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	Fusion Gene Summary
	Fusion Gene ORF analysis
	Fusion Genomic Features
	Fusion Protein Features
	Fusion Gene Sequence
	Fusion Gene PPI analysis
	Related Drugs
	Related Diseases

Fusion gene:CCDC113-CPNE2 (FusionGDB2 ID:13579)

Fusion Gene Summary for CCDC113-CPNE2

Fusion gene summary

Fusion gene information	Fusion gene name: CCDC113-CPNE2
	Fusion gene ID: 13579
		Hgene	Tgene
	Gene symbol	CCDC113	CPNE2
	Gene ID	29070	221184
	Gene name	coiled-coil domain containing 113	copine 2
	Synonyms	HSPC065	COPN2\|CPN2
	Cytomap	16q21	16q13
	Type of gene	protein-coding	protein-coding
	Description	coiled-coil domain-containing protein 113	copine-2copine II
	Modification date	20200313	20200313
	UniProtAcc	Q9H0I3	Q96FN4
	Ensembl transtripts involved in fusion gene	ENST00000219299, ENST00000443128, ENST00000566498,	ENST00000565951, ENST00000290776, ENST00000535318, ENST00000537605, ENST00000565874,
Fusion gene scores	* DoF score	3 X 3 X 2=18	5 X 4 X 3=60
	# samples	3	5
	** MAII score	log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0	log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: CCDC113 [Title/Abstract] AND CPNE2 [Title/Abstract] AND fusion [Title/Abstract]
Most frequent breakpoint	CCDC113(58301490)-CPNE2(57179997), # samples:3
Anticipated loss of major functional domain due to fusion event.

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene breakpoints across CCDC113 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene breakpoints across CPNE2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Source	Disease	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChimerDB4	CESC	TCGA-EK-A2PM-01A	CCDC113	chr16	58301490	-	CPNE2	chr16	57179997	+
ChimerDB4	CESC	TCGA-EK-A2PM-01A	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+

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Fusion Gene ORF analysis for CCDC113-CPNE2

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
5CDS-3UTR	ENST00000219299	ENST00000565951	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
5CDS-3UTR	ENST00000443128	ENST00000565951	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000219299	ENST00000290776	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000219299	ENST00000535318	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000219299	ENST00000537605	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000219299	ENST00000565874	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000443128	ENST00000290776	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000443128	ENST00000535318	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000443128	ENST00000537605	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
In-frame	ENST00000443128	ENST00000565874	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
intron-3CDS	ENST00000566498	ENST00000290776	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
intron-3CDS	ENST00000566498	ENST00000535318	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
intron-3CDS	ENST00000566498	ENST00000537605	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
intron-3CDS	ENST00000566498	ENST00000565874	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+
intron-3UTR	ENST00000566498	ENST00000565951	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+

ORFfinder result based on the fusion transcript sequence of in-frame fusion genes.

Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	Seq length (transcript)	BP loci (transcript)	Predicted start (transcript)	Predicted stop (transcript)	Seq length (amino acids)
ENST00000219299	CCDC113	chr16	58301490	+	ENST00000290776	CPNE2	chr16	57179997	+	1623	970	79	1314	411
ENST00000219299	CCDC113	chr16	58301490	+	ENST00000537605	CPNE2	chr16	57179997	+	1621	970	79	1314	411
ENST00000219299	CCDC113	chr16	58301490	+	ENST00000535318	CPNE2	chr16	57179997	+	1623	970	79	1314	411
ENST00000219299	CCDC113	chr16	58301490	+	ENST00000565874	CPNE2	chr16	57179997	+	1452	970	79	1314	411
ENST00000443128	CCDC113	chr16	58301490	+	ENST00000290776	CPNE2	chr16	57179997	+	1461	808	79	1152	357
ENST00000443128	CCDC113	chr16	58301490	+	ENST00000537605	CPNE2	chr16	57179997	+	1459	808	79	1152	357
ENST00000443128	CCDC113	chr16	58301490	+	ENST00000535318	CPNE2	chr16	57179997	+	1461	808	79	1152	357
ENST00000443128	CCDC113	chr16	58301490	+	ENST00000565874	CPNE2	chr16	57179997	+	1290	808	79	1152	357

DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.

Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	No-coding score	Coding score
ENST00000219299	ENST00000290776	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.002234155	0.9977659
ENST00000219299	ENST00000537605	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.002227092	0.9977729
ENST00000219299	ENST00000535318	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.002234155	0.9977659
ENST00000219299	ENST00000565874	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.002441932	0.997558
ENST00000443128	ENST00000290776	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.00199195	0.9980081
ENST00000443128	ENST00000537605	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.002007408	0.99799263
ENST00000443128	ENST00000535318	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.00199195	0.9980081
ENST00000443128	ENST00000565874	CCDC113	chr16	58301490	+	CPNE2	chr16	57179997	+	0.002269171	0.9977309

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Fusion Genomic Features for CCDC113-CPNE2

FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.

Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	1-p	p (fusion gene breakpoint)
CCDC113	chr16	58301490	+	CPNE2	chr16	57179996	+	3.18E-07	0.99999964
CCDC113	chr16	58301490	+	CPNE2	chr16	57179996	+	3.18E-07	0.99999964

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for CCDC113-CPNE2

Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr16:58301490/chr16:57179997)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
CCDC113 Q9H0I3	CPNE2 Q96FN4
FUNCTION: Component of centriolar satellites contributing to primary cilium formation. {ECO:0000269\|PubMed:25074808}.	FUNCTION: Calcium-dependent phospholipid-binding protein that plays a role in calcium-mediated intracellular processes. Exhibits calcium-dependent cell membrane binding properties. {ECO:0000250\|UniProtKB:P59108}.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Hgene

CCDC113

chr16:58301490

chr16:57179997

ENST00000219299

95_243

297

378.0

Coiled coil

Ontology_term=ECO:0000255

Hgene

CCDC113

chr16:58301490

chr16:57179997

ENST00000443128

95_243

243

324.0

Coiled coil

Ontology_term=ECO:0000255

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Hgene

CCDC113

chr16:58301490

chr16:57179997

ENST00000219299

280_354

297

378.0

Coiled coil

Ontology_term=ECO:0000255

Hgene

CCDC113

chr16:58301490

chr16:57179997

ENST00000443128

280_354

243

324.0

Coiled coil

Ontology_term=ECO:0000255

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000290776

138_263

434

549.0

Domain

C2 2

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000290776

305_507

434

549.0

Domain

VWFA

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000290776

5_131

434

549.0

Domain

C2 1

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000535318

138_263

434

549.0

Domain

C2 2

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000535318

305_507

434

549.0

Domain

VWFA

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000535318

5_131

434

549.0

Domain

C2 1

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000565874

138_263

434

549.0

Domain

C2 2

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000565874

305_507

434

549.0

Domain

VWFA

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000565874

5_131

434

549.0

Domain

C2 1

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000290776

247_304

434

549.0

Region

Linker region

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000535318

247_304

434

549.0

Region

Linker region

Tgene

CPNE2

chr16:58301490

chr16:57179997

ENST00000565874

247_304

434

549.0

Region

Linker region

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Fusion Gene Sequence for CCDC113-CPNE2

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

>13579_13579_1_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000290776_length(transcript)=1623nt_BP=970nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG
CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG
CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT
TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA
TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG
TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC
CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT
GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT
CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG
CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA
TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT
TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC
TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG
GACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGCCAAACTGGCTTCCTCTCC
TCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGAATAAAATTTTTACAATCA

>13579_13579_1_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000290776_length(amino acids)=411AA_BP=297
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD
RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR
RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI
YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE

--------------------------------------------------------------
>13579_13579_2_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000535318_length(transcript)=1623nt_BP=970nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG
CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG
CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT
TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA
TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG
TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC
CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT
GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT
CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG
CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA
TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT
TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC
TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG
GACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGCCAAACTGGCTTCCTCTCC
TCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGAATAAAATTTTTACAATCA

>13579_13579_2_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000535318_length(amino acids)=411AA_BP=297
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD
RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR
RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI
YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE

--------------------------------------------------------------
>13579_13579_3_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000537605_length(transcript)=1621nt_BP=970nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG
CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG
CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT
TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA
TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG
TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC
CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT
GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT
CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG
CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA
TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT
TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC
TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG
GACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGCCAAACTGGCTTCCTCTCC
TCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGAATAAAATTTTTACAATCA

>13579_13579_3_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000537605_length(amino acids)=411AA_BP=297
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD
RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR
RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI
YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE

--------------------------------------------------------------
>13579_13579_4_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000565874_length(transcript)=1452nt_BP=970nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG
CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG
CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT
TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA
TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG
TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC
CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT
GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT
CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG
CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA
TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT
TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC
TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG

>13579_13579_4_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000219299_CPNE2_chr16_57179997_ENST00000565874_length(amino acids)=411AA_BP=297
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD
RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR
RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI
YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE

--------------------------------------------------------------
>13579_13579_5_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000290776_length(transcript)=1461nt_BP=808nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA
TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT
GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG
GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC
AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT
GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA
GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT
GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG
GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC
GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG
CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT
TTTTATTTTTTACAACCGGACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGC
CAAACTGGCTTCCTCTCCTCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGA

>13579_13579_5_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000290776_length(amino acids)=357AA_BP=243
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS
REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE
TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS

--------------------------------------------------------------
>13579_13579_6_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000535318_length(transcript)=1461nt_BP=808nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA
TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT
GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG
GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC
AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT
GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA
GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT
GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG
GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC
GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG
CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT
TTTTATTTTTTACAACCGGACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGC
CAAACTGGCTTCCTCTCCTCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGA

>13579_13579_6_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000535318_length(amino acids)=357AA_BP=243
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS
REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE
TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS

--------------------------------------------------------------
>13579_13579_7_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000537605_length(transcript)=1459nt_BP=808nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA
TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT
GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG
GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC
AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT
GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA
GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT
GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG
GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC
GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG
CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT
TTTTATTTTTTACAACCGGACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGC
CAAACTGGCTTCCTCTCCTCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGA

>13579_13579_7_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000537605_length(amino acids)=357AA_BP=243
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS
REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE
TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS

--------------------------------------------------------------
>13579_13579_8_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000565874_length(transcript)=1290nt_BP=808nt
GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA
TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG
CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT
ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA
TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT
GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG
GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC
AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT
GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA
GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT
GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG
GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC
GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG
CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT

>13579_13579_8_CCDC113-CPNE2_CCDC113_chr16_58301490_ENST00000443128_CPNE2_chr16_57179997_ENST00000565874_length(amino acids)=357AA_BP=243
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS
REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE
TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for CCDC113-CPNE2

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

Top

Related Drugs for CCDC113-CPNE2

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

Related Diseases for CCDC113-CPNE2

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner

Gene

Disease ID

Disease name

# pubmeds

Source