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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:CHST11-HCFC2 (FusionGDB2 ID:16682) |
Fusion Gene Summary for CHST11-HCFC2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CHST11-HCFC2 | Fusion gene ID: 16682 | Hgene | Tgene | Gene symbol | CHST11 | HCFC2 | Gene ID | 50515 | 29915 |
| Gene name | carbohydrate sulfotransferase 11 | host cell factor C2 | |
| Synonyms | C4ST|C4ST-1|C4ST1|HSA269537|OCBMD | HCF-2|HCF2 | |
| Cytomap | 12q23.3 | 12q23.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | carbohydrate sulfotransferase 11C4S-1IgH/CHST11 fusioncarbohydrate (chondroitin 4) sulfotransferase 11chondroitin 4-O-sulfotransferase 1 | host cell factor 2C2 factor | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | Q9Y5Z7 | |
| Ensembl transtripts involved in fusion gene | ENST00000303694, ENST00000546689, ENST00000547956, ENST00000549260, ENST00000550711, | ENST00000550335, ENST00000229330, | |
| Fusion gene scores | * DoF score | 13 X 8 X 6=624 | 4 X 8 X 4=128 |
| # samples | 15 | 5 | |
| ** MAII score | log2(15/624*10)=-2.05658352836637 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/128*10)=-1.35614381022528 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CHST11 [Title/Abstract] AND HCFC2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | CHST11(104851292)-HCFC2(104459945), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | CHST11 | GO:0030206 | chondroitin sulfate biosynthetic process | 11056388 |
| Fusion gene breakpoints across CHST11 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across HCFC2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | HNSC | TCGA-CV-7416-01A | CHST11 | chr12 | 104851292 | - | HCFC2 | chr12 | 104459945 | + |
| ChimerDB4 | HNSC | TCGA-CV-7416-01A | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
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Fusion Gene ORF analysis for CHST11-HCFC2 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-intron | ENST00000303694 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000546689 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000547956 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000549260 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000303694 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000546689 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000547956 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000549260 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| intron-3CDS | ENST00000550711 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| intron-intron | ENST00000550711 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000547956 | CHST11 | chr12 | 104851292 | + | ENST00000229330 | HCFC2 | chr12 | 104459945 | + | 3819 | 15 | 2 | 2230 | 742 |
| ENST00000549260 | CHST11 | chr12 | 104851292 | + | ENST00000229330 | HCFC2 | chr12 | 104459945 | + | 4348 | 544 | 12 | 2759 | 915 |
| ENST00000303694 | CHST11 | chr12 | 104851292 | + | ENST00000229330 | HCFC2 | chr12 | 104459945 | + | 3819 | 15 | 2 | 2230 | 742 |
| ENST00000546689 | CHST11 | chr12 | 104851292 | + | ENST00000229330 | HCFC2 | chr12 | 104459945 | + | 4318 | 514 | 291 | 2729 | 812 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000547956 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + | 0.00015756 | 0.9998424 |
| ENST00000549260 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + | 0.000168041 | 0.9998319 |
| ENST00000303694 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + | 0.00015756 | 0.9998424 |
| ENST00000546689 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + | 0.000166704 | 0.9998332 |
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Fusion Genomic Features for CHST11-HCFC2 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459944 | + | 0.001460382 | 0.9985397 |
| CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459944 | + | 0.001460382 | 0.9985397 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
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| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for CHST11-HCFC2 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr12:104851292/chr12:104459945) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | HCFC2 |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 1_16 | 34 | 348.0 | Topological domain | Cytoplasmic |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 17_37 | 34 | 348.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 359_449 | 54 | 793.0 | Domain | Fibronectin type-III 1 | |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 583_675 | 54 | 793.0 | Domain | Fibronectin type-III 2 | |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 677_787 | 54 | 793.0 | Domain | Fibronectin type-III 3 | |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 207_255 | 54 | 793.0 | Repeat | Note=Kelch 3 | |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 257_303 | 54 | 793.0 | Repeat | Note=Kelch 4 | |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 83_130 | 54 | 793.0 | Repeat | Note=Kelch 2 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 124_130 | 0 | 353.0 | Nucleotide binding | PAPS |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 186_194 | 0 | 353.0 | Nucleotide binding | PAPS |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 124_130 | 34 | 348.0 | Nucleotide binding | PAPS |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 186_194 | 34 | 348.0 | Nucleotide binding | PAPS |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 1_16 | 0 | 353.0 | Topological domain | Cytoplasmic |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 38_352 | 0 | 353.0 | Topological domain | Lumenal |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 38_352 | 34 | 348.0 | Topological domain | Lumenal |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 17_37 | 0 | 353.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | 0 | 15 | 34_79 | 54 | 793.0 | Repeat | Note=Kelch 1 |
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Fusion Gene Sequence for CHST11-HCFC2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >16682_16682_1_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000303694_HCFC2_chr12_104459945_ENST00000229330_length(transcript)=3819nt_BP=15nt GTATGTTGCACCCAGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTG ATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTAT GGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCT ATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGC ATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCA AAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTA TGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTT TTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAA ATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTG CTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTT GGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAG TGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGC AAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAAC AGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCAT CAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTA GTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTA AAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACAT ATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCA CAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAG GGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACA GATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAG CTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAAT ATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACAT CATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATG AAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAG CTATTGTGATGATGATTATTTATTAGTAACTGGTTATGAAGATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGA ACTTGAGTTTGTAAATTGTTCTTAAAATGTATTTGCTGAATTATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTA TATGAGTTCTTCCTTACAGATATAGCTCTTTTATAAAGAAAAACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCT TTTATAAGGGCTGTGTAACCCAGTCATCCTAGAGTTATTGAGATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAA ATGTTCTCTACATTGTAAATGTCCTACCTTTGAGTACTCCTTCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTAT TGGATAATATGTGTGATACTATAATAATTCTAATAGTTATTTGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAA AGAGGCAAGTTTAGAAACTGCTTTTGAACTTTTATTATTTTCCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCT TACCAGGCCAATATATTTGAATATATTTTTGGCCAAAGCACTTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAG CAGTTTATCTTTTAGGTCCCTTTCAGCACTAAGGTTTTGTGTTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAAT GGCTCTAATTTTGCTTTTGCTAAAATTAAAATCTTCATAATTGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGC ACCTTAACAGGACACAAGTTTTAAAATAGTGTTTTAAACATTTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTT TACCTTGAAATTGTATAAACTTTTTTACTATGAAAATATAAGCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATA GGCATTATAAACACTCTGCTACAGGTAACTTGTTTTAAACCTTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATAT ACAGAGCAATAATTGCAGAAAAGATATTTCAAACTAAGAGCTTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACC TTATGCCAGTTTAGGTTGACTGAGTAGCTATGTCCTCAAATTTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTG ATATATATGTGTGTTCCAGTTACTAATTTAAAGTGTATAGAATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAG TATTTGTAATTAATGTGTCTCACTAATTAAGTTTCTCTTGAAGAAAATATGCAAATTGTTAGACACATAATGAGTGGTTTCCAAACTCTA >16682_16682_1_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000303694_HCFC2_chr12_104459945_ENST00000229330_length(amino acids)=742AA_BP=4 MLHPATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCY LFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETM SWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCA VAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQ GVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSS CLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPFSKETPSNPVAT VKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGA PSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNE -------------------------------------------------------------- >16682_16682_2_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000546689_HCFC2_chr12_104459945_ENST00000229330_length(transcript)=4318nt_BP=514nt GCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGGCGGCGGCACCACCATCACCGCTCGCACC CCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGC AGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGC GAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGC GCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGA ATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCAAACTACGAATCAGTGGTTTCTGCCAGCT GTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATAT GGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCT CCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAAC AATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAA GGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGA ATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTT CCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACT TCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCT CAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGA GATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTA CAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGAC TTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAAC ATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGAC TTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTA AGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTA TCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGAT GAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACAT GCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATT TTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCT GACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCT TTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATC CACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGAT AATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATT GATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAA GGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAGCTATTGTGATGATGATTATTTATTAGTAACTGGTTATGAAG ATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGAACTTGAGTTTGTAAATTGTTCTTAAAATGTATTTGCTGAAT TATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTATATGAGTTCTTCCTTACAGATATAGCTCTTTTATAAAGAAA AACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCTTTTATAAGGGCTGTGTAACCCAGTCATCCTAGAGTTATTGA GATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAAATGTTCTCTACATTGTAAATGTCCTACCTTTGAGTACTCCT TCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTATTGGATAATATGTGTGATACTATAATAATTCTAATAGTTATT TGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAAAGAGGCAAGTTTAGAAACTGCTTTTGAACTTTTATTATTTT CCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCTTACCAGGCCAATATATTTGAATATATTTTTGGCCAAAGCAC TTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAGCAGTTTATCTTTTAGGTCCCTTTCAGCACTAAGGTTTTGTG TTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAATGGCTCTAATTTTGCTTTTGCTAAAATTAAAATCTTCATAAT TGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGCACCTTAACAGGACACAAGTTTTAAAATAGTGTTTTAAACAT TTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTTTACCTTGAAATTGTATAAACTTTTTTACTATGAAAATATAA GCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATAGGCATTATAAACACTCTGCTACAGGTAACTTGTTTTAAACC TTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATATACAGAGCAATAATTGCAGAAAAGATATTTCAAACTAAGAGC TTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACCTTATGCCAGTTTAGGTTGACTGAGTAGCTATGTCCTCAAAT TTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTGATATATATGTGTGTTCCAGTTACTAATTTAAAGTGTATAGA ATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAGTATTTGTAATTAATGTGTCTCACTAATTAAGTTTCTCTTGA >16682_16682_2_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000546689_HCFC2_chr12_104459945_ENST00000229330_length(amino acids)=812AA_BP=75 MSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQTTNQWFLPAVRGDIPP GCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYL NDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTA SVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKAL NSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSIN DTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVIPETSVSSTVSST QTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTAL VSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPP TSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVRWLQGNNKKAP -------------------------------------------------------------- >16682_16682_3_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000547956_HCFC2_chr12_104459945_ENST00000229330_length(transcript)=3819nt_BP=15nt GTATGTTGCACCCAGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTG ATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTAT GGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCT ATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGC ATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCA AAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTA TGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTT TTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAA ATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTG CTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTT GGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAG TGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGC AAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAAC AGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCAT CAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTA GTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTA AAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACAT ATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCA CAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAG GGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACA GATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAG CTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAAT ATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACAT CATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATG AAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAG CTATTGTGATGATGATTATTTATTAGTAACTGGTTATGAAGATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGA ACTTGAGTTTGTAAATTGTTCTTAAAATGTATTTGCTGAATTATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTA TATGAGTTCTTCCTTACAGATATAGCTCTTTTATAAAGAAAAACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCT TTTATAAGGGCTGTGTAACCCAGTCATCCTAGAGTTATTGAGATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAA ATGTTCTCTACATTGTAAATGTCCTACCTTTGAGTACTCCTTCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTAT TGGATAATATGTGTGATACTATAATAATTCTAATAGTTATTTGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAA AGAGGCAAGTTTAGAAACTGCTTTTGAACTTTTATTATTTTCCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCT TACCAGGCCAATATATTTGAATATATTTTTGGCCAAAGCACTTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAG CAGTTTATCTTTTAGGTCCCTTTCAGCACTAAGGTTTTGTGTTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAAT GGCTCTAATTTTGCTTTTGCTAAAATTAAAATCTTCATAATTGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGC ACCTTAACAGGACACAAGTTTTAAAATAGTGTTTTAAACATTTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTT TACCTTGAAATTGTATAAACTTTTTTACTATGAAAATATAAGCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATA GGCATTATAAACACTCTGCTACAGGTAACTTGTTTTAAACCTTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATAT ACAGAGCAATAATTGCAGAAAAGATATTTCAAACTAAGAGCTTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACC TTATGCCAGTTTAGGTTGACTGAGTAGCTATGTCCTCAAATTTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTG ATATATATGTGTGTTCCAGTTACTAATTTAAAGTGTATAGAATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAG TATTTGTAATTAATGTGTCTCACTAATTAAGTTTCTCTTGAAGAAAATATGCAAATTGTTAGACACATAATGAGTGGTTTCCAAACTCTA >16682_16682_3_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000547956_HCFC2_chr12_104459945_ENST00000229330_length(amino acids)=742AA_BP=4 MLHPATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCY LFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETM SWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCA VAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQ GVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSS CLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPFSKETPSNPVAT VKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGA PSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNE -------------------------------------------------------------- >16682_16682_4_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000549260_HCFC2_chr12_104459945_ENST00000229330_length(transcript)=4348nt_BP=544nt ATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGC GGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCG GAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCT GCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTC CGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCA GCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTC CAAACTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGATGGTACCAGA ATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGGAAAAAAGTG AAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTATTTGTTTGGT GGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCATGGCTCTGGT GTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAAAAAGATTCT GGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATGTCATGGTCA AAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTTGGTGGATGG GTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAATCTGGATACA ACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCTGTTGCAATC GGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGGTATCTTGAT ACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTGTCTACAGTT GAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAAGGAGTCAGG ATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAGCCAGCCACA AAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCAAATGCTTCT AATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGTTGCCTGGAT GTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAAACTGAATCA TCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATATGCACTGCCT GCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCG GGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGGAAGCAAAGC ATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGATTCAGGGTT GCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCTCCTTCTGCA GTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATATTCAGCCTAC TTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCATGTATAGTA ACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAAAAGGGATAT GGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAGCTATTGTGATG ATGATTATTTATTAGTAACTGGTTATGAAGATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGAACTTGAGTTTG TAAATTGTTCTTAAAATGTATTTGCTGAATTATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTATATGAGTTCTT CCTTACAGATATAGCTCTTTTATAAAGAAAAACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCTTTTATAAGGGC TGTGTAACCCAGTCATCCTAGAGTTATTGAGATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAAATGTTCTCTAC ATTGTAAATGTCCTACCTTTGAGTACTCCTTCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTATTGGATAATATG TGTGATACTATAATAATTCTAATAGTTATTTGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAAAGAGGCAAGTT TAGAAACTGCTTTTGAACTTTTATTATTTTCCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCTTACCAGGCCAA TATATTTGAATATATTTTTGGCCAAAGCACTTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAGCAGTTTATCTT TTAGGTCCCTTTCAGCACTAAGGTTTTGTGTTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAATGGCTCTAATTT TGCTTTTGCTAAAATTAAAATCTTCATAATTGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGCACCTTAACAGG ACACAAGTTTTAAAATAGTGTTTTAAACATTTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTTTACCTTGAAAT TGTATAAACTTTTTTACTATGAAAATATAAGCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATAGGCATTATAAA CACTCTGCTACAGGTAACTTGTTTTAAACCTTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATATACAGAGCAATA ATTGCAGAAAAGATATTTCAAACTAAGAGCTTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACCTTATGCCAGTT TAGGTTGACTGAGTAGCTATGTCCTCAAATTTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTGATATATATGTG TGTTCCAGTTACTAATTTAAAGTGTATAGAATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAGTATTTGTAATT AATGTGTCTCACTAATTAAGTTTCTCTTGAAGAAAATATGCAAATTGTTAGACACATAATGAGTGGTTTCCAAACTCTAAAGATAAAATA >16682_16682_4_CHST11-HCFC2_CHST11_chr12_104851292_ENST00000549260_HCFC2_chr12_104459945_ENST00000229330_length(amino acids)=915AA_BP=178 MERNEVAFGEKGEGPSDSHSGQRSGSGGGTTITARTPAARPATRQRRPPAGSEEAAERRGGGAGARSQRVHASQHFQTNSGTFHTPARAG GSESGREATPILPLSLAQLCPAPPGLRSARRGPCSCAPGALPGHPGPRSQDKAMKPALLEVMRMNRICRMVLATCLGSFILVIFYFQTTN QWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLAN ESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPET KGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRL YFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPH RQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTV IPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPFSKETPSNPVATVKAGERQ WCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRIS KNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPAT -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CHST11-HCFC2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CHST11-HCFC2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CHST11-HCFC2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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