118774218
ENST00000422281CACNA1Dchr353535747+ENST00000288167IL17RBchr353898773+15384830656218

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000350061ENST00000288167CACNA1Dchr353535747+IL17RBchr353898772+0.0920967760.9079032
ENST00000288139ENST00000288167CACNA1Dchr353535747+IL17RBchr353898772+0.054784490.9452155
ENST00000422281ENST00000288167CACNA1Dchr353535747+IL17RBchr353898772+0.0349009670.96509904
ENST00000350061ENST00000288167CACNA1Dchr353535747+IL17RBchr353898773+0.0920967760.9079032
ENST00000288139ENST00000288167CACNA1Dchr353535747+IL17RBchr353898773+0.054784490.9452155
ENST00000422281ENST00000288167CACNA1Dchr353535747+IL17RBchr353898773+0.0349009670.96509904

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Fusion Genomic Features for CACNA1D-IL17RB


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
CACNA1Dchr353535747+IL17RBchr353898772+0.0226463820.9773536
CACNA1Dchr353535747+IL17RBchr353898772+0.0226463820.9773536
CACNA1Dchr353535747+IL17RBchr353898772+0.0226463820.9773536
CACNA1Dchr353535747+IL17RBchr353898772+0.0226463820.9773536

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for CACNA1D-IL17RB


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:53535747/chr3:53898772)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CACNA1D

Q01668

.
FUNCTION: Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1D gives rise to L-type calcium currents. Long-lasting (L-type) calcium channels belong to the 'high-voltage activated' (HVA) group. They are blocked by dihydropyridines (DHP), phenylalkylamines, and by benzothiazepines. {ECO:0000269|PubMed:18482979, ECO:0000269|PubMed:25620733, ECO:0000269|PubMed:28472301}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491_71612182.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481_71612162.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461_71612138.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491_71612182.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481_71612162.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461_71612138.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349146_1631612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491_1261612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348146_1631612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481_1261612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346146_1631612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461_1261612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349146_1631612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491_1261612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348146_1631612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481_1261612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346146_1631612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461_1261612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349127_1451612182.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348127_1451612162.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346127_1451612138.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349127_1451612182.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348127_1451612162.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346127_1451612138.0TransmembraneHelical%3B Name%3DS1 of repeat I
TgeneIL17RBchr3:53535747chr3:53898772ENST00000288167911331_477315503.0DomainSEFIR
TgeneIL17RBchr3:53535747chr3:53898773ENST00000288167911331_477315503.0DomainSEFIR
TgeneIL17RBchr3:53535747chr3:53898772ENST00000288167911314_502315503.0Topological domainCytoplasmic
TgeneIL17RBchr3:53535747chr3:53898773ENST00000288167911314_502315503.0Topological domainCytoplasmic

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491493_15041612182.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481493_15041612162.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461493_15041612138.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491493_15041612182.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481493_15041612162.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461493_15041612138.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349653_6591612182.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349827_8381612182.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348653_6591612162.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348827_8381612162.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346653_6591612138.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346827_8381612138.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349653_6591612182.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349827_8381612182.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348653_6591612162.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348827_8381612162.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346653_6591612138.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346827_8381612138.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491075_11651612182.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491420_14861612182.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491432_14751612182.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349429_4461612182.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481075_11651612162.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481420_14861612162.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481432_14751612162.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348429_4461612162.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461075_11651612138.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461420_14861612138.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461432_14751612138.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346429_4461612138.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491075_11651612182.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491420_14861612182.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491432_14751612182.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349429_4461612182.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481075_11651612162.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481420_14861612162.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481432_14751612162.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348429_4461612162.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461075_11651612138.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461420_14861612138.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461432_14751612138.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346429_4461612138.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349113_4091612182.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491192_14671612182.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349509_7551612182.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349873_11551612182.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348113_4091612162.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481192_14671612162.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348509_7551612162.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348873_11551612162.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346113_4091612138.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461192_14671612138.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346509_7551612138.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346873_11551612138.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349113_4091612182.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491192_14671612182.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349509_7551612182.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349873_11551612182.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348113_4091612162.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481192_14671612162.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348509_7551612162.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348873_11551612162.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346113_4091612138.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461192_14671612138.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346509_7551612138.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346873_11551612138.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491038_11271612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491149_12051612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491225_12391612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491260_12661612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491289_13131612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491334_13521612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491373_14391612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491465_21611612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349184_1951612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349215_2351612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349255_2731612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349294_3811612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349407_5231612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349544_5581612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349578_5851612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349605_6141612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349634_6521612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349674_7271612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349753_8861612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349906_9211612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349942_9531612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349973_9781612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349999_10171612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481038_11271612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481149_12051612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481225_12391612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481260_12661612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481289_13131612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481334_13521612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481373_14391612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481465_21611612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348184_1951612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348215_2351612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348255_2731612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348294_3811612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348407_5231612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348544_5581612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348578_5851612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348605_6141612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348634_6521612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348674_7271612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348753_8861612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348906_9211612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348942_9531612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348973_9781612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348999_10171612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461038_11271612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461149_12051612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461225_12391612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461260_12661612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461289_13131612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461334_13521612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461373_14391612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461465_21611612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346184_1951612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346215_2351612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346255_2731612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346294_3811612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346407_5231612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346544_5581612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346578_5851612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346605_6141612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346634_6521612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346674_7271612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346753_8861612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346906_9211612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346942_9531612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346973_9781612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346999_10171612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491038_11271612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491149_12051612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491225_12391612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491260_12661612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491289_13131612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491334_13521612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491373_14391612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491465_21611612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349184_1951612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349215_2351612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349255_2731612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349294_3811612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349407_5231612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349544_5581612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349578_5851612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349605_6141612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349634_6521612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349674_7271612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349753_8861612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349906_9211612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349942_9531612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349973_9781612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349999_10171612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481038_11271612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481149_12051612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481225_12391612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481260_12661612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481289_13131612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481334_13521612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481373_14391612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481465_21611612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348184_1951612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348215_2351612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348255_2731612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348294_3811612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348407_5231612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348544_5581612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348578_5851612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348605_6141612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348634_6521612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348674_7271612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348753_8861612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348906_9211612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348942_9531612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348973_9781612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348999_10171612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461038_11271612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461149_12051612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461225_12391612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461260_12661612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461289_13131612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461334_13521612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461373_14391612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461465_21611612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346184_1951612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346215_2351612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346255_2731612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346294_3811612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346407_5231612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346544_5581612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346578_5851612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346605_6141612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346634_6521612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346674_7271612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346753_8861612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346906_9211612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346942_9531612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346973_9781612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346999_10171612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491018_10371612182.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491128_11481612182.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491206_12241612182.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491240_12591612182.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491267_12881612182.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491314_13331612182.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491353_13721612182.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+3491440_14641612182.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349164_1831612182.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349196_2141612182.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349236_2541612182.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349274_2931612182.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349382_4061612182.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349524_5431612182.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349559_5771612182.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349586_6041612182.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349615_6331612182.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349653_6731612182.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349728_7521612182.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349887_9051612182.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349922_9411612182.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349954_9721612182.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000288139+349979_9981612182.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481018_10371612162.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481128_11481612162.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481206_12241612162.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481240_12591612162.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481267_12881612162.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481314_13331612162.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481353_13721612162.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+3481440_14641612162.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348164_1831612162.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348196_2141612162.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348236_2541612162.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348274_2931612162.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348382_4061612162.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348524_5431612162.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348559_5771612162.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348586_6041612162.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348615_6331612162.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348653_6731612162.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348728_7521612162.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348887_9051612162.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348922_9411612162.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348954_9721612162.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000350061+348979_9981612162.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461018_10371612138.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461128_11481612138.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461206_12241612138.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461240_12591612138.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461267_12881612138.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461314_13331612138.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461353_13721612138.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+3461440_14641612138.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346164_1831612138.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346196_2141612138.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346236_2541612138.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346274_2931612138.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346382_4061612138.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346524_5431612138.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346559_5771612138.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346586_6041612138.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346615_6331612138.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346653_6731612138.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346728_7521612138.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346887_9051612138.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346922_9411612138.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346954_9721612138.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898772ENST00000422281+346979_9981612138.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491018_10371612182.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491128_11481612182.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491206_12241612182.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491240_12591612182.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491267_12881612182.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491314_13331612182.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491353_13721612182.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+3491440_14641612182.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349164_1831612182.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349196_2141612182.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349236_2541612182.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349274_2931612182.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349382_4061612182.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349524_5431612182.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349559_5771612182.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349586_6041612182.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349615_6331612182.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349653_6731612182.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349728_7521612182.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349887_9051612182.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349922_9411612182.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349954_9721612182.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000288139+349979_9981612182.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481018_10371612162.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481128_11481612162.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481206_12241612162.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481240_12591612162.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481267_12881612162.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481314_13331612162.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481353_13721612162.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+3481440_14641612162.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348164_1831612162.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348196_2141612162.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348236_2541612162.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348274_2931612162.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348382_4061612162.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348524_5431612162.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348559_5771612162.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348586_6041612162.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348615_6331612162.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348653_6731612162.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348728_7521612162.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348887_9051612162.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348922_9411612162.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348954_9721612162.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000350061+348979_9981612162.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461018_10371612138.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461128_11481612138.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461206_12241612138.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461240_12591612138.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461267_12881612138.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461314_13331612138.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461353_13721612138.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+3461440_14641612138.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346164_1831612138.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346196_2141612138.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346236_2541612138.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346274_2931612138.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346382_4061612138.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346524_5431612138.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346559_5771612138.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346586_6041612138.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346615_6331612138.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346653_6731612138.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346728_7521612138.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346887_9051612138.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346922_9411612138.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346954_9721612138.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53898773ENST00000422281+346979_9981612138.0TransmembraneHelical%3B Name%3DS4 of repeat III
TgeneIL17RBchr3:53535747chr3:53898772ENST0000028816791118_292315503.0Topological domainExtracellular
TgeneIL17RBchr3:53535747chr3:53898773ENST0000028816791118_292315503.0Topological domainExtracellular
TgeneIL17RBchr3:53535747chr3:53898772ENST00000288167911293_313315503.0TransmembraneHelical
TgeneIL17RBchr3:53535747chr3:53898773ENST00000288167911293_313315503.0TransmembraneHelical


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Fusion Gene Sequence for CACNA1D-IL17RB


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>12322_12322_1_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000288139_IL17RB_chr3_53898772_ENST00000288167_length(transcript)=1656nt_BP=601nt
AGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCAC
ACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGC
GAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCT
GTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTC
CCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACT
CAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGT
GGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAACTTGAAAGGATCAAGAAGACTTCCTTTTCTACC
ACCACACTACTGCCCCCCATTAAGGTTCTTGTGGTTTACCCATCTGAAATATGTTTCCATCACACAATTTGTTACTTCACTGAATTTCTT
CAAAACCATTGCAGAAGTGAGGTCATCCTTGAAAAGTGGCAGAAAAAGAAAATAGCAGAGATGGGTCCAGTGCAGTGGCTTGCCACTCAA
AAGAAGGCAGCAGACAAAGTCGTCTTCCTTCTTTCCAATGACGTCAACAGTGTGTGCGATGGTACCTGTGGCAAGAGCGAGGGCAGTCCC
AGTGAGAACTCTCAAGACCTCTTCCCCCTTGCCTTTAACCTTTTCTGCAGTGATCTAAGAAGCCAGATTCATCTGCACAAATACGTGGTG
GTCTACTTTAGAGAGATTGATACAAAAGACGATTACAATGCTCTCAGTGTCTGCCCCAAGTACCACCTCATGAAGGATGCCACTGCTTTC
TGTGCAGAACTTCTCCATGTCAAGCAGCAGGTGTCAGCAGGAAAAAGATCACAAGCCTGCCACGATGGCTGCTGCTCCTTGTAGCCCACC
CATGAGAAGCAAGAGACCTTAAAGGCTTCCTATCCCACCAATTACAGGGAAAAAACGTGTGATGATCCTGAAGCTTACTATGCAGCCTAC
AAACAGCCTTAGTAATTAAAACATTTTATACCAATAAAATTTTCAAATATTGCTAACTAATGTAGCATTAACTAACGATTGGAAACTACA
TTTACAACTTCAAAGCTGTTTTATACATAGAAATCAATTACAGTTTTAATTGAAAACTATAACCATTTTGATAATGCAACAATAAAGCAT
CTTCAGCCAAACATCTAGTCTTCCATAGACCATGCATTGCAGTGTACCCAGAACTGTTTAGCTAATATTCTATGTTTAATTAATGAATAC
TAACTCTAAGAACCCCTCACTGATTCACTCAATAGCATCTTAAGTGAAAAACCTTCTATTACATGCAAAAAATCATTGTTTTTAAGATAA

>12322_12322_1_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000288139_IL17RB_chr3_53898772_ENST00000288167_length(amino acids)=218AA_BP=0
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLKGSRRLPFLPPHYCPPLRF

--------------------------------------------------------------
>12322_12322_2_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000288139_IL17RB_chr3_53898773_ENST00000288167_length(transcript)=1656nt_BP=601nt
AGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCAC
ACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGC
GAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCT
GTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTC
CCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACT
CAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGT
GGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAACTTGAAAGGATCAAGAAGACTTCCTTTTCTACC
ACCACACTACTGCCCCCCATTAAGGTTCTTGTGGTTTACCCATCTGAAATATGTTTCCATCACACAATTTGTTACTTCACTGAATTTCTT
CAAAACCATTGCAGAAGTGAGGTCATCCTTGAAAAGTGGCAGAAAAAGAAAATAGCAGAGATGGGTCCAGTGCAGTGGCTTGCCACTCAA
AAGAAGGCAGCAGACAAAGTCGTCTTCCTTCTTTCCAATGACGTCAACAGTGTGTGCGATGGTACCTGTGGCAAGAGCGAGGGCAGTCCC
AGTGAGAACTCTCAAGACCTCTTCCCCCTTGCCTTTAACCTTTTCTGCAGTGATCTAAGAAGCCAGATTCATCTGCACAAATACGTGGTG
GTCTACTTTAGAGAGATTGATACAAAAGACGATTACAATGCTCTCAGTGTCTGCCCCAAGTACCACCTCATGAAGGATGCCACTGCTTTC
TGTGCAGAACTTCTCCATGTCAAGCAGCAGGTGTCAGCAGGAAAAAGATCACAAGCCTGCCACGATGGCTGCTGCTCCTTGTAGCCCACC
CATGAGAAGCAAGAGACCTTAAAGGCTTCCTATCCCACCAATTACAGGGAAAAAACGTGTGATGATCCTGAAGCTTACTATGCAGCCTAC
AAACAGCCTTAGTAATTAAAACATTTTATACCAATAAAATTTTCAAATATTGCTAACTAATGTAGCATTAACTAACGATTGGAAACTACA
TTTACAACTTCAAAGCTGTTTTATACATAGAAATCAATTACAGTTTTAATTGAAAACTATAACCATTTTGATAATGCAACAATAAAGCAT
CTTCAGCCAAACATCTAGTCTTCCATAGACCATGCATTGCAGTGTACCCAGAACTGTTTAGCTAATATTCTATGTTTAATTAATGAATAC
TAACTCTAAGAACCCCTCACTGATTCACTCAATAGCATCTTAAGTGAAAAACCTTCTATTACATGCAAAAAATCATTGTTTTTAAGATAA

>12322_12322_2_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000288139_IL17RB_chr3_53898773_ENST00000288167_length(amino acids)=218AA_BP=0
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLKGSRRLPFLPPHYCPPLRF

--------------------------------------------------------------
>12322_12322_3_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000350061_IL17RB_chr3_53898772_ENST00000288167_length(transcript)=2049nt_BP=994nt
GGGCGAGCGCCTCCGTCCCCGGATGTGAGCTCCGGCTGCCCGCGGTCCCGAGCCAGCGGCGGCGCGGGCGGCGGCGGCGGGCACCGGGCA
CCGCGGCGGGCGGGCAGACGGGCGGGCATGGGGGGAGCGCCGAGCGGCCCCGGCGGCCGGGCCGGCATCACCGCGGCGTCTCTCCGCTAG
AGGAGGGGACAAGCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATATATTATTAAGATAATATATACATTGGATTTTATTTTTTTAAA
AAGTTTATTTTGCTCCATTTTTGAAAAAGAGAGAGCTTGGGTGGCGAGCGGTTTTTTTTTTAAATCAATTATCCTTATTTTCTGTTATTT
GTCCCCGTCCCTCCCCACCCCCCTGCTGAAGCGAGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGC
CCCCGCCTCAACGCCCAGCACAGTGCCCTGCACACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAAT
GCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAAC
TTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAG
CACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAG
CCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACAT
ATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAA
CTTGAAAGGATCAAGAAGACTTCCTTTTCTACCACCACACTACTGCCCCCCATTAAGGTTCTTGTGGTTTACCCATCTGAAATATGTTTC
CATCACACAATTTGTTACTTCACTGAATTTCTTCAAAACCATTGCAGAAGTGAGGTCATCCTTGAAAAGTGGCAGAAAAAGAAAATAGCA
GAGATGGGTCCAGTGCAGTGGCTTGCCACTCAAAAGAAGGCAGCAGACAAAGTCGTCTTCCTTCTTTCCAATGACGTCAACAGTGTGTGC
GATGGTACCTGTGGCAAGAGCGAGGGCAGTCCCAGTGAGAACTCTCAAGACCTCTTCCCCCTTGCCTTTAACCTTTTCTGCAGTGATCTA
AGAAGCCAGATTCATCTGCACAAATACGTGGTGGTCTACTTTAGAGAGATTGATACAAAAGACGATTACAATGCTCTCAGTGTCTGCCCC
AAGTACCACCTCATGAAGGATGCCACTGCTTTCTGTGCAGAACTTCTCCATGTCAAGCAGCAGGTGTCAGCAGGAAAAAGATCACAAGCC
TGCCACGATGGCTGCTGCTCCTTGTAGCCCACCCATGAGAAGCAAGAGACCTTAAAGGCTTCCTATCCCACCAATTACAGGGAAAAAACG
TGTGATGATCCTGAAGCTTACTATGCAGCCTACAAACAGCCTTAGTAATTAAAACATTTTATACCAATAAAATTTTCAAATATTGCTAAC
TAATGTAGCATTAACTAACGATTGGAAACTACATTTACAACTTCAAAGCTGTTTTATACATAGAAATCAATTACAGTTTTAATTGAAAAC
TATAACCATTTTGATAATGCAACAATAAAGCATCTTCAGCCAAACATCTAGTCTTCCATAGACCATGCATTGCAGTGTACCCAGAACTGT
TTAGCTAATATTCTATGTTTAATTAATGAATACTAACTCTAAGAACCCCTCACTGATTCACTCAATAGCATCTTAAGTGAAAAACCTTCT

>12322_12322_3_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000350061_IL17RB_chr3_53898772_ENST00000288167_length(amino acids)=218AA_BP=0
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLKGSRRLPFLPPHYCPPLRF

--------------------------------------------------------------
>12322_12322_4_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000350061_IL17RB_chr3_53898773_ENST00000288167_length(transcript)=2049nt_BP=994nt
GGGCGAGCGCCTCCGTCCCCGGATGTGAGCTCCGGCTGCCCGCGGTCCCGAGCCAGCGGCGGCGCGGGCGGCGGCGGCGGGCACCGGGCA
CCGCGGCGGGCGGGCAGACGGGCGGGCATGGGGGGAGCGCCGAGCGGCCCCGGCGGCCGGGCCGGCATCACCGCGGCGTCTCTCCGCTAG
AGGAGGGGACAAGCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATATATTATTAAGATAATATATACATTGGATTTTATTTTTTTAAA
AAGTTTATTTTGCTCCATTTTTGAAAAAGAGAGAGCTTGGGTGGCGAGCGGTTTTTTTTTTAAATCAATTATCCTTATTTTCTGTTATTT
GTCCCCGTCCCTCCCCACCCCCCTGCTGAAGCGAGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGC
CCCCGCCTCAACGCCCAGCACAGTGCCCTGCACACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAAT
GCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAAC
TTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAG
CACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAG
CCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACAT
ATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAA
CTTGAAAGGATCAAGAAGACTTCCTTTTCTACCACCACACTACTGCCCCCCATTAAGGTTCTTGTGGTTTACCCATCTGAAATATGTTTC
CATCACACAATTTGTTACTTCACTGAATTTCTTCAAAACCATTGCAGAAGTGAGGTCATCCTTGAAAAGTGGCAGAAAAAGAAAATAGCA
GAGATGGGTCCAGTGCAGTGGCTTGCCACTCAAAAGAAGGCAGCAGACAAAGTCGTCTTCCTTCTTTCCAATGACGTCAACAGTGTGTGC
GATGGTACCTGTGGCAAGAGCGAGGGCAGTCCCAGTGAGAACTCTCAAGACCTCTTCCCCCTTGCCTTTAACCTTTTCTGCAGTGATCTA
AGAAGCCAGATTCATCTGCACAAATACGTGGTGGTCTACTTTAGAGAGATTGATACAAAAGACGATTACAATGCTCTCAGTGTCTGCCCC
AAGTACCACCTCATGAAGGATGCCACTGCTTTCTGTGCAGAACTTCTCCATGTCAAGCAGCAGGTGTCAGCAGGAAAAAGATCACAAGCC
TGCCACGATGGCTGCTGCTCCTTGTAGCCCACCCATGAGAAGCAAGAGACCTTAAAGGCTTCCTATCCCACCAATTACAGGGAAAAAACG
TGTGATGATCCTGAAGCTTACTATGCAGCCTACAAACAGCCTTAGTAATTAAAACATTTTATACCAATAAAATTTTCAAATATTGCTAAC
TAATGTAGCATTAACTAACGATTGGAAACTACATTTACAACTTCAAAGCTGTTTTATACATAGAAATCAATTACAGTTTTAATTGAAAAC
TATAACCATTTTGATAATGCAACAATAAAGCATCTTCAGCCAAACATCTAGTCTTCCATAGACCATGCATTGCAGTGTACCCAGAACTGT
TTAGCTAATATTCTATGTTTAATTAATGAATACTAACTCTAAGAACCCCTCACTGATTCACTCAATAGCATCTTAAGTGAAAAACCTTCT

>12322_12322_4_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000350061_IL17RB_chr3_53898773_ENST00000288167_length(amino acids)=218AA_BP=0
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLKGSRRLPFLPPHYCPPLRF

--------------------------------------------------------------
>12322_12322_5_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000422281_IL17RB_chr3_53898772_ENST00000288167_length(transcript)=1538nt_BP=483nt
ATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACC
AGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCT
AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAG
AGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATT
AGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCT
GAAGATGATTCTAATTCAACAAATCATAACTTGAAAGGATCAAGAAGACTTCCTTTTCTACCACCACACTACTGCCCCCCATTAAGGTTC
TTGTGGTTTACCCATCTGAAATATGTTTCCATCACACAATTTGTTACTTCACTGAATTTCTTCAAAACCATTGCAGAAGTGAGGTCATCC
TTGAAAAGTGGCAGAAAAAGAAAATAGCAGAGATGGGTCCAGTGCAGTGGCTTGCCACTCAAAAGAAGGCAGCAGACAAAGTCGTCTTCC
TTCTTTCCAATGACGTCAACAGTGTGTGCGATGGTACCTGTGGCAAGAGCGAGGGCAGTCCCAGTGAGAACTCTCAAGACCTCTTCCCCC
TTGCCTTTAACCTTTTCTGCAGTGATCTAAGAAGCCAGATTCATCTGCACAAATACGTGGTGGTCTACTTTAGAGAGATTGATACAAAAG
ACGATTACAATGCTCTCAGTGTCTGCCCCAAGTACCACCTCATGAAGGATGCCACTGCTTTCTGTGCAGAACTTCTCCATGTCAAGCAGC
AGGTGTCAGCAGGAAAAAGATCACAAGCCTGCCACGATGGCTGCTGCTCCTTGTAGCCCACCCATGAGAAGCAAGAGACCTTAAAGGCTT
CCTATCCCACCAATTACAGGGAAAAAACGTGTGATGATCCTGAAGCTTACTATGCAGCCTACAAACAGCCTTAGTAATTAAAACATTTTA
TACCAATAAAATTTTCAAATATTGCTAACTAATGTAGCATTAACTAACGATTGGAAACTACATTTACAACTTCAAAGCTGTTTTATACAT
AGAAATCAATTACAGTTTTAATTGAAAACTATAACCATTTTGATAATGCAACAATAAAGCATCTTCAGCCAAACATCTAGTCTTCCATAG
ACCATGCATTGCAGTGTACCCAGAACTGTTTAGCTAATATTCTATGTTTAATTAATGAATACTAACTCTAAGAACCCCTCACTGATTCAC
TCAATAGCATCTTAAGTGAAAAACCTTCTATTACATGCAAAAAATCATTGTTTTTAAGATAACAAAAGTAGGGAATAAACAAGCTGAACC

>12322_12322_5_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000422281_IL17RB_chr3_53898772_ENST00000288167_length(amino acids)=218AA_BP=0
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLKGSRRLPFLPPHYCPPLRF

--------------------------------------------------------------
>12322_12322_6_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000422281_IL17RB_chr3_53898773_ENST00000288167_length(transcript)=1538nt_BP=483nt
ATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACC
AGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCT
AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAG
AGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATT
AGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCT
GAAGATGATTCTAATTCAACAAATCATAACTTGAAAGGATCAAGAAGACTTCCTTTTCTACCACCACACTACTGCCCCCCATTAAGGTTC
TTGTGGTTTACCCATCTGAAATATGTTTCCATCACACAATTTGTTACTTCACTGAATTTCTTCAAAACCATTGCAGAAGTGAGGTCATCC
TTGAAAAGTGGCAGAAAAAGAAAATAGCAGAGATGGGTCCAGTGCAGTGGCTTGCCACTCAAAAGAAGGCAGCAGACAAAGTCGTCTTCC
TTCTTTCCAATGACGTCAACAGTGTGTGCGATGGTACCTGTGGCAAGAGCGAGGGCAGTCCCAGTGAGAACTCTCAAGACCTCTTCCCCC
TTGCCTTTAACCTTTTCTGCAGTGATCTAAGAAGCCAGATTCATCTGCACAAATACGTGGTGGTCTACTTTAGAGAGATTGATACAAAAG
ACGATTACAATGCTCTCAGTGTCTGCCCCAAGTACCACCTCATGAAGGATGCCACTGCTTTCTGTGCAGAACTTCTCCATGTCAAGCAGC
AGGTGTCAGCAGGAAAAAGATCACAAGCCTGCCACGATGGCTGCTGCTCCTTGTAGCCCACCCATGAGAAGCAAGAGACCTTAAAGGCTT
CCTATCCCACCAATTACAGGGAAAAAACGTGTGATGATCCTGAAGCTTACTATGCAGCCTACAAACAGCCTTAGTAATTAAAACATTTTA
TACCAATAAAATTTTCAAATATTGCTAACTAATGTAGCATTAACTAACGATTGGAAACTACATTTACAACTTCAAAGCTGTTTTATACAT
AGAAATCAATTACAGTTTTAATTGAAAACTATAACCATTTTGATAATGCAACAATAAAGCATCTTCAGCCAAACATCTAGTCTTCCATAG
ACCATGCATTGCAGTGTACCCAGAACTGTTTAGCTAATATTCTATGTTTAATTAATGAATACTAACTCTAAGAACCCCTCACTGATTCAC
TCAATAGCATCTTAAGTGAAAAACCTTCTATTACATGCAAAAAATCATTGTTTTTAAGATAACAAAAGTAGGGAATAAACAAGCTGAACC

>12322_12322_6_CACNA1D-IL17RB_CACNA1D_chr3_53535747_ENST00000422281_IL17RB_chr3_53898773_ENST00000288167_length(amino acids)=218AA_BP=0
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLKGSRRLPFLPPHYCPPLRF

--------------------------------------------------------------

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Fusion Gene PPI Analysis for CACNA1D-IL17RB


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for CACNA1D-IL17RB


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for CACNA1D-IL17RB


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource