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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:CHID1-LSP1 (FusionGDB2 ID:16492)

Fusion Gene Summary for CHID1-LSP1

check button Fusion gene summary
Fusion gene informationFusion gene name: CHID1-LSP1
Fusion gene ID: 16492
HgeneTgene
Gene symbol

CHID1

LSP1

Gene ID

66005

4046

Gene namechitinase domain containing 1lymphocyte specific protein 1
SynonymsGL008|SI-CLP|SICLPWP34|pp52
Cytomap

11p15.5

11p15.5

Type of geneprotein-codingprotein-coding
Descriptionchitinase domain-containing protein 1stabilin-1 interacting chitinase-like proteinlymphocyte-specific protein 147 kDa actin binding protein52 kDa phosphoproteinF-actin binding and cytoskeleton associated proteinleufactin (leukocyte F-actin binding protein)leukocyte-specific protein 1lymphocyte-specific antigen WP34
Modification date2020031320200313
UniProtAcc

Q9BWS9

P33241

Ensembl transtripts involved in fusion geneENST00000323541, ENST00000323578, 
ENST00000336845, ENST00000429789, 
ENST00000436108, ENST00000449825, 
ENST00000454838, ENST00000528581, 
ENST00000526714, 		ENST00000405957, 
ENST00000406638, ENST00000485341, 
ENST00000599825, ENST00000311604, 
ENST00000381775, 
Fusion gene scores* DoF score4 X 4 X 4=649 X 7 X 4=252
# samples 410
** MAII scorelog2(4/64*10)=-0.678071905112638
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(10/252*10)=-1.33342373372519
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: CHID1 [Title/Abstract] AND LSP1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCHID1(899339)-LSP1(1901316), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCHID1

GO:1900016

negative regulation of cytokine production involved in inflammatory response

20724479


check buttonFusion gene breakpoints across CHID1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check buttonFusion gene breakpoints across LSP1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4ACCTCGA-OR-A5JXCHID1chr11

899339

-LSP1chr11

1901316

+


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Fusion Gene ORF analysis for CHID1-LSP1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000323541ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000323541ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000323578ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000323578ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000336845ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000336845ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000429789ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000429789ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000436108ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000436108ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000449825ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000449825ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000454838ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000454838ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000528581ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-5UTRENST00000528581ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000323541ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000323541ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000323578ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000323578ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000336845ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000336845ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000429789ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000429789ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000436108ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000436108ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000449825ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000449825ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000454838ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000454838ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000528581ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5CDS-intronENST00000528581ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
5UTR-3CDSENST00000526714ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
5UTR-3CDSENST00000526714ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
5UTR-5UTRENST00000526714ENST00000405957CHID1chr11

899339

-LSP1chr11

1901316

+
5UTR-5UTRENST00000526714ENST00000406638CHID1chr11

899339

-LSP1chr11

1901316

+
5UTR-intronENST00000526714ENST00000485341CHID1chr11

899339

-LSP1chr11

1901316

+
5UTR-intronENST00000526714ENST00000599825CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000323541ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000323541ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000323578ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000323578ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000429789ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000429789ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000528581ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
Frame-shiftENST00000528581ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000336845ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000336845ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000436108ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000436108ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000449825ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000449825ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000454838ENST00000311604CHID1chr11

899339

-LSP1chr11

1901316

+
In-frameENST00000454838ENST00000381775CHID1chr11

899339

-LSP1chr11

1901316

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000454838CHID1chr11899339-ENST00000311604LSP1chr111901316+2261790171756579
ENST00000454838CHID1chr11899339-ENST00000381775LSP1chr111901316+2261790171756579
ENST00000449825CHID1chr11899339-ENST00000311604LSP1chr111901316+2436965991931610
ENST00000449825CHID1chr11899339-ENST00000381775LSP1chr111901316+2436965991931610
ENST00000336845CHID1chr11899339-ENST00000311604LSP1chr111901316+23358641301830566
ENST00000336845CHID1chr11899339-ENST00000381775LSP1chr111901316+23358641301830566
ENST00000436108CHID1chr11899339-ENST00000311604LSP1chr111901316+22838121531778541
ENST00000436108CHID1chr11899339-ENST00000381775LSP1chr111901316+22838121531778541

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000454838ENST00000311604CHID1chr11899339-LSP1chr111901316+0.0155095670.98449045
ENST00000454838ENST00000381775CHID1chr11899339-LSP1chr111901316+0.0155095670.98449045
ENST00000449825ENST00000311604CHID1chr11899339-LSP1chr111901316+0.0087168060.9912832
ENST00000449825ENST00000381775CHID1chr11899339-LSP1chr111901316+0.0087168060.9912832
ENST00000336845ENST00000311604CHID1chr11899339-LSP1chr111901316+0.0151946840.9848053
ENST00000336845ENST00000381775CHID1chr11899339-LSP1chr111901316+0.0151946840.9848053
ENST00000436108ENST00000311604CHID1chr11899339-LSP1chr111901316+0.0099223890.9900776
ENST00000436108ENST00000381775CHID1chr11899339-LSP1chr111901316+0.0099223890.9900776

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Fusion Genomic Features for CHID1-LSP1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
CHID1chr11899339-LSP1chr111901316+3.84E-060.9999962
CHID1chr11899339-LSP1chr111901316+3.84E-060.9999962

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

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Fusion Protein Features for CHID1-LSP1


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr11:899339/chr11:1901316)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CHID1

Q9BWS9

LSP1

P33241

FUNCTION: Saccharide- and LPS-binding protein with possible roles in pathogen sensing and endotoxin neutralization. Ligand-binding specificity relates to the length of the oligosaccharides, with preference for chitotetraose (in vitro). {ECO:0000269|PubMed:20724479}.FUNCTION: May play a role in mediating neutrophil activation and chemotaxis. {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCHID1chr11:899339chr11:1901316ENST00000323578-71379_393202394.0DomainGH18
HgeneCHID1chr11:899339chr11:1901316ENST00000336845-91579_393227419.0DomainGH18
HgeneCHID1chr11:899339chr11:1901316ENST00000429789-71279_393202363.0DomainGH18
HgeneCHID1chr11:899339chr11:1901316ENST00000436108-81479_393202394.0DomainGH18
HgeneCHID1chr11:899339chr11:1901316ENST00000449825-71379_393202394.0DomainGH18
HgeneCHID1chr11:899339chr11:1901316ENST00000454838-71379_393227419.0DomainGH18
HgeneCHID1chr11:899339chr11:1901316ENST00000528581-81479_393227419.0DomainGH18


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Fusion Gene Sequence for CHID1-LSP1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>16492_16492_1_CHID1-LSP1_CHID1_chr11_899339_ENST00000336845_LSP1_chr11_1901316_ENST00000311604_length(transcript)=2335nt_BP=864nt
GCGTTTGTGGCCGTCCGGCCTCCCTGACATGCAGATTTCCACCCAGAAGACAGAGAAGGAGCCAGTGGTCATGGAATGGGCTGGGGTCAA
AGACTGGGTGCCTGGGAGCTGAGGCAGCCACCGTTTCAGCCTGGCCAGCCCTCTGGACCCCGAGGTTGGACCCTACTGTGACACACCTAC
CATGCGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAAGTCAGATGCCAAAAAAGCCGC
CTCAAAGACGCTGCTGGAGAAGGTGAAGTTTTGCTCTTGTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGGCTCACCGCAACCTCTGC
CACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTGACGGACCTCAAAGCTGAGAGTGTGGTTCTTGAGCATCG
CAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACAGCCATGGCTACGATGT
CACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGG
CCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTG
GACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCA
TTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGCCCACTGCTCAGTGGAGCGTGGAGGACGAGGAGGA
GGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAGGACGAGGAGGGAGGCGGCCATGTCCCCGAGCGGCCGAA
GCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGACTGGTCCCAGAGGCCAGAGCA
GCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCCCAGTGCAGGAGTCCTGAGGGGGAGCAAGAGGACAGGCC
CGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGCCAGGCCCAGAGGACAC
TGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCACCAGAAATGTCAGCAGCCCAGGACACCCAGCCCCTTGGT
CTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAACTCATCGACAGGACCGAGTCCCTAAACCGCTCCATAGA
GAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATTGATCAGTGGCTGGAACAATACACCCAGGCCATCGAGAC
CGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGTGGCCAGTACCAAGAGTCGGTGGGAGACGGG
TGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTGGCTGGAGACATGAGCAAGAAAAGCCTCTGGGAGCAGAA
GGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGGTATAAGTTTGTGGCCACCGGGCATGGGAAGTATGAGAA
GGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGGGTCTGCAGGTCCAGCCGGCTGGCACCCTCCATGTACCC
AGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCTTCCTGTTGCCAGCATGACCTACCCTCGCCTCTTTGATG
CCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTTCCACTCTCTGACCACCGCCCCCGCCCTCCCCACCCAGC
TCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAGGGACTTACCCCTGGAGAGGCCAAGTGCCTTCTAGGAAG
TTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGATCCAAGGAGAAACTGCAGGTCAAGGGCTGATAACGGCCA

>16492_16492_1_CHID1-LSP1_CHID1_chr11_899339_ENST00000336845_LSP1_chr11_1901316_ENST00000311604_length(amino acids)=566AA_BP=56
MASPLDPEVGPYCDTPTMRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKVKFCSCCPGWSAMARSWLTATSATQSQFSDKPVQDR
GLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVR
KHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVPTAQWSVEDEEEAVHEQCQHERDRQ
LQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV
HLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLP
ISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIKSTP

--------------------------------------------------------------
>16492_16492_2_CHID1-LSP1_CHID1_chr11_899339_ENST00000336845_LSP1_chr11_1901316_ENST00000381775_length(transcript)=2335nt_BP=864nt
GCGTTTGTGGCCGTCCGGCCTCCCTGACATGCAGATTTCCACCCAGAAGACAGAGAAGGAGCCAGTGGTCATGGAATGGGCTGGGGTCAA
AGACTGGGTGCCTGGGAGCTGAGGCAGCCACCGTTTCAGCCTGGCCAGCCCTCTGGACCCCGAGGTTGGACCCTACTGTGACACACCTAC
CATGCGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAAGTCAGATGCCAAAAAAGCCGC
CTCAAAGACGCTGCTGGAGAAGGTGAAGTTTTGCTCTTGTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGGCTCACCGCAACCTCTGC
CACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTGACGGACCTCAAAGCTGAGAGTGTGGTTCTTGAGCATCG
CAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACAGCCATGGCTACGATGT
CACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGG
CCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTG
GACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCA
TTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGCCCACTGCTCAGTGGAGCGTGGAGGACGAGGAGGA
GGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAGGACGAGGAGGGAGGCGGCCATGTCCCCGAGCGGCCGAA
GCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGACTGGTCCCAGAGGCCAGAGCA
GCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCCCAGTGCAGGAGTCCTGAGGGGGAGCAAGAGGACAGGCC
CGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGCCAGGCCCAGAGGACAC
TGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCACCAGAAATGTCAGCAGCCCAGGACACCCAGCCCCTTGGT
CTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAACTCATCGACAGGACCGAGTCCCTAAACCGCTCCATAGA
GAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATTGATCAGTGGCTGGAACAATACACCCAGGCCATCGAGAC
CGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGTGGCCAGTACCAAGAGTCGGTGGGAGACGGG
TGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTGGCTGGAGACATGAGCAAGAAAAGCCTCTGGGAGCAGAA
GGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGGTATAAGTTTGTGGCCACCGGGCATGGGAAGTATGAGAA
GGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGGGTCTGCAGGTCCAGCCGGCTGGCACCCTCCATGTACCC
AGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCTTCCTGTTGCCAGCATGACCTACCCTCGCCTCTTTGATG
CCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTTCCACTCTCTGACCACCGCCCCCGCCCTCCCCACCCAGC
TCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAGGGACTTACCCCTGGAGAGGCCAAGTGCCTTCTAGGAAG
TTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGATCCAAGGAGAAACTGCAGGTCAAGGGCTGATAACGGCCA

>16492_16492_2_CHID1-LSP1_CHID1_chr11_899339_ENST00000336845_LSP1_chr11_1901316_ENST00000381775_length(amino acids)=566AA_BP=56
MASPLDPEVGPYCDTPTMRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKVKFCSCCPGWSAMARSWLTATSATQSQFSDKPVQDR
GLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVR
KHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVPTAQWSVEDEEEAVHEQCQHERDRQ
LQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV
HLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLP
ISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIKSTP

--------------------------------------------------------------
>16492_16492_3_CHID1-LSP1_CHID1_chr11_899339_ENST00000436108_LSP1_chr11_1901316_ENST00000311604_length(transcript)=2283nt_BP=812nt
GCGCTGGAGCGTTTTCCGGCCGTGCGTTTGTGGCCGTCCGGCCTCCCTGACATGCAGATTTCCACCCAGAAGACAGAGAAGGAGCCAGTG
GTCATGGAATGGGCTGGGGTCAAAGACTGGGTGCCTGGGAGCTGAGGCAGCCACCGTTTCAGCCTGGCCAGCCCTCTGGACCCCGAGGTT
GGACCCTACTGTGACACACCTACCATGCGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCA
AAGTCAGATGCCAAAAAAGCCGCCTCAAAGACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTG
ACGGACCTCAAAGCTGAGAGTGTGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTG
GGCTATGTCACTCCATGGAACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG
CTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAG
GGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAG
CTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGC
GTGCCCACTGCTCAGTGGAGCGTGGAGGACGAGGAGGAGGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAG
GACGAGGAGGGAGGCGGCCATGTCCCCGAGCGGCCGAAGCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAG
GACGAGGGCTTTGGCGACTGGTCCCAGAGGCCAGAGCAGCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCC
CAGTGCAGGAGTCCTGAGGGGGAGCAAGAGGACAGGCCCGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAG
TTGAGTCTGAGCAAGGAGGGGCCAGGCCCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCAC
CAGAAATGTCAGCAGCCCAGGACACCCAGCCCCTTGGTCTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAA
CTCATCGACAGGACCGAGTCCCTAAACCGCTCCATAGAGAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATT
GATCAGTGGCTGGAACAATACACCCAGGCCATCGAGACCGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGC
ATGGCTGTGGCCAGTACCAAGAGTCGGTGGGAGACGGGTGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTG
GCTGGAGACATGAGCAAGAAAAGCCTCTGGGAGCAGAAGGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGG
TATAAGTTTGTGGCCACCGGGCATGGGAAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGG
GTCTGCAGGTCCAGCCGGCTGGCACCCTCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCT
TCCTGTTGCCAGCATGACCTACCCTCGCCTCTTTGATGCCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTT
CCACTCTCTGACCACCGCCCCCGCCCTCCCCACCCAGCTCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAG
GGACTTACCCCTGGAGAGGCCAAGTGCCTTCTAGGAAGTTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGAT
CCAAGGAGAAACTGCAGGTCAAGGGCTGATAACGGCCATGCAGGATGCTTGATGCTGCGTCCCCCGCTGCTTGCCGCCCCCCACCCCGCC

>16492_16492_3_CHID1-LSP1_CHID1_chr11_899339_ENST00000436108_LSP1_chr11_1901316_ENST00000311604_length(amino acids)=541AA_BP=220
MASPLDPEVGPYCDTPTMRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKAR
DRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNV
LDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVPTAQWSVEDEEEAVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLK
PSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAA
GAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLA
RQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPA

--------------------------------------------------------------
>16492_16492_4_CHID1-LSP1_CHID1_chr11_899339_ENST00000436108_LSP1_chr11_1901316_ENST00000381775_length(transcript)=2283nt_BP=812nt
GCGCTGGAGCGTTTTCCGGCCGTGCGTTTGTGGCCGTCCGGCCTCCCTGACATGCAGATTTCCACCCAGAAGACAGAGAAGGAGCCAGTG
GTCATGGAATGGGCTGGGGTCAAAGACTGGGTGCCTGGGAGCTGAGGCAGCCACCGTTTCAGCCTGGCCAGCCCTCTGGACCCCGAGGTT
GGACCCTACTGTGACACACCTACCATGCGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCA
AAGTCAGATGCCAAAAAAGCCGCCTCAAAGACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTG
ACGGACCTCAAAGCTGAGAGTGTGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTG
GGCTATGTCACTCCATGGAACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG
CTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAG
GGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAG
CTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGC
GTGCCCACTGCTCAGTGGAGCGTGGAGGACGAGGAGGAGGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAG
GACGAGGAGGGAGGCGGCCATGTCCCCGAGCGGCCGAAGCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAG
GACGAGGGCTTTGGCGACTGGTCCCAGAGGCCAGAGCAGCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCC
CAGTGCAGGAGTCCTGAGGGGGAGCAAGAGGACAGGCCCGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAG
TTGAGTCTGAGCAAGGAGGGGCCAGGCCCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCAC
CAGAAATGTCAGCAGCCCAGGACACCCAGCCCCTTGGTCTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAA
CTCATCGACAGGACCGAGTCCCTAAACCGCTCCATAGAGAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATT
GATCAGTGGCTGGAACAATACACCCAGGCCATCGAGACCGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGC
ATGGCTGTGGCCAGTACCAAGAGTCGGTGGGAGACGGGTGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTG
GCTGGAGACATGAGCAAGAAAAGCCTCTGGGAGCAGAAGGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGG
TATAAGTTTGTGGCCACCGGGCATGGGAAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGG
GTCTGCAGGTCCAGCCGGCTGGCACCCTCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCT
TCCTGTTGCCAGCATGACCTACCCTCGCCTCTTTGATGCCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTT
CCACTCTCTGACCACCGCCCCCGCCCTCCCCACCCAGCTCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAG
GGACTTACCCCTGGAGAGGCCAAGTGCCTTCTAGGAAGTTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGAT
CCAAGGAGAAACTGCAGGTCAAGGGCTGATAACGGCCATGCAGGATGCTTGATGCTGCGTCCCCCGCTGCTTGCCGCCCCCCACCCCGCC

>16492_16492_4_CHID1-LSP1_CHID1_chr11_899339_ENST00000436108_LSP1_chr11_1901316_ENST00000381775_length(amino acids)=541AA_BP=220
MASPLDPEVGPYCDTPTMRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKAR
DRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNV
LDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVPTAQWSVEDEEEAVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLK
PSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAA
GAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLA
RQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPA

--------------------------------------------------------------
>16492_16492_5_CHID1-LSP1_CHID1_chr11_899339_ENST00000449825_LSP1_chr11_1901316_ENST00000311604_length(transcript)=2436nt_BP=965nt
CTGGTGTGTGTCCCTCTCTTCCTGGGCTTCCGGCCTCTGAACTAGAATGTTTCAAGGCCTAGGAGTGACAGGACGTGGTCAGCAATAGTG
GCCCAGGTCCTGCCCTTGGGTGACCCAGGCCAAGGTCTCCTAGTTAGAACAGGACAGAGTCACGAGGCTGCCACTGTTGGGAAGGGCCCT
GCCTGTGCTGACTCTGCAAATGAGGAGTCGCCCAGAGCCGCCGCGACCCCACCCAGGAGCACTGGCCAGCCTGGGGAAGACACAAACCCA
GCCCCAAAGGCCCCACAGCCACCAGGCACCTCCAACAACCAGGTCCCTCTGGACCCCGAGGTTGGACCCTACTGTGACACACCTACCATG
CGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCA
AAGACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTGACGGACCTCAAAGCTGAGAGTGTGGTT
CTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACAGCCAT
GGCTACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTT
GAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTG
TTTGAGGACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCA
AAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGCCCACTGCTCAGTGGAGCGTGGAG
GACGAGGAGGAGGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAGGACGAGGAGGGAGGCGGCCATGTCCCC
GAGCGGCCGAAGCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGACTGGTCCCAG
AGGCCAGAGCAGCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCCCAGTGCAGGAGTCCTGAGGGGGAGCAA
GAGGACAGGCCCGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGCCAGGC
CCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCACCAGAAATGTCAGCAGCCCAGGACACCC
AGCCCCTTGGTCTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAACTCATCGACAGGACCGAGTCCCTAAAC
CGCTCCATAGAGAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATTGATCAGTGGCTGGAACAATACACCCAG
GCCATCGAGACCGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGTGGCCAGTACCAAGAGTCGG
TGGGAGACGGGTGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTGGCTGGAGACATGAGCAAGAAAAGCCTC
TGGGAGCAGAAGGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGGTATAAGTTTGTGGCCACCGGGCATGGG
AAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGGGTCTGCAGGTCCAGCCGGCTGGCACCC
TCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCTTCCTGTTGCCAGCATGACCTACCCTCG
CCTCTTTGATGCCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTTCCACTCTCTGACCACCGCCCCCGCCCT
CCCCACCCAGCTCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAGGGACTTACCCCTGGAGAGGCCAAGTGC
CTTCTAGGAAGTTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGATCCAAGGAGAAACTGCAGGTCAAGGGCT
GATAACGGCCATGCAGGATGCTTGATGCTGCGTCCCCCGCTGCTTGCCGCCCCCCACCCCGCCATTTTGTATAATAAAGCTCCCTGTGTA

>16492_16492_5_CHID1-LSP1_CHID1_chr11_899339_ENST00000449825_LSP1_chr11_1901316_ENST00000311604_length(amino acids)=610AA_BP=289
MPLGDPGQGLLVRTGQSHEAATVGKGPACADSANEESPRAAATPPRSTGQPGEDTNPAPKAPQPPGTSNNQVPLDPEVGPYCDTPTMRTL
FNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYD
VTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQ
HFDGFVVEVWNQLLSQKRVPTAQWSVEDEEEAVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPE
QRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPL
VLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWET

--------------------------------------------------------------
>16492_16492_6_CHID1-LSP1_CHID1_chr11_899339_ENST00000449825_LSP1_chr11_1901316_ENST00000381775_length(transcript)=2436nt_BP=965nt
CTGGTGTGTGTCCCTCTCTTCCTGGGCTTCCGGCCTCTGAACTAGAATGTTTCAAGGCCTAGGAGTGACAGGACGTGGTCAGCAATAGTG
GCCCAGGTCCTGCCCTTGGGTGACCCAGGCCAAGGTCTCCTAGTTAGAACAGGACAGAGTCACGAGGCTGCCACTGTTGGGAAGGGCCCT
GCCTGTGCTGACTCTGCAAATGAGGAGTCGCCCAGAGCCGCCGCGACCCCACCCAGGAGCACTGGCCAGCCTGGGGAAGACACAAACCCA
GCCCCAAAGGCCCCACAGCCACCAGGCACCTCCAACAACCAGGTCCCTCTGGACCCCGAGGTTGGACCCTACTGTGACACACCTACCATG
CGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCA
AAGACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTGACGGACCTCAAAGCTGAGAGTGTGGTT
CTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACAGCCAT
GGCTACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTT
GAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTG
TTTGAGGACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCA
AAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGCCCACTGCTCAGTGGAGCGTGGAG
GACGAGGAGGAGGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAGGACGAGGAGGGAGGCGGCCATGTCCCC
GAGCGGCCGAAGCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGACTGGTCCCAG
AGGCCAGAGCAGCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCCCAGTGCAGGAGTCCTGAGGGGGAGCAA
GAGGACAGGCCCGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGCCAGGC
CCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCACCAGAAATGTCAGCAGCCCAGGACACCC
AGCCCCTTGGTCTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAACTCATCGACAGGACCGAGTCCCTAAAC
CGCTCCATAGAGAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATTGATCAGTGGCTGGAACAATACACCCAG
GCCATCGAGACCGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGTGGCCAGTACCAAGAGTCGG
TGGGAGACGGGTGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTGGCTGGAGACATGAGCAAGAAAAGCCTC
TGGGAGCAGAAGGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGGTATAAGTTTGTGGCCACCGGGCATGGG
AAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGGGTCTGCAGGTCCAGCCGGCTGGCACCC
TCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCTTCCTGTTGCCAGCATGACCTACCCTCG
CCTCTTTGATGCCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTTCCACTCTCTGACCACCGCCCCCGCCCT
CCCCACCCAGCTCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAGGGACTTACCCCTGGAGAGGCCAAGTGC
CTTCTAGGAAGTTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGATCCAAGGAGAAACTGCAGGTCAAGGGCT
GATAACGGCCATGCAGGATGCTTGATGCTGCGTCCCCCGCTGCTTGCCGCCCCCCACCCCGCCATTTTGTATAATAAAGCTCCCTGTGTA

>16492_16492_6_CHID1-LSP1_CHID1_chr11_899339_ENST00000449825_LSP1_chr11_1901316_ENST00000381775_length(amino acids)=610AA_BP=289
MPLGDPGQGLLVRTGQSHEAATVGKGPACADSANEESPRAAATPPRSTGQPGEDTNPAPKAPQPPGTSNNQVPLDPEVGPYCDTPTMRTL
FNLLWLALACSPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYD
VTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQ
HFDGFVVEVWNQLLSQKRVPTAQWSVEDEEEAVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPE
QRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPL
VLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWET

--------------------------------------------------------------
>16492_16492_7_CHID1-LSP1_CHID1_chr11_899339_ENST00000454838_LSP1_chr11_1901316_ENST00000311604_length(transcript)=2261nt_BP=790nt
GAGGGGTTGCCCATGTGCTGCATTTCTCTGCCGGTTGTTTGAATGTGCTCTGCTTTCCCTGCAGCCCTCTGGACCCCGAGGTTGGACCCT
ACTGTGACACACCTACCATGCGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAAGTCAG
ATGCCAAAAAAGCCGCCTCAAAGACGCTGCTGGAGAAGGTGAAGTTTTGCTCTTGTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGGC
TCACCGCAACCTCTGCCACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTGACGGACCTCAAAGCTGAGAGTG
TGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACA
GCCATGGCTACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGA
TGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGC
TCCTGTTTGAGGACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG
TGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGCCCACTGCTCAGTGGAGCG
TGGAGGACGAGGAGGAGGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAGGACGAGGAGGGAGGCGGCCATG
TCCCCGAGCGGCCGAAGCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGACTGGT
CCCAGAGGCCAGAGCAGCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCCCAGTGCAGGAGTCCTGAGGGGG
AGCAAGAGGACAGGCCCGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGC
CAGGCCCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCACCAGAAATGTCAGCAGCCCAGGA
CACCCAGCCCCTTGGTCTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAACTCATCGACAGGACCGAGTCCC
TAAACCGCTCCATAGAGAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATTGATCAGTGGCTGGAACAATACA
CCCAGGCCATCGAGACCGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGTGGCCAGTACCAAGA
GTCGGTGGGAGACGGGTGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTGGCTGGAGACATGAGCAAGAAAA
GCCTCTGGGAGCAGAAGGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGGTATAAGTTTGTGGCCACCGGGC
ATGGGAAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGGGTCTGCAGGTCCAGCCGGCTGG
CACCCTCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCTTCCTGTTGCCAGCATGACCTAC
CCTCGCCTCTTTGATGCCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTTCCACTCTCTGACCACCGCCCCC
GCCCTCCCCACCCAGCTCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAGGGACTTACCCCTGGAGAGGCCA
AGTGCCTTCTAGGAAGTTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGATCCAAGGAGAAACTGCAGGTCAA
GGGCTGATAACGGCCATGCAGGATGCTTGATGCTGCGTCCCCCGCTGCTTGCCGCCCCCCACCCCGCCATTTTGTATAATAAAGCTCCCT

>16492_16492_7_CHID1-LSP1_CHID1_chr11_899339_ENST00000454838_LSP1_chr11_1901316_ENST00000311604_length(amino acids)=579AA_BP=69
MHFSAGCLNVLCFPCSPLDPEVGPYCDTPTMRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKVKFCSCCPGWSAMARSWLTATSA
TQSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTG
LHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVPTAQWSVEDEEE
AVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP
GLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIE
KSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQK

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>16492_16492_8_CHID1-LSP1_CHID1_chr11_899339_ENST00000454838_LSP1_chr11_1901316_ENST00000381775_length(transcript)=2261nt_BP=790nt
GAGGGGTTGCCCATGTGCTGCATTTCTCTGCCGGTTGTTTGAATGTGCTCTGCTTTCCCTGCAGCCCTCTGGACCCCGAGGTTGGACCCT
ACTGTGACACACCTACCATGCGGACACTCTTCAACCTCCTCTGGCTTGCCCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAAGTCAG
ATGCCAAAAAAGCCGCCTCAAAGACGCTGCTGGAGAAGGTGAAGTTTTGCTCTTGTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGGC
TCACCGCAACCTCTGCCACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTCGTGACGGACCTCAAAGCTGAGAGTG
TGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACA
GCCATGGCTACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGA
TGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGC
TCCTGTTTGAGGACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG
TGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGCCCACTGCTCAGTGGAGCG
TGGAGGACGAGGAGGAGGCCGTCCACGAGCAATGCCAGCATGAGAGAGACAGGCAGCTTCAGGCCCAGGACGAGGAGGGAGGCGGCCATG
TCCCCGAGCGGCCGAAGCAGGAGATGCTCCTCAGCCTGAAGCCCTCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGACTGGT
CCCAGAGGCCAGAGCAGCGGCAGCAGCACGAGGGGGCGCAGGGCGCCTTGGACAGCGGAGAGCCCCCCCAGTGCAGGAGTCCTGAGGGGG
AGCAAGAGGACAGGCCCGGCCTGCATGCCTACGAAAAGGAGGACAGTGATGAAGTCCACCTGGAGGAGTTGAGTCTGAGCAAGGAGGGGC
CAGGCCCAGAGGACACTGTCCAGGACAACCTGGGGGCCGCAGGGGCTGAGGAGGAACAGGAGGAGCACCAGAAATGTCAGCAGCCCAGGA
CACCCAGCCCCTTGGTCTTGGAGGGGACCATCGAACAGAGCTCGCCTCCCCTGAGCCCTACCACCAAACTCATCGACAGGACCGAGTCCC
TAAACCGCTCCATAGAGAAGAGTAACAGTGTGAAGAAATCCCAGCCAGACTTGCCCATCTCCAAGATTGATCAGTGGCTGGAACAATACA
CCCAGGCCATCGAGACCGCTGGCCGGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGTGGCCAGTACCAAGA
GTCGGTGGGAGACGGGTGAGGTACAGGCTCAGTCTGCGGCCAAGACTCCGTCCTGCAAGGATATTGTGGCTGGAGACATGAGCAAGAAAA
GCCTCTGGGAGCAGAAGGGAGGCTCCAAGACCTCATCAACAATTAAGAGCACCCCATCTGGGAAGAGGTATAAGTTTGTGGCCACCGGGC
ATGGGAAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGGCGTCCCATCTCGCTTCCTGGGTCTGCAGGTCCAGCCGGCTGG
CACCCTCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGCCCCCCGGCCCTGGCTAAGAAGTTGCTTCCTGTTGCCAGCATGACCTAC
CCTCGCCTCTTTGATGCCATCCGCTGCCACCTCCTTTTGCTCCTGGACCCTTTAGCCTCTCTGCCCTTCCACTCTCTGACCACCGCCCCC
GCCCTCCCCACCCAGCTCCGCTTCTTGTTACTTGGGGGAGGAAAGAAACTCCTGATCATTGGCCAAAGGGACTTACCCCTGGAGAGGCCA
AGTGCCTTCTAGGAAGTTAGGAGGTTGAGGCACAGCCTGTGCAGAGAGGGTGGGTCACCCCCCCAGATCCAAGGAGAAACTGCAGGTCAA
GGGCTGATAACGGCCATGCAGGATGCTTGATGCTGCGTCCCCCGCTGCTTGCCGCCCCCCACCCCGCCATTTTGTATAATAAAGCTCCCT

>16492_16492_8_CHID1-LSP1_CHID1_chr11_899339_ENST00000454838_LSP1_chr11_1901316_ENST00000381775_length(amino acids)=579AA_BP=69
MHFSAGCLNVLCFPCSPLDPEVGPYCDTPTMRTLFNLLWLALACSPVHTTLSKSDAKKAASKTLLEKVKFCSCCPGWSAMARSWLTATSA
TQSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTG
LHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVPTAQWSVEDEEE
AVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP
GLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIE
KSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQK

--------------------------------------------------------------

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Fusion Gene PPI Analysis for CHID1-LSP1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for CHID1-LSP1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for CHID1-LSP1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource