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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:CEP70-TNFSF10 (FusionGDB2 ID:15888) |
Fusion Gene Summary for CEP70-TNFSF10 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CEP70-TNFSF10 | Fusion gene ID: 15888 | Hgene | Tgene | Gene symbol | CEP70 | TNFSF10 | Gene ID | 80321 | 8743 |
Gene name | centrosomal protein 70 | TNF superfamily member 10 | |
Synonyms | BITE | APO2L|Apo-2L|CD253|TL2|TNLG6A|TRAIL | |
Cytomap | 3q22.3 | 3q26.31 | |
Type of gene | protein-coding | protein-coding | |
Description | centrosomal protein of 70 kDacentrosomal protein 70kDap10-binding proteintesticular tissue protein Li 36 | tumor necrosis factor ligand superfamily member 10Apo-2 ligandTNF-related apoptosis inducing ligand TRAILchemokine tumor necrosis factor ligand superfamily member 10tumor necrosis factor (ligand) family, member 10tumor necrosis factor (ligand) superf | |
Modification date | 20200327 | 20200329 | |
UniProtAcc | Q8NHQ1 | . | |
Ensembl transtripts involved in fusion gene | ENST00000264982, ENST00000484888, ENST00000489254, ENST00000542237, ENST00000464035, ENST00000478673, ENST00000481834, | ENST00000420541, ENST00000241261, | |
Fusion gene scores | * DoF score | 11 X 13 X 6=858 | 5 X 4 X 4=80 |
# samples | 14 | 6 | |
** MAII score | log2(14/858*10)=-2.61555082055458 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/80*10)=-0.415037499278844 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CEP70 [Title/Abstract] AND TNFSF10 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CEP70(138216873)-TNFSF10(172227111), # samples:4 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TNFSF10 | GO:0043065 | positive regulation of apoptotic process | 21525171 |
Tgene | TNFSF10 | GO:0043280 | positive regulation of cysteine-type endopeptidase activity involved in apoptotic process | 21459798|21525171|22266862 |
Tgene | TNFSF10 | GO:0090200 | positive regulation of release of cytochrome c from mitochondria | 22266862 |
Tgene | TNFSF10 | GO:2001238 | positive regulation of extrinsic apoptotic signaling pathway | 20097879|21525171|22266862 |
Fusion gene breakpoints across CEP70 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TNFSF10 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | PRAD | TCGA-V1-A9O5-01A | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
ChimerDB4 | PRAD | TCGA-V1-A9O5-06A | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
ChimerDB4 | PRAD | TCGA-V1-A9O5 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
ChimerDB4 | PRAD | TCGA-V1-A9O5 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
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Fusion Gene ORF analysis for CEP70-TNFSF10 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000264982 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000264982 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000484888 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000484888 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000489254 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000489254 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000542237 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
5CDS-intron | ENST00000542237 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
Frame-shift | ENST00000484888 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
Frame-shift | ENST00000484888 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
In-frame | ENST00000264982 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
In-frame | ENST00000264982 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
In-frame | ENST00000489254 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
In-frame | ENST00000489254 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
In-frame | ENST00000542237 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
In-frame | ENST00000542237 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
intron-3CDS | ENST00000464035 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
intron-3CDS | ENST00000464035 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
intron-3CDS | ENST00000478673 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
intron-3CDS | ENST00000478673 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
intron-3CDS | ENST00000481834 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
intron-3CDS | ENST00000481834 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
intron-intron | ENST00000464035 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
intron-intron | ENST00000464035 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
intron-intron | ENST00000478673 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
intron-intron | ENST00000478673 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
intron-intron | ENST00000481834 | ENST00000420541 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - |
intron-intron | ENST00000481834 | ENST00000420541 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000264982 | CEP70 | chr3 | 138216873 | - | ENST00000241261 | TNFSF10 | chr3 | 172227111 | - | 3516 | 1999 | 267 | 2531 | 754 |
ENST00000542237 | CEP70 | chr3 | 138216873 | - | ENST00000241261 | TNFSF10 | chr3 | 172227111 | - | 3334 | 1817 | 145 | 2349 | 734 |
ENST00000489254 | CEP70 | chr3 | 138216873 | - | ENST00000241261 | TNFSF10 | chr3 | 172227111 | - | 3009 | 1492 | 216 | 2024 | 602 |
ENST00000264982 | CEP70 | chr3 | 138216872 | - | ENST00000241261 | TNFSF10 | chr3 | 172227111 | - | 3516 | 1999 | 267 | 2531 | 754 |
ENST00000542237 | CEP70 | chr3 | 138216872 | - | ENST00000241261 | TNFSF10 | chr3 | 172227111 | - | 3334 | 1817 | 145 | 2349 | 734 |
ENST00000489254 | CEP70 | chr3 | 138216872 | - | ENST00000241261 | TNFSF10 | chr3 | 172227111 | - | 3009 | 1492 | 216 | 2024 | 602 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000264982 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - | 0.00122225 | 0.9987777 |
ENST00000542237 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - | 0.002253624 | 0.9977464 |
ENST00000489254 | ENST00000241261 | CEP70 | chr3 | 138216873 | - | TNFSF10 | chr3 | 172227111 | - | 0.001718565 | 0.9982815 |
ENST00000264982 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - | 0.00122225 | 0.9987777 |
ENST00000542237 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - | 0.002253624 | 0.9977464 |
ENST00000489254 | ENST00000241261 | CEP70 | chr3 | 138216872 | - | TNFSF10 | chr3 | 172227111 | - | 0.001718565 | 0.9982815 |
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Fusion Genomic Features for CEP70-TNFSF10 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CEP70-TNFSF10 |
Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:138216873/chr3:172227111) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CEP70 | . |
FUNCTION: Plays a role in the organization of both preexisting and nascent microtubules in interphase cells. During mitosis, required for the organization and orientation of the mitotic spindle. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000264982 | - | 17 | 18 | 254_326 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000264982 | - | 17 | 18 | 75_179 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000484888 | - | 17 | 18 | 254_326 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000484888 | - | 17 | 18 | 75_179 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000542237 | - | 16 | 17 | 254_326 | 557 | 578.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000542237 | - | 16 | 17 | 75_179 | 557 | 578.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000264982 | - | 17 | 18 | 254_326 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000264982 | - | 17 | 18 | 75_179 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000484888 | - | 17 | 18 | 254_326 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000484888 | - | 17 | 18 | 75_179 | 577 | 598.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000542237 | - | 16 | 17 | 254_326 | 557 | 578.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000542237 | - | 16 | 17 | 75_179 | 557 | 578.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000264982 | - | 17 | 18 | 483_516 | 577 | 598.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000484888 | - | 17 | 18 | 483_516 | 577 | 598.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000542237 | - | 16 | 17 | 483_516 | 557 | 578.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000264982 | - | 17 | 18 | 483_516 | 577 | 598.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000484888 | - | 17 | 18 | 483_516 | 577 | 598.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000542237 | - | 16 | 17 | 483_516 | 557 | 578.0 | Repeat | Note=TPR |
Tgene | TNFSF10 | chr3:138216872 | chr3:172227111 | ENST00000420541 | 0 | 3 | 1_17 | 0 | 102.0 | Topological domain | Cytoplasmic | |
Tgene | TNFSF10 | chr3:138216872 | chr3:172227111 | ENST00000420541 | 0 | 3 | 39_281 | 0 | 102.0 | Topological domain | Extracellular | |
Tgene | TNFSF10 | chr3:138216873 | chr3:172227111 | ENST00000420541 | 0 | 3 | 1_17 | 0 | 102.0 | Topological domain | Cytoplasmic | |
Tgene | TNFSF10 | chr3:138216873 | chr3:172227111 | ENST00000420541 | 0 | 3 | 39_281 | 0 | 102.0 | Topological domain | Extracellular | |
Tgene | TNFSF10 | chr3:138216872 | chr3:172227111 | ENST00000420541 | 0 | 3 | 18_38 | 0 | 102.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein | |
Tgene | TNFSF10 | chr3:138216873 | chr3:172227111 | ENST00000420541 | 0 | 3 | 18_38 | 0 | 102.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000464035 | - | 1 | 6 | 254_326 | 0 | 213.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000464035 | - | 1 | 6 | 75_179 | 0 | 213.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000481834 | - | 1 | 16 | 254_326 | 0 | 555.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000481834 | - | 1 | 16 | 75_179 | 0 | 555.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000464035 | - | 1 | 6 | 254_326 | 0 | 213.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000464035 | - | 1 | 6 | 75_179 | 0 | 213.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000481834 | - | 1 | 16 | 254_326 | 0 | 555.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000481834 | - | 1 | 16 | 75_179 | 0 | 555.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000464035 | - | 1 | 6 | 483_516 | 0 | 213.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216872 | chr3:172227111 | ENST00000481834 | - | 1 | 16 | 483_516 | 0 | 555.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000464035 | - | 1 | 6 | 483_516 | 0 | 213.0 | Repeat | Note=TPR |
Hgene | CEP70 | chr3:138216873 | chr3:172227111 | ENST00000481834 | - | 1 | 16 | 483_516 | 0 | 555.0 | Repeat | Note=TPR |
Tgene | TNFSF10 | chr3:138216872 | chr3:172227111 | ENST00000241261 | 2 | 5 | 1_17 | 104 | 282.0 | Topological domain | Cytoplasmic | |
Tgene | TNFSF10 | chr3:138216872 | chr3:172227111 | ENST00000241261 | 2 | 5 | 39_281 | 104 | 282.0 | Topological domain | Extracellular | |
Tgene | TNFSF10 | chr3:138216873 | chr3:172227111 | ENST00000241261 | 2 | 5 | 1_17 | 104 | 282.0 | Topological domain | Cytoplasmic | |
Tgene | TNFSF10 | chr3:138216873 | chr3:172227111 | ENST00000241261 | 2 | 5 | 39_281 | 104 | 282.0 | Topological domain | Extracellular | |
Tgene | TNFSF10 | chr3:138216872 | chr3:172227111 | ENST00000241261 | 2 | 5 | 18_38 | 104 | 282.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein | |
Tgene | TNFSF10 | chr3:138216873 | chr3:172227111 | ENST00000241261 | 2 | 5 | 18_38 | 104 | 282.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
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Fusion Gene Sequence for CEP70-TNFSF10 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>15888_15888_1_CEP70-TNFSF10_CEP70_chr3_138216872_ENST00000264982_TNFSF10_chr3_172227111_ENST00000241261_length(transcript)=3516nt_BP=1999nt ATTCGCAGGCCAAAGAGGGGCTGGCCCTCGACGCGCTCGGGCTCGATTGGCCGCCCTCCCCCGGCGGTGGTAACGGTCGCGGAGGCGGGG CCTGACGTAGCTGATCCCAGCCTAACCTGGCCCGGCTGGCTGCTGGTGGGAGGCCGGCGACTGAGTAAGATGAAGATCCAGTTTCAGACA TGAGACTCGTTGGGTGATCATTTCATTGAGATCAACCTGAATGACCAGGTGTAAAGTGCAAGAGTAATATGCTATGACTGAGTAACTATG TTTCCGGTAGCCCCTAAACCCCAGGATTCCAGTCAACCATCAGACAGACTCATGACTGAAAAACAGCAGGAAGAAGCAGAATGGGAAAGC ATAAATGTGCTATTGATGATGCATGGCTTAAAACCTTTGTCTCTAGTCAAAAGAACAGATCTCAAAGATCTCATCATTTTTGACAAACAG TCATCACAAAGGATGAGACAGAATTTGAAATTGTTGGTGGAAGAAACATCATGTCAACAGAACATGATACAGGAGCTTATAGAAACTAAT CAACAGCTTAGAAATGAACTTCAGCTAGAGCAAAGCCGAGCAGCCAATCAAGAACAACGAGCTAATGACTTGGAACAAATTATGGAAAGT GTGAAATCCAAAATTGGTGAATTGGAGGATGAATCACTAAGTAGGGCTTGCCACCAACAGAATAAAATAAAAGATCTTCAAAAGGAGCAG AAAACTTTACAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAAACTATTGCTTCTTTGCAAATGGAAGTCTGTAGA TTAAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTATCTGTGCAAAAGAGTTCCTCATACCGTCTTGGATAGA CAGTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAA GAAGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATGTCATTACAGAATCAACTCAAGGAATCAAAATCT AAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGGCCTACGCAGCATGAATTAAGACTTTATAAACAG CAGGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAATTACAGGAGCTTATTAATCATAAGAAGGCTGAGGACACAGAGAAGAAA GATGAGCCCAGCAAATATAATCAGCAACAGGCCCTAATTGACCAGAGATACTTTCAGGTGCTGTGTAGCATCAATTCAATTATCCACAAT CCAAGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAATAAAGATCTTGTTCAAGATTGTGGATTTGAGCAT CTTGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTTGTATAAGTCCTTGAAAACACTATCTGCAGAACTGGTA CCTTGGCTTAATTTGAAGAAGCAGGATGAAAATGAAGGTATCAAAGTTGAAGATTTGTTGTTTATAGTAGATACTATGCTGGAAGAAGTT GAAAATAAGGAAAAGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTTTCTCACTTCCAAAAGTTATTTGATGTGCCTTCT TTAAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAACAATGCTGTGAGAAACCTCCAAGAACTCTTAGAA TTAGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTGGAAAACTCTGTAGGCTGATTAATGAAGATGTGAATGAGCAGGTTATG CAGGTATTAGGACCTGAAGACCTCCAGAGCATTATCTACAAATTGGAAGAACACGAGGAATTTTTCCCAGCATTTCAGGCATTTACTAAT GATCTACTTGAAATCTTAGAAAAGCAACAAAATATTTCTCCCCTAGTGAGAGAAAGAGGTCCTCAGAGAGTAGCAGCTCACATAACTGGG ACCAGAGGAAGAAGCAACACATTGTCTTCTCCAAACTCCAAGAATGAAAAGGCTCTGGGCCGCAAAATAAACTCCTGGGAATCATCAAGG AGTGGGCATTCATTCCTGAGCAACTTGCACTTGAGGAATGGTGAACTGGTCATCCATGAAAAAGGGTTTTACTACATCTATTCCCAAACA TACTTTCGATTTCAGGAGGAAATAAAAGAAAACACAAAGAACGACAAACAAATGGTCCAATATATTTACAAATACACAAGTTATCCTGAC CCTATATTGTTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATGCAGAATATGGACTCTATTCCATCTATCAAGGGGGAATATTT GAGCTTAAGGAAAATGACAGAATTTTTGTTTCTGTAACAAATGAGCACTTGATAGACATGGACCATGAAGCCAGTTTTTTTGGGGCCTTT TTAGTTGGCTAACTGACCTGGAAAGAAAAAGCAATAACCTCAAAGTGACTATTCAGTTTTCAGGATGATACACTATGAAGATGTTTCAAA AAATCTGACCAAAACAAACAAACAGAAAACAGAAAACAAAAAAACCTCTATGCAATCTGAGTAGAGCAGCCACAACCAAAAAATTCTACA ACACACACTGTTCTGAAAGTGACTCACTTATCCCAAGAGAATGAAATTGCTGAAAGATCTTTCAGGACTCTACCTCATATCAGTTTGCTA GCAGAAATCTAGAAGACTGTCAGCTTCCAAACATTAATGCAATGGTTAACATCTTCTGTCTTTATAATCTACTCCTTGTAAAGACTGTAG AAGAAAGAGCAACAATCCATCTCTCAAGTAGTGTATCACAGTAGTAGCCTCCAGGTTTCCTTAAGGGACAACATCCTTAAGTCAAAAGAG AGAAGAGGCACCACTAAAAGATCGCAGTTTGCCTGGTGCAGTGGCTCACACCTGTAATCCCAACATTTTGGGAACCCAAGGTGGGTAGAT CACGAGATCAAGAGATCAAGACCATAGTGACCAACATAGTGAAACCCCATCTCTACTGAAAGTACAAAAATTAGCTGGGTGTGTTGGCAC ATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATTGTTTGAACCCGGGAGGCAGAGGTTGCAGTGTGGTGAGATCATGCCA CTACACTCCAGCCTGGCGACAGAGCGAGACTTGGTTTCAAAAAAAAAAAAAAAAAAAACTTCAGTAAGTACGTGTTATTTTTTTCAATAA AATTCTATTACAGTATGTCATGTTTGCTGTAGTGCTCATATTTATTGTTGTTTTTGTTTTAGTACTCACTTGTTTCATAATATCAAGATT ACTAAAAATGGGGGAAAAGACTTCTAATCTTTTTTTCATAATATCTTTGACACATATTACAGAAGAAATAAATTTCTTACTTTTAATTTA >15888_15888_1_CEP70-TNFSF10_CEP70_chr3_138216872_ENST00000264982_TNFSF10_chr3_172227111_ENST00000241261_length(amino acids)=754AA_BP=576 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDKQSSQRMRQNLKLLVEETSCQQNMIQELIET NQQLRNELQLEQSRAANQEQRANDLEQIMESVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEENDYRNLDASPTYKGLLMSLQNQLKESK SKIDALSSEKLNLQKDLETRPTQHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWLNLKKQDENEGIKVEDLLFIVDTMLEE VENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEKQQNISPLVRERGPQRVAAHITGTRGRSNTLSSPNSKNEKALGRKINSWESS RSGHSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDPILLMKSARNSCWSKDAEYGLYSIYQGGI -------------------------------------------------------------- >15888_15888_2_CEP70-TNFSF10_CEP70_chr3_138216872_ENST00000489254_TNFSF10_chr3_172227111_ENST00000241261_length(transcript)=3009nt_BP=1492nt CGGGCTCGATTGGCCGCCCTCCCCCGGCGGTGGTAACGGTCGCGGAGGCGGGGCCTGACGTAGCTGATCCCAGCCTAACCTGGCCCGGCT GGCTGCTGGTGGGAGGCCGGCGACTGAGTAAGATGAAGATCCAGTTTCAGACATGAGACTCGTTGGGTGATCATTTCATTGAGATCAACC TGAATGACCAGGTGTAAAGTGCAAGAGTAATATGCTATGACTGAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAA ACTATTGCTTCTTTGCAAATGGAAGTCTGTAGATTAAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTATCTG TGCAAAAGAGTTCCTCATACCGTCTTGGATAGACAGTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAA AGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGAAGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATG TCATTACAGAATCAACTCAAGGAATCAAAATCTAAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGG CCTACGCAGCATGAATTAAGACTTTATAAACAGCAGGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAATTACAGGAGCTTATT AATCATAAGAAGGCTGAGGACACAGAGAAGAAAGATGAGCCCAGCAAATATAATCAGCAACAGGCCCTAATTGACCAGAGATACTTTCAG GTGCTGTGTAGCATCAATTCAATTATCCACAATCCAAGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAAT AAAGATCTTGTTCAAGATTGTGGATTTGAGCATCTTGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTTGTAT AAGTCCTTGAAAACACTATCTGCAGAACTGGTACCTTGGCTTAATTTGAAGAAGCAGGATGAAAATGAAGGTATCAAAGTTGAAGATTTG TTGTTTATAGTAGATACTATGCTGGAAGAAGTTGAAAATAAGGAAAAGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTT TCTCACTTCCAAAAGTTATTTGATGTGCCTTCTTTAAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAAC AATGCTGTGAGAAACCTCCAAGAACTCTTAGAATTAGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTGGAAAACTCTGTAGG CTGATTAATGAAGATGTGAATGAGCAGGTTATGCAGGTATTAGGACCTGAAGACCTCCAGAGCATTATCTACAAATTGGAAGAACACGAG GAATTTTTCCCAGCATTTCAGGCATTTACTAATGATCTACTTGAAATCTTAGAAAAGCAACAAAATATTTCTCCCCTAGTGAGAGAAAGA GGTCCTCAGAGAGTAGCAGCTCACATAACTGGGACCAGAGGAAGAAGCAACACATTGTCTTCTCCAAACTCCAAGAATGAAAAGGCTCTG GGCCGCAAAATAAACTCCTGGGAATCATCAAGGAGTGGGCATTCATTCCTGAGCAACTTGCACTTGAGGAATGGTGAACTGGTCATCCAT GAAAAAGGGTTTTACTACATCTATTCCCAAACATACTTTCGATTTCAGGAGGAAATAAAAGAAAACACAAAGAACGACAAACAAATGGTC CAATATATTTACAAATACACAAGTTATCCTGACCCTATATTGTTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATGCAGAATAT GGACTCTATTCCATCTATCAAGGGGGAATATTTGAGCTTAAGGAAAATGACAGAATTTTTGTTTCTGTAACAAATGAGCACTTGATAGAC ATGGACCATGAAGCCAGTTTTTTTGGGGCCTTTTTAGTTGGCTAACTGACCTGGAAAGAAAAAGCAATAACCTCAAAGTGACTATTCAGT TTTCAGGATGATACACTATGAAGATGTTTCAAAAAATCTGACCAAAACAAACAAACAGAAAACAGAAAACAAAAAAACCTCTATGCAATC TGAGTAGAGCAGCCACAACCAAAAAATTCTACAACACACACTGTTCTGAAAGTGACTCACTTATCCCAAGAGAATGAAATTGCTGAAAGA TCTTTCAGGACTCTACCTCATATCAGTTTGCTAGCAGAAATCTAGAAGACTGTCAGCTTCCAAACATTAATGCAATGGTTAACATCTTCT GTCTTTATAATCTACTCCTTGTAAAGACTGTAGAAGAAAGAGCAACAATCCATCTCTCAAGTAGTGTATCACAGTAGTAGCCTCCAGGTT TCCTTAAGGGACAACATCCTTAAGTCAAAAGAGAGAAGAGGCACCACTAAAAGATCGCAGTTTGCCTGGTGCAGTGGCTCACACCTGTAA TCCCAACATTTTGGGAACCCAAGGTGGGTAGATCACGAGATCAAGAGATCAAGACCATAGTGACCAACATAGTGAAACCCCATCTCTACT GAAAGTACAAAAATTAGCTGGGTGTGTTGGCACATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATTGTTTGAACCCGGG AGGCAGAGGTTGCAGTGTGGTGAGATCATGCCACTACACTCCAGCCTGGCGACAGAGCGAGACTTGGTTTCAAAAAAAAAAAAAAAAAAA ACTTCAGTAAGTACGTGTTATTTTTTTCAATAAAATTCTATTACAGTATGTCATGTTTGCTGTAGTGCTCATATTTATTGTTGTTTTTGT TTTAGTACTCACTTGTTTCATAATATCAAGATTACTAAAAATGGGGGAAAAGACTTCTAATCTTTTTTTCATAATATCTTTGACACATAT >15888_15888_2_CEP70-TNFSF10_CEP70_chr3_138216872_ENST00000489254_TNFSF10_chr3_172227111_ENST00000241261_length(amino acids)=602AA_BP=424 MTEVKCQHYKKKRTEQEETIASLQMEVCRLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEE ENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKD EPSKYNQQQALIDQRYFQVLCSINSIIHNPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVP WLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNAVRNLQELLEL DSSSSLCVLVSTVGKLCRLINEDVNEQVMQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEKQQNISPLVRERGPQRVAAHITGT RGRSNTLSSPNSKNEKALGRKINSWESSRSGHSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDP -------------------------------------------------------------- >15888_15888_3_CEP70-TNFSF10_CEP70_chr3_138216872_ENST00000542237_TNFSF10_chr3_172227111_ENST00000241261_length(transcript)=3334nt_BP=1817nt AGCCTAACCTGGCCCGGCTGGCTGCTGGTGGGAGGCCGGCGACTGAGTAAGATGAAGATCCAGTTTCAGACATGAGACTCGTTGGGTGAT CATTTCATTGAGATCAACCTGAATGACCAGGTGTAAAGTGCAAGAGTAATATGCTATGACTGAGCAGGAAGAAGCAGAATGGGAAAGCAT AAATGTGCTATTGATGATGCATGGCTTAAAACCTTTGTCTCTAGTCAAAAGAACAGATCTCAAAGATCTCATCATTTTTGACAAACAGTC ATCACAAAGGATGAGACAGAATTTGAAATTGTTGGTGGAAGAAACATCATGTCAACAGAACATGATACAGGAGCTTATAGAAACTAATCA ACAGCTTAGAAATGAACTTCAGCTAGAGCAAAGCCGAGCAGCCAATCAAGAACAACGAGCTAATGACTTGGAACAAATTATGGAAAGTGT GAAATCCAAAATTGGTGAATTGGAGGATGAATCACTAAGTAGGGCTTGCCACCAACAGAATAAAATAAAAGATCTTCAAAAGGAGCAGAA AACTTTACAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAAACTATTGCTTCTTTGCAAATGGAAGTCTGTAGATT AAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTATCTGTGCAAAAGAGTTCCTCATACCGTCTTGGATAGACA GTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGA AGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATGTCATTACAGAATCAACTCAAGGAATCAAAATCTAA GATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGGCCTACGCAGCATGAATTAAGACTTTATAAACAGCA GGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAATTACAGGAGCTTATTAATCATAAGAAGGCTGAGGACACAGAGAAGAAAGA TGAGCCCAGCAAATATAATCAGCAACAGGCCCTAATTGACCAGAGATACTTTCAGGTGCTGTGTAGCATCAATTCAATTATCCACAATCC AAGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAATAAAGATCTTGTTCAAGATTGTGGATTTGAGCATCT TGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTTGTATAAGTCCTTGAAAACACTATCTGCAGAACTGGTACC TTGGCTTAATTTGAAGAAGCAGGATGAAAATGAAGGTATCAAAGTTGAAGATTTGTTGTTTATAGTAGATACTATGCTGGAAGAAGTTGA AAATAAGGAAAAGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTTTCTCACTTCCAAAAGTTATTTGATGTGCCTTCTTT AAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAACAATGCTGTGAGAAACCTCCAAGAACTCTTAGAATT AGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTGGAAAACTCTGTAGGCTGATTAATGAAGATGTGAATGAGCAGGTTATGCA GGTATTAGGACCTGAAGACCTCCAGAGCATTATCTACAAATTGGAAGAACACGAGGAATTTTTCCCAGCATTTCAGGCATTTACTAATGA TCTACTTGAAATCTTAGAAAAGCAACAAAATATTTCTCCCCTAGTGAGAGAAAGAGGTCCTCAGAGAGTAGCAGCTCACATAACTGGGAC CAGAGGAAGAAGCAACACATTGTCTTCTCCAAACTCCAAGAATGAAAAGGCTCTGGGCCGCAAAATAAACTCCTGGGAATCATCAAGGAG TGGGCATTCATTCCTGAGCAACTTGCACTTGAGGAATGGTGAACTGGTCATCCATGAAAAAGGGTTTTACTACATCTATTCCCAAACATA CTTTCGATTTCAGGAGGAAATAAAAGAAAACACAAAGAACGACAAACAAATGGTCCAATATATTTACAAATACACAAGTTATCCTGACCC TATATTGTTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATGCAGAATATGGACTCTATTCCATCTATCAAGGGGGAATATTTGA GCTTAAGGAAAATGACAGAATTTTTGTTTCTGTAACAAATGAGCACTTGATAGACATGGACCATGAAGCCAGTTTTTTTGGGGCCTTTTT AGTTGGCTAACTGACCTGGAAAGAAAAAGCAATAACCTCAAAGTGACTATTCAGTTTTCAGGATGATACACTATGAAGATGTTTCAAAAA ATCTGACCAAAACAAACAAACAGAAAACAGAAAACAAAAAAACCTCTATGCAATCTGAGTAGAGCAGCCACAACCAAAAAATTCTACAAC ACACACTGTTCTGAAAGTGACTCACTTATCCCAAGAGAATGAAATTGCTGAAAGATCTTTCAGGACTCTACCTCATATCAGTTTGCTAGC AGAAATCTAGAAGACTGTCAGCTTCCAAACATTAATGCAATGGTTAACATCTTCTGTCTTTATAATCTACTCCTTGTAAAGACTGTAGAA GAAAGAGCAACAATCCATCTCTCAAGTAGTGTATCACAGTAGTAGCCTCCAGGTTTCCTTAAGGGACAACATCCTTAAGTCAAAAGAGAG AAGAGGCACCACTAAAAGATCGCAGTTTGCCTGGTGCAGTGGCTCACACCTGTAATCCCAACATTTTGGGAACCCAAGGTGGGTAGATCA CGAGATCAAGAGATCAAGACCATAGTGACCAACATAGTGAAACCCCATCTCTACTGAAAGTACAAAAATTAGCTGGGTGTGTTGGCACAT GCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATTGTTTGAACCCGGGAGGCAGAGGTTGCAGTGTGGTGAGATCATGCCACT ACACTCCAGCCTGGCGACAGAGCGAGACTTGGTTTCAAAAAAAAAAAAAAAAAAAACTTCAGTAAGTACGTGTTATTTTTTTCAATAAAA TTCTATTACAGTATGTCATGTTTGCTGTAGTGCTCATATTTATTGTTGTTTTTGTTTTAGTACTCACTTGTTTCATAATATCAAGATTAC TAAAAATGGGGGAAAAGACTTCTAATCTTTTTTTCATAATATCTTTGACACATATTACAGAAGAAATAAATTTCTTACTTTTAATTTAAT >15888_15888_3_CEP70-TNFSF10_CEP70_chr3_138216872_ENST00000542237_TNFSF10_chr3_172227111_ENST00000241261_length(amino acids)=734AA_BP=556 MTEQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDKQSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQ RANDLEQIMESVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVCRLKKEEEDRIVTQNRVFAYL CKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETR PTQHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNPRAPVIIYKQTKGGVQNFN KDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIV SHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVLGPEDLQSIIYKLEEHE EFFPAFQAFTNDLLEILEKQQNISPLVRERGPQRVAAHITGTRGRSNTLSSPNSKNEKALGRKINSWESSRSGHSFLSNLHLRNGELVIH EKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDPILLMKSARNSCWSKDAEYGLYSIYQGGIFELKENDRIFVSVTNEHLID -------------------------------------------------------------- >15888_15888_4_CEP70-TNFSF10_CEP70_chr3_138216873_ENST00000264982_TNFSF10_chr3_172227111_ENST00000241261_length(transcript)=3516nt_BP=1999nt ATTCGCAGGCCAAAGAGGGGCTGGCCCTCGACGCGCTCGGGCTCGATTGGCCGCCCTCCCCCGGCGGTGGTAACGGTCGCGGAGGCGGGG CCTGACGTAGCTGATCCCAGCCTAACCTGGCCCGGCTGGCTGCTGGTGGGAGGCCGGCGACTGAGTAAGATGAAGATCCAGTTTCAGACA TGAGACTCGTTGGGTGATCATTTCATTGAGATCAACCTGAATGACCAGGTGTAAAGTGCAAGAGTAATATGCTATGACTGAGTAACTATG TTTCCGGTAGCCCCTAAACCCCAGGATTCCAGTCAACCATCAGACAGACTCATGACTGAAAAACAGCAGGAAGAAGCAGAATGGGAAAGC ATAAATGTGCTATTGATGATGCATGGCTTAAAACCTTTGTCTCTAGTCAAAAGAACAGATCTCAAAGATCTCATCATTTTTGACAAACAG TCATCACAAAGGATGAGACAGAATTTGAAATTGTTGGTGGAAGAAACATCATGTCAACAGAACATGATACAGGAGCTTATAGAAACTAAT CAACAGCTTAGAAATGAACTTCAGCTAGAGCAAAGCCGAGCAGCCAATCAAGAACAACGAGCTAATGACTTGGAACAAATTATGGAAAGT GTGAAATCCAAAATTGGTGAATTGGAGGATGAATCACTAAGTAGGGCTTGCCACCAACAGAATAAAATAAAAGATCTTCAAAAGGAGCAG AAAACTTTACAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAAACTATTGCTTCTTTGCAAATGGAAGTCTGTAGA TTAAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTATCTGTGCAAAAGAGTTCCTCATACCGTCTTGGATAGA CAGTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAA GAAGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATGTCATTACAGAATCAACTCAAGGAATCAAAATCT AAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGGCCTACGCAGCATGAATTAAGACTTTATAAACAG CAGGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAATTACAGGAGCTTATTAATCATAAGAAGGCTGAGGACACAGAGAAGAAA GATGAGCCCAGCAAATATAATCAGCAACAGGCCCTAATTGACCAGAGATACTTTCAGGTGCTGTGTAGCATCAATTCAATTATCCACAAT CCAAGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAATAAAGATCTTGTTCAAGATTGTGGATTTGAGCAT CTTGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTTGTATAAGTCCTTGAAAACACTATCTGCAGAACTGGTA CCTTGGCTTAATTTGAAGAAGCAGGATGAAAATGAAGGTATCAAAGTTGAAGATTTGTTGTTTATAGTAGATACTATGCTGGAAGAAGTT GAAAATAAGGAAAAGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTTTCTCACTTCCAAAAGTTATTTGATGTGCCTTCT TTAAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAACAATGCTGTGAGAAACCTCCAAGAACTCTTAGAA TTAGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTGGAAAACTCTGTAGGCTGATTAATGAAGATGTGAATGAGCAGGTTATG CAGGTATTAGGACCTGAAGACCTCCAGAGCATTATCTACAAATTGGAAGAACACGAGGAATTTTTCCCAGCATTTCAGGCATTTACTAAT GATCTACTTGAAATCTTAGAAAAGCAACAAAATATTTCTCCCCTAGTGAGAGAAAGAGGTCCTCAGAGAGTAGCAGCTCACATAACTGGG ACCAGAGGAAGAAGCAACACATTGTCTTCTCCAAACTCCAAGAATGAAAAGGCTCTGGGCCGCAAAATAAACTCCTGGGAATCATCAAGG AGTGGGCATTCATTCCTGAGCAACTTGCACTTGAGGAATGGTGAACTGGTCATCCATGAAAAAGGGTTTTACTACATCTATTCCCAAACA TACTTTCGATTTCAGGAGGAAATAAAAGAAAACACAAAGAACGACAAACAAATGGTCCAATATATTTACAAATACACAAGTTATCCTGAC CCTATATTGTTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATGCAGAATATGGACTCTATTCCATCTATCAAGGGGGAATATTT GAGCTTAAGGAAAATGACAGAATTTTTGTTTCTGTAACAAATGAGCACTTGATAGACATGGACCATGAAGCCAGTTTTTTTGGGGCCTTT TTAGTTGGCTAACTGACCTGGAAAGAAAAAGCAATAACCTCAAAGTGACTATTCAGTTTTCAGGATGATACACTATGAAGATGTTTCAAA AAATCTGACCAAAACAAACAAACAGAAAACAGAAAACAAAAAAACCTCTATGCAATCTGAGTAGAGCAGCCACAACCAAAAAATTCTACA ACACACACTGTTCTGAAAGTGACTCACTTATCCCAAGAGAATGAAATTGCTGAAAGATCTTTCAGGACTCTACCTCATATCAGTTTGCTA GCAGAAATCTAGAAGACTGTCAGCTTCCAAACATTAATGCAATGGTTAACATCTTCTGTCTTTATAATCTACTCCTTGTAAAGACTGTAG AAGAAAGAGCAACAATCCATCTCTCAAGTAGTGTATCACAGTAGTAGCCTCCAGGTTTCCTTAAGGGACAACATCCTTAAGTCAAAAGAG AGAAGAGGCACCACTAAAAGATCGCAGTTTGCCTGGTGCAGTGGCTCACACCTGTAATCCCAACATTTTGGGAACCCAAGGTGGGTAGAT CACGAGATCAAGAGATCAAGACCATAGTGACCAACATAGTGAAACCCCATCTCTACTGAAAGTACAAAAATTAGCTGGGTGTGTTGGCAC ATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATTGTTTGAACCCGGGAGGCAGAGGTTGCAGTGTGGTGAGATCATGCCA CTACACTCCAGCCTGGCGACAGAGCGAGACTTGGTTTCAAAAAAAAAAAAAAAAAAAACTTCAGTAAGTACGTGTTATTTTTTTCAATAA AATTCTATTACAGTATGTCATGTTTGCTGTAGTGCTCATATTTATTGTTGTTTTTGTTTTAGTACTCACTTGTTTCATAATATCAAGATT ACTAAAAATGGGGGAAAAGACTTCTAATCTTTTTTTCATAATATCTTTGACACATATTACAGAAGAAATAAATTTCTTACTTTTAATTTA >15888_15888_4_CEP70-TNFSF10_CEP70_chr3_138216873_ENST00000264982_TNFSF10_chr3_172227111_ENST00000241261_length(amino acids)=754AA_BP=576 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDKQSSQRMRQNLKLLVEETSCQQNMIQELIET NQQLRNELQLEQSRAANQEQRANDLEQIMESVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEENDYRNLDASPTYKGLLMSLQNQLKESK SKIDALSSEKLNLQKDLETRPTQHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWLNLKKQDENEGIKVEDLLFIVDTMLEE VENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEKQQNISPLVRERGPQRVAAHITGTRGRSNTLSSPNSKNEKALGRKINSWESS RSGHSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDPILLMKSARNSCWSKDAEYGLYSIYQGGI -------------------------------------------------------------- >15888_15888_5_CEP70-TNFSF10_CEP70_chr3_138216873_ENST00000489254_TNFSF10_chr3_172227111_ENST00000241261_length(transcript)=3009nt_BP=1492nt CGGGCTCGATTGGCCGCCCTCCCCCGGCGGTGGTAACGGTCGCGGAGGCGGGGCCTGACGTAGCTGATCCCAGCCTAACCTGGCCCGGCT GGCTGCTGGTGGGAGGCCGGCGACTGAGTAAGATGAAGATCCAGTTTCAGACATGAGACTCGTTGGGTGATCATTTCATTGAGATCAACC TGAATGACCAGGTGTAAAGTGCAAGAGTAATATGCTATGACTGAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAA ACTATTGCTTCTTTGCAAATGGAAGTCTGTAGATTAAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTATCTG TGCAAAAGAGTTCCTCATACCGTCTTGGATAGACAGTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAA AGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGAAGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATG TCATTACAGAATCAACTCAAGGAATCAAAATCTAAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGG CCTACGCAGCATGAATTAAGACTTTATAAACAGCAGGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAATTACAGGAGCTTATT AATCATAAGAAGGCTGAGGACACAGAGAAGAAAGATGAGCCCAGCAAATATAATCAGCAACAGGCCCTAATTGACCAGAGATACTTTCAG GTGCTGTGTAGCATCAATTCAATTATCCACAATCCAAGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAAT AAAGATCTTGTTCAAGATTGTGGATTTGAGCATCTTGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTTGTAT AAGTCCTTGAAAACACTATCTGCAGAACTGGTACCTTGGCTTAATTTGAAGAAGCAGGATGAAAATGAAGGTATCAAAGTTGAAGATTTG TTGTTTATAGTAGATACTATGCTGGAAGAAGTTGAAAATAAGGAAAAGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTT TCTCACTTCCAAAAGTTATTTGATGTGCCTTCTTTAAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAAC AATGCTGTGAGAAACCTCCAAGAACTCTTAGAATTAGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTGGAAAACTCTGTAGG CTGATTAATGAAGATGTGAATGAGCAGGTTATGCAGGTATTAGGACCTGAAGACCTCCAGAGCATTATCTACAAATTGGAAGAACACGAG GAATTTTTCCCAGCATTTCAGGCATTTACTAATGATCTACTTGAAATCTTAGAAAAGCAACAAAATATTTCTCCCCTAGTGAGAGAAAGA GGTCCTCAGAGAGTAGCAGCTCACATAACTGGGACCAGAGGAAGAAGCAACACATTGTCTTCTCCAAACTCCAAGAATGAAAAGGCTCTG GGCCGCAAAATAAACTCCTGGGAATCATCAAGGAGTGGGCATTCATTCCTGAGCAACTTGCACTTGAGGAATGGTGAACTGGTCATCCAT GAAAAAGGGTTTTACTACATCTATTCCCAAACATACTTTCGATTTCAGGAGGAAATAAAAGAAAACACAAAGAACGACAAACAAATGGTC CAATATATTTACAAATACACAAGTTATCCTGACCCTATATTGTTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATGCAGAATAT GGACTCTATTCCATCTATCAAGGGGGAATATTTGAGCTTAAGGAAAATGACAGAATTTTTGTTTCTGTAACAAATGAGCACTTGATAGAC ATGGACCATGAAGCCAGTTTTTTTGGGGCCTTTTTAGTTGGCTAACTGACCTGGAAAGAAAAAGCAATAACCTCAAAGTGACTATTCAGT TTTCAGGATGATACACTATGAAGATGTTTCAAAAAATCTGACCAAAACAAACAAACAGAAAACAGAAAACAAAAAAACCTCTATGCAATC TGAGTAGAGCAGCCACAACCAAAAAATTCTACAACACACACTGTTCTGAAAGTGACTCACTTATCCCAAGAGAATGAAATTGCTGAAAGA TCTTTCAGGACTCTACCTCATATCAGTTTGCTAGCAGAAATCTAGAAGACTGTCAGCTTCCAAACATTAATGCAATGGTTAACATCTTCT GTCTTTATAATCTACTCCTTGTAAAGACTGTAGAAGAAAGAGCAACAATCCATCTCTCAAGTAGTGTATCACAGTAGTAGCCTCCAGGTT TCCTTAAGGGACAACATCCTTAAGTCAAAAGAGAGAAGAGGCACCACTAAAAGATCGCAGTTTGCCTGGTGCAGTGGCTCACACCTGTAA TCCCAACATTTTGGGAACCCAAGGTGGGTAGATCACGAGATCAAGAGATCAAGACCATAGTGACCAACATAGTGAAACCCCATCTCTACT GAAAGTACAAAAATTAGCTGGGTGTGTTGGCACATGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATTGTTTGAACCCGGG AGGCAGAGGTTGCAGTGTGGTGAGATCATGCCACTACACTCCAGCCTGGCGACAGAGCGAGACTTGGTTTCAAAAAAAAAAAAAAAAAAA ACTTCAGTAAGTACGTGTTATTTTTTTCAATAAAATTCTATTACAGTATGTCATGTTTGCTGTAGTGCTCATATTTATTGTTGTTTTTGT TTTAGTACTCACTTGTTTCATAATATCAAGATTACTAAAAATGGGGGAAAAGACTTCTAATCTTTTTTTCATAATATCTTTGACACATAT >15888_15888_5_CEP70-TNFSF10_CEP70_chr3_138216873_ENST00000489254_TNFSF10_chr3_172227111_ENST00000241261_length(amino acids)=602AA_BP=424 MTEVKCQHYKKKRTEQEETIASLQMEVCRLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEE ENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKD EPSKYNQQQALIDQRYFQVLCSINSIIHNPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVP WLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNAVRNLQELLEL DSSSSLCVLVSTVGKLCRLINEDVNEQVMQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEKQQNISPLVRERGPQRVAAHITGT RGRSNTLSSPNSKNEKALGRKINSWESSRSGHSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDP -------------------------------------------------------------- >15888_15888_6_CEP70-TNFSF10_CEP70_chr3_138216873_ENST00000542237_TNFSF10_chr3_172227111_ENST00000241261_length(transcript)=3334nt_BP=1817nt AGCCTAACCTGGCCCGGCTGGCTGCTGGTGGGAGGCCGGCGACTGAGTAAGATGAAGATCCAGTTTCAGACATGAGACTCGTTGGGTGAT CATTTCATTGAGATCAACCTGAATGACCAGGTGTAAAGTGCAAGAGTAATATGCTATGACTGAGCAGGAAGAAGCAGAATGGGAAAGCAT AAATGTGCTATTGATGATGCATGGCTTAAAACCTTTGTCTCTAGTCAAAAGAACAGATCTCAAAGATCTCATCATTTTTGACAAACAGTC ATCACAAAGGATGAGACAGAATTTGAAATTGTTGGTGGAAGAAACATCATGTCAACAGAACATGATACAGGAGCTTATAGAAACTAATCA ACAGCTTAGAAATGAACTTCAGCTAGAGCAAAGCCGAGCAGCCAATCAAGAACAACGAGCTAATGACTTGGAACAAATTATGGAAAGTGT GAAATCCAAAATTGGTGAATTGGAGGATGAATCACTAAGTAGGGCTTGCCACCAACAGAATAAAATAAAAGATCTTCAAAAGGAGCAGAA AACTTTACAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAAACTATTGCTTCTTTGCAAATGGAAGTCTGTAGATT AAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTATCTGTGCAAAAGAGTTCCTCATACCGTCTTGGATAGACA GTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGA AGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATGTCATTACAGAATCAACTCAAGGAATCAAAATCTAA GATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGGCCTACGCAGCATGAATTAAGACTTTATAAACAGCA GGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAATTACAGGAGCTTATTAATCATAAGAAGGCTGAGGACACAGAGAAGAAAGA TGAGCCCAGCAAATATAATCAGCAACAGGCCCTAATTGACCAGAGATACTTTCAGGTGCTGTGTAGCATCAATTCAATTATCCACAATCC AAGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAATAAAGATCTTGTTCAAGATTGTGGATTTGAGCATCT TGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTTGTATAAGTCCTTGAAAACACTATCTGCAGAACTGGTACC TTGGCTTAATTTGAAGAAGCAGGATGAAAATGAAGGTATCAAAGTTGAAGATTTGTTGTTTATAGTAGATACTATGCTGGAAGAAGTTGA AAATAAGGAAAAGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTTTCTCACTTCCAAAAGTTATTTGATGTGCCTTCTTT AAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAACAATGCTGTGAGAAACCTCCAAGAACTCTTAGAATT AGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTGGAAAACTCTGTAGGCTGATTAATGAAGATGTGAATGAGCAGGTTATGCA GGTATTAGGACCTGAAGACCTCCAGAGCATTATCTACAAATTGGAAGAACACGAGGAATTTTTCCCAGCATTTCAGGCATTTACTAATGA TCTACTTGAAATCTTAGAAAAGCAACAAAATATTTCTCCCCTAGTGAGAGAAAGAGGTCCTCAGAGAGTAGCAGCTCACATAACTGGGAC CAGAGGAAGAAGCAACACATTGTCTTCTCCAAACTCCAAGAATGAAAAGGCTCTGGGCCGCAAAATAAACTCCTGGGAATCATCAAGGAG TGGGCATTCATTCCTGAGCAACTTGCACTTGAGGAATGGTGAACTGGTCATCCATGAAAAAGGGTTTTACTACATCTATTCCCAAACATA CTTTCGATTTCAGGAGGAAATAAAAGAAAACACAAAGAACGACAAACAAATGGTCCAATATATTTACAAATACACAAGTTATCCTGACCC TATATTGTTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATGCAGAATATGGACTCTATTCCATCTATCAAGGGGGAATATTTGA GCTTAAGGAAAATGACAGAATTTTTGTTTCTGTAACAAATGAGCACTTGATAGACATGGACCATGAAGCCAGTTTTTTTGGGGCCTTTTT AGTTGGCTAACTGACCTGGAAAGAAAAAGCAATAACCTCAAAGTGACTATTCAGTTTTCAGGATGATACACTATGAAGATGTTTCAAAAA ATCTGACCAAAACAAACAAACAGAAAACAGAAAACAAAAAAACCTCTATGCAATCTGAGTAGAGCAGCCACAACCAAAAAATTCTACAAC ACACACTGTTCTGAAAGTGACTCACTTATCCCAAGAGAATGAAATTGCTGAAAGATCTTTCAGGACTCTACCTCATATCAGTTTGCTAGC AGAAATCTAGAAGACTGTCAGCTTCCAAACATTAATGCAATGGTTAACATCTTCTGTCTTTATAATCTACTCCTTGTAAAGACTGTAGAA GAAAGAGCAACAATCCATCTCTCAAGTAGTGTATCACAGTAGTAGCCTCCAGGTTTCCTTAAGGGACAACATCCTTAAGTCAAAAGAGAG AAGAGGCACCACTAAAAGATCGCAGTTTGCCTGGTGCAGTGGCTCACACCTGTAATCCCAACATTTTGGGAACCCAAGGTGGGTAGATCA CGAGATCAAGAGATCAAGACCATAGTGACCAACATAGTGAAACCCCATCTCTACTGAAAGTACAAAAATTAGCTGGGTGTGTTGGCACAT GCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAAGAGAATTGTTTGAACCCGGGAGGCAGAGGTTGCAGTGTGGTGAGATCATGCCACT ACACTCCAGCCTGGCGACAGAGCGAGACTTGGTTTCAAAAAAAAAAAAAAAAAAAACTTCAGTAAGTACGTGTTATTTTTTTCAATAAAA TTCTATTACAGTATGTCATGTTTGCTGTAGTGCTCATATTTATTGTTGTTTTTGTTTTAGTACTCACTTGTTTCATAATATCAAGATTAC TAAAAATGGGGGAAAAGACTTCTAATCTTTTTTTCATAATATCTTTGACACATATTACAGAAGAAATAAATTTCTTACTTTTAATTTAAT >15888_15888_6_CEP70-TNFSF10_CEP70_chr3_138216873_ENST00000542237_TNFSF10_chr3_172227111_ENST00000241261_length(amino acids)=734AA_BP=556 MTEQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDKQSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQ RANDLEQIMESVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVCRLKKEEEDRIVTQNRVFAYL CKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETR PTQHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNPRAPVIIYKQTKGGVQNFN KDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIV SHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVLGPEDLQSIIYKLEEHE EFFPAFQAFTNDLLEILEKQQNISPLVRERGPQRVAAHITGTRGRSNTLSSPNSKNEKALGRKINSWESSRSGHSFLSNLHLRNGELVIH EKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDPILLMKSARNSCWSKDAEYGLYSIYQGGIFELKENDRIFVSVTNEHLID -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CEP70-TNFSF10 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CEP70-TNFSF10 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CEP70-TNFSF10 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |